@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF07714_MERTK_HUMAN: (2014-10-13 )
MGPAPLPLLLGLFLPALWRRAITEAREEAKPYPLFPGPFPGSLQTDHTPLLSLPHASGYQPALMFSPTQPGRPHTGNVAIPQVTSVESKPLPPLAFKHTVGHIILSEHKGVKFNCSISVPNIYQDTTISWWKDGKELLGAHHAITQFYPDDEVTAIIASFSITSVQRSDNGSYICKMKINNEEIVSDPIYIEVQGLPHFTKQPESMNVTRNTAFNLTCQAVGPPEPVNIFWVQNSSRVNEQPEKSPSVLTVPGLTEMAVFSCEAHNDKGLTVSKGVQINIKAIPSPPTEVSIRNSTAHSILISWVPGFDGYSPFRNCSIQVKEADPLSNGSVMIFNTSALPHLYQIKQLQALANYSIGVSCMNEIGWSAVSPWILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEEVGQNGSRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHGWVDYAPSSTPAPGNADPVLIIFGCFCGFILIGLILYISLAIRKRVQETKFGNAFTEEDSELVVNYIAKKSFCRRAIELTLHSLGVSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPDVRNQADVIYVNTQLLESSEGLAQGSTLAPLDLNIDPDSIIASCTPRAAISVVTAEVHDSKPHEGRYILNGGSEEWEDLTSAPSAAVTAEKNSVLPGERLVRNGVSWSHSSMLPLGSSLPDELLFADDSSEGSEVLM

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CKJ_A_3(3TCP)
MERTK_HUMAN
[Raw transfer]



0T8_A_2(4FEQ)

[Raw transfer]



0JL_A_2(4DEI)

[Raw transfer]



CKJ_B_7(3TCP)

[Raw transfer]



0JK_A_2(4DEH)

[Raw transfer]



044_A_2(3U6I)

[Raw transfer]



24K_B_12(4M3Q)

[Raw transfer]



OLP_A_8(3BPR)
MERTK_HUMAN
[Raw transfer]



LUN_A_2(3QUP)

[Raw transfer]



OLP_B_9(3BPR)
MERTK_HUMAN
[Raw transfer]



ZZY_A_2(2WD1)

[Raw transfer]



ADP_B_11(3BRB)

[Raw transfer]



PFY_A_2(2WKM)

[Raw transfer]



0JJ_A_2(4DEG)

[Raw transfer]



B2D_A_2(3I5N)

[Raw transfer]



03X_A_2(3U6H)

[Raw transfer]



ANP_A_6(2P0C)
MERTK_HUMAN
[Raw transfer]



0J8_A_2(4GG7)

[Raw transfer]



L1X_A_2(4EEV)

[Raw transfer]



ANP_B_7(2P0C)

[Raw transfer]



OLP_D_11(3BPR)

[Raw transfer]



0J3_A_2(4GG5)

[Raw transfer]



VGH_A_2(2WGJ)

[Raw transfer]



14S_A_2(4FF8)

[Raw transfer]



M97_A_3(3RHK)
MET_HUMAN
[Raw transfer]



GBL_A_3(2WD1)

[Raw transfer]
23 PsiBlast_CBE 91.44100%-138 - C1 -3BRB 4.5
3 PsiBlast_PDB 89.49100%-148 - C1 -3TCP 7.6 MERTK_HUMAN
1 PsiBlast_PDB 87.85100%-148 - C1 -2P0C 4.5 MERTK_HUMAN
25 PsiBlast_CBE 87.73100%-147 - C1 -3BPR 6.0 MERTK_HUMAN
2 PsiBlast_PDB 87.61100%-144 - C1 -3BPR 5.9 MERTK_HUMAN
24 PsiBlast_CBE 87.39100%-144 - C1 -3BPR 6.0
26 PsiBlast_CBE 86.73100%-148 - C1 -2P0C 4.3
22 PsiBlast_CBE 80.60100%-140 - C1 -3TCP 7.6
21 PsiBlast_CBE 80.15100%-154 - C1 -4M3Q 6.1
4 PsiBlast_PDB 61.9261%-141 - C1 -3QUP 8.5
8 PsiBlast_PDB 50.3744%-118 * C1 *2WD1 6.6
18 PsiBlast_PDB 49.2744%-123 - C1 -4DEI 9.4
16 PsiBlast_PDB 48.9044%-126 - C1 -4DEG 9.6
14 PsiBlast_PDB 48.5844%-122 - C1 -3U6H 11.2
15 PsiBlast_PDB 47.9044%-123 - C1 -3U6I 11.5
10 PsiBlast_PDB 47.7644%-115 - C1 -3RHK 9.2 MET_HUMAN
5 PsiBlast_PDB 47.0861%-134 - C1 -4FEQ 6.9
17 PsiBlast_PDB 46.9944%-123 - C1 -4DEH 8.7
20 PsiBlast_PDB 45.9644%-112 - C1 -2WKM 8.4
19 PsiBlast_PDB 45.9244%-115 - C1 -2WGJ 8.8
13 PsiBlast_PDB 45.7644%-128 - C1 -3I5N 9.6
7 PsiBlast_PDB 45.2044%-125 - C1 -4EEV 12.0
12 PsiBlast_PDB 41.6044%-116 - C1 -4GG7 9.0
11 PsiBlast_PDB 39.0244%-117 - C1 -4GG5 8.9
6 PsiBlast_PDB 10.5961%-132 - C1 -4FF8 5.2