@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF07952_BXA1_CLOBO: (2014-10-14 )
MPFVNKQFNYKDPVNGVDIAYIKIPNVGQMQPVKAFKIHNKIWVIPERDTFTNPEEGDLNPPPEAKQVPVSYYDSTYLSTDNEKDNYLKGVTKLFERIYSTDLGRMLLTSIVRGIPFWGGSTIDTELKVIDTNCINVIQPDGSYRSEELNLVIIGPSADIIQFECKSFGHEVLNLTRNGYGSTQYIRFSPDFTFGFEESLEVDTNPLLGAGKFATDPAVTLAHELIHAGHRLYGIAINPNRVFKVNTNAYYEMSGLEVSFEELRTFGGHDAKFIDSLQENEFRLYYYNKFKDIASTLNKAKSIVGTTASLQYMKNVFKEKYLLSEDTSGKFSVDKLKFDKLYKMLTEIYTEDNFVKFFKVLNRKTYLNFDKAVFKINIVPKVNYTIYDGFNLRNTNLAANFNGQNTEINNMNFTKLKNFTGLFEFYKLLCVRGIITSKTKSLDKGYNKALNDLCIKVNNWDLFFSPSEDNFTNDLNKGEEITSDTNIEAAEENISLDLIQQYYLTFNFDNEPENISIENLSSDIIGQLELMPNIERFPNGKKYELDKYTMFHYLRAQEFEHGKSRIALTNSVNEALLNPSRVYTFFSSDYVKKVNKATEAAMFLGWVEQLVYDFTDETSEVSTTDKIADITIIIPYIGPALNIGNMLYKDDFVGALIFSGAVILLEFIPEIAIPVLGTFALVSYIANKVLTVQTIDNALSKRNEKWDEVYKYIVTNWLAKVNTQIDLIRKKMKEALENQAEATKAIINYQYNQYTEEEKNNINFNIDDLSSKLNESINKAMININKFLNQCSVSYLMNSMIPYGVKRLEDFDASLKDALLKYIYDNRGTLIGQVDRLKDKVNNTLSTDIPFQLSKYVDNQRLLSTFTEYIKNIINTSILNLRYESNHLIDLSRYASKINIGSKVNFDPIDKNQIQLFNLESSKIEVILKNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCMENNSGWKVSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYINRWIFVTITNNRLNNSKIYINGRLIDQKPISNLGNIHASNNIMFKLDGCRDTHRYIWIKYFNLFDKELNEKEIKDLYDNQSNSGILKDFWGDYLQYDKPYYMLNLYDPNKYVDVNNVGIRGYMYLKGPRGSVMTTNIYLNSSLYRGTKFIIKKYASGNKDNIVRNNDRVYINVVVKNKEYRLATNASQAGVEKILSALEIPDVGNLSQVVVMKSKNDQGITNKCKMNLQDNNGNDIGFIGFHQFNNIAKLVASNWYNRQIERSSRTLGCSWEFIPVDDGWGERPL

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

QI3_A_3(3QJ0)
BXA1_CLOBH
[Raw transfer]



GB4_A_5(2IMA)
BXA1_CLOBO
[Raw transfer]



GB5_B_6(2ILP)
BXA1_CLOBO
[Raw transfer]



GB4_B_6(2IMA)
BXA1_CLOBO
[Raw transfer]



QI1_A_3(3QIY)
?
[Raw transfer]



QI2_A_3(3QIZ)
BXA1_CLOBH
[Raw transfer]



AHL_A_5(2IMB)
BXA1_CLOBO
[Raw transfer]



CHAIN_B_2(3QW7)
BXA1_CLOBH
[Raw transfer]
-
CHAIN_B_2(3DS9)
BXA1_CLOBO
[Raw transfer]
-
CHAIN_B_2(3C8A)
BXA1_CLOBO
[Raw transfer]
-
CHAIN_B_2(3QW6)
BXA1_CLOBH
[Raw transfer]
-
CHAIN_B_2(3C8B)
BXA1_CLOBO
[Raw transfer]
-
CHAIN_B_2(3C89)
BXA1_CLOBO
[Raw transfer]
-
CHAIN_B_2(3C88)
BXA1_CLOBO
[Raw transfer]
-
CHAIN_B_2(3QW5)
BXA1_CLOBH
[Raw transfer]
-
EDO_A_4(3QJ0)
BXA1_CLOBH
[Raw transfer]



EDO_A_4(3QIY)
?
[Raw transfer]



CHAIN_B_2(3QW8)
BXA1_CLOBH
[Raw transfer]
-
IMD_A_4(4EL4)
BXA1_CLOBO
[Raw transfer]



CHAIN_B_2(3DDA)
BXA1_CLOBO
[Raw transfer]
-
CHAIN_C_2(3NF3)
?
[Raw transfer]
-
CHAIN_B_2(3DDB)
BXA1_CLOBO
[Raw transfer]
-
CHAIN_B_2(3BOO)
BXA1_CLOBO
[Raw transfer]
-
EDO_A_8(3QW8)
BXA1_CLOBH
[Raw transfer]
26 PsiBlast_CBE 30.0799% -72 - C1 -3BOO 5.7 BXA1_CLOBO
33 PsiBlast_CBE 29.2199% -67 - C1 -4EL4 3.5 BXA1_CLOBO
13 PsiBlast_PDB 28.9199% -69 - C1 -3QW7 6.0 BXA1_CLOBH
9 PsiBlast_PDB 28.7199% -68 - C1 -3DDA 6.4 BXA1_CLOBO
10 PsiBlast_PDB 28.5899% -67 - C1 -3DDB 6.7 BXA1_CLOBO
11 PsiBlast_PDB 28.3999% -68 - C1 -3QW5 6.3 BXA1_CLOBH
38 PsiBlast_CBE 28.3799% -72 - C1 -3NF3 7.2 ?
53 PsiBlast_CBE 28.3599% -70 * C1 *3DS9 10.2 BXA1_CLOBO
16 PsiBlast_PDB 28.3399% -67 - C1 -3C88 5.2 BXA1_CLOBO
12 PsiBlast_PDB 28.2199% -67 - C1 -3QW6 5.8 BXA1_CLOBH
17 PsiBlast_PDB 27.7399% -66 - C1 -3C89 5.8 BXA1_CLOBO
36 PsiBlast_CBE 27.7199% -70 - C1 -3QIY 8.0 ?
14 PsiBlast_PDB 27.7199% -66 - C1 -3QW8 5.0 BXA1_CLOBH
18 PsiBlast_PDB 27.6299% -66 - C1 -3C8A 5.1 BXA1_CLOBO
19 PsiBlast_PDB 27.3899% -65 - C1 -3C8B 5.4 BXA1_CLOBO
31 PsiBlast_CBE 27.2199% -68 - C1 -2IMA 4.3 BXA1_CLOBO
32 PsiBlast_CBE 27.0199% -68 - C1 -2ILP 4.8 BXA1_CLOBO
35 PsiBlast_CBE 26.8799% -67 - C1 -3QIZ 6.2 BXA1_CLOBH
34 PsiBlast_CBE 26.8799% -67 - C1 -3QJ0 6.0 BXA1_CLOBH
29 PsiBlast_CBE 26.4199% -71 - C1 -2IMB 3.1 BXA1_CLOBO
30 PsiBlast_CBE 26.3199% -68 - C1 -2IMA 4.8 BXA1_CLOBO