@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF09160_FIMH_ECOLI: (2014-10-16 )
MKRVITLFAVLLMGWSVNAWSFACKTANGTAIPIGGGSANVYVNLAPVVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTASFSPAQGVGVQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ZH1_A_5(3MCY)
?
[Raw transfer]



FVQ_B_5(4AVK)
FIMH_ECOLI
[Raw transfer]



ZH1_B_11(3MCY)
?
[Raw transfer]



ZH1_C_15(3MCY)
?
[Raw transfer]



J73_B_7(4AVJ)
FIMH_ECOLI
[Raw transfer]



HNW_B_8(4AUY)
FIMH_ECOLI
[Raw transfer]



DEG_A_4(1TR7)
FIMH_ECOLI
[Raw transfer]



FVQ_A_3(4AVK)
FIMH_ECOLI
[Raw transfer]



FYZ_C_10(4AV5)
FIMH_ECOLI
[Raw transfer]



HNV_B_6(4AV0)
FIMH_ECOLI
[Raw transfer]



DEG_B_5(1TR7)
FIMH_ECOLI
[Raw transfer]



HNV_A_2(4ATT)
FIMH_ECOLI
[Raw transfer]



XNS_B_6(4AVI)
FIMH_ECOLI
[Raw transfer]



DEG_A_2(1UWF)
FIMH_ECOLI
[Raw transfer]



FYZ_B_9(4AV5)
FIMH_ECOLI
[Raw transfer]



FK9_A_3(4AVH)
FIMH_ECOLI
[Raw transfer]



FYZ_D_11(4AV5)
FIMH_ECOLI
[Raw transfer]



HNW_A_2(4AUJ)
FIMH_ECOLI
[Raw transfer]



KGM_A_2(4LOV)
?
[Raw transfer]



KGM_A_3(4BUQ)
?
[Raw transfer]



BWG_A_3(3ZL1)
FIMH_ECOLI
[Raw transfer]



BWG_B_4(3ZL1)
FIMH_ECOLI
[Raw transfer]



SUGAR_B_7(2VCO)
FIMH_ECOLI
[Raw transfer]
-
KGM_B_4(4BUQ)
?
[Raw transfer]



FK9_B_6(4AVH)
FIMH_ECOLI
[Raw transfer]



SUGAR_A_5(2VCO)
FIMH_ECOLI
[Raw transfer]
-
EDO_B_7(4AUU)
FIMH_ECOLI
[Raw transfer]
41 PsiBlast_CBE 65.25100%-160 * C2 *4AVK 6.3 FIMH_ECOLI
47 PsiBlast_CBE 65.01100%-160 - C2 -4AV0 5.6 FIMH_ECOLI
42 PsiBlast_CBE 64.81100%-159 - C2 -4AVJ 5.3 FIMH_ECOLI
50 PsiBlast_CBE 64.66100%-159 - C2 -3ZL1 5.3 FIMH_ECOLI
45 PsiBlast_CBE 64.50100%-160 - C2 -4AV5 7.4 FIMH_ECOLI
48 PsiBlast_CBE 64.45100%-158 - C2 -4AUY 6.0 FIMH_ECOLI
13 PsiBlast_PDB 64.30100%-160 - C2 -4AVK 6.5 FIMH_ECOLI
51 PsiBlast_CBE 64.25100%-158 - C2 -2VCO 5.8 FIMH_ECOLI
46 PsiBlast_CBE 64.19100%-163 - C2 -4AV5 6.9 FIMH_ECOLI
17 PsiBlast_PDB 64.13100%-162 - C2 -4LOV 5.6 ?
9 PsiBlast_PDB 64.12100%-157 - C2 -1UWF 5.0 FIMH_ECOLI
16 PsiBlast_PDB 64.00100%-156 - C2 -3ZL1 5.2 FIMH_ECOLI
44 PsiBlast_CBE 63.83100%-156 - C2 -4AVH 5.6 FIMH_ECOLI
15 PsiBlast_PDB 63.71100%-156 - C2 -4AUJ 6.1 FIMH_ECOLI
10 PsiBlast_PDB 63.66100%-157 - C2 -2VCO 5.9 FIMH_ECOLI
49 PsiBlast_CBE 63.56100%-156 - C2 -4AUU 3.1 FIMH_ECOLI
12 PsiBlast_PDB 63.51100%-157 - C2 -4AVH 5.7 FIMH_ECOLI
18 PsiBlast_PDB 63.49100%-156 - C2 -4BUQ 5.3 ?
11 PsiBlast_PDB 63.46100%-158 - C2 -4AV5 7.5 FIMH_ECOLI
39 PsiBlast_CBE 63.44100%-155 - C2 -1TR7 5.1 FIMH_ECOLI
7 PsiBlast_PDB 63.43100%-155 - C2 -3MCY 6.8 ?
38 PsiBlast_CBE 63.32100%-153 - C2 -3MCY 7.5 ?
14 PsiBlast_PDB 63.32100%-151 - C2 -4ATT 6.1 FIMH_ECOLI
8 PsiBlast_PDB 63.32100%-154 - C2 -1TR7 5.4 FIMH_ECOLI
43 PsiBlast_CBE 63.31100%-153 - C2 -4AVI 5.4 FIMH_ECOLI
40 PsiBlast_CBE 62.95100%-152 - C2 -4BUQ 5.2 ?
37 PsiBlast_CBE 62.54100%-158 - C2 -3MCY 7.4 ?
36 PsiBlast_CBE 61.68100%-148 - C2 -3MCY - ?