@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF09281_DPO1_THEAQ: (2014-10-17 )
MRGMLPLFEPKGRVLLVDGHHLAYRTFHALKGLTTSRGEPVQAVYGFAKSLLKALKEDGDAVIVVFDAKAPSFRHEAYGGYKAGRAPTPEDFPRQLALIKELVDLLGLARLEVPGYEADDVLASLAKKAEKEGYEVRILTADKDLYQLLSDRIHVLHPEGYLITPAWLWEKYGLRPDQWADYRALTGDESDNLPGVKGIGEKTARKLLEEWGSLEALLKNLDRLKPAIREKILAHMDDLKLSWDLAKVRTDLPLEVDFAKRREPDRERLRAFLERLEFGSLLHEFGLLESPKALEEAPWPPPEGAFVGFVLSRKEPMWADLLALAAARGGRVHRAPEPYKALRDLKEARGLLAKDLSVLALREGLGLPPGDDPMLLAYLLDPSNTTPEGVARRYGGEWTEEAGERAALSERLFANLWGRLEGEERLLWLYREVERPLSAVLAHMEATGVRLDVAYLRALSLEVAEEIARLEAEVFRLAGHPFNLNSRDQLERVLFDELGLPAIGKTEKTGKRSTSAAVLEALREAHPIVEKILQYRELTKLKSTYIDPLPDLIHPRTGRLHTRFNQTATATGRLSSSDPNLQNIPVRTPLGQRIRRAFIAEEGWLLVALDYSQIELRVLAHLSGDENLIRVFQEGRDIHTETASWMFGVPREAVDPLMRRAAKTINFGVLYGMSAHRLSQELAIPYEEAQAFIERYFQSFPKVRAWIEKTLEEGRRRGYVETLFGRRRYVPDLEARVKSVREAAERMAFNMPVQGTAADLMKLAMVKLFPRLEEMGARMLLQVHDELVLEAPKERAEAVARLAKEVMEGVYPLAVPLEVEVGIGEDWLSAKE

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_5(3RR7)
DPO1_THEAQ
[Raw transfer]




DDS_A_7(3PO4)
DPO1_THEAQ
[Raw transfer]




DCT_A_4(4DLG)
DPO1_THEAQ
[Raw transfer]




0R6_A_4(4ELU)
DPO1_THEAQ
[Raw transfer]




0R7_A_5(4ELV)
DPO1_THEAQ
[Raw transfer]




DCT_A_6(3KTQ)
DPO1_THEAQ
[Raw transfer]




DCT_A_4(3PY8)
DPO1_THEAQ
[Raw transfer]




0L6_A_4(4DFM)
DPO1_THEAQ
[Raw transfer]




DDS_A_6(1QSY)
DPO1_THEAQ
[Raw transfer]




DDS_A_4(3LWM)
DPO1_THEAQ
[Raw transfer]




0R5_A_4(4ELT)
DPO1_THEAQ
[Raw transfer]




0L5_A_4(4DFK)
DPO1_THEAQ
[Raw transfer]




DG3_A_6(1QSS)
DPO1_THEAQ
[Raw transfer]




0KL_A_6(4DFJ)
DPO1_THEAQ
[Raw transfer]




DCP_A_4(3RTV)
DPO1_THEAQ
[Raw transfer]




0L7_A_11(4DFP)
DPO1_THEAQ
[Raw transfer]




TTP_A_6(1QTM)
DPO1_THEAQ
[Raw transfer]




DDS_A_7(3PO5)
DPO1_THEAQ
[Raw transfer]




HXZ_A_4(3M8R)
DPO1_THEAQ
[Raw transfer]




HXB_A_4(3M8S)
DPO1_THEAQ
[Raw transfer]




N5P_A_14(3T3F)
DPO1_THEAQ
[Raw transfer]




0L3_A_6(4DF4)
DPO1_THEAQ
[Raw transfer]




DDS_A_4(3LWL)
DPO1_THEAQ
[Raw transfer]




0L4_A_4(4DF8)
DPO1_THEAQ
[Raw transfer]




TTP_A_4(3RRH)
DPO1_THEAQ
[Raw transfer]




DG3_A_4(3RRG)
DPO1_THEAQ
[Raw transfer]




DG3_A_4(3RR8)
DPO1_THEAQ
[Raw transfer]




DCP_B_2(5KTQ)
DPO1_THEAQ
[Raw transfer]




GOL_A_7(3M8S)
DPO1_THEAQ
[Raw transfer]




DCT_A_4(4BWM)
DPO1_THEAQ
[Raw transfer]




GOL_A_6(3RRH)
DPO1_THEAQ
[Raw transfer]




GOL_A_6(4ELV)
DPO1_THEAQ
[Raw transfer]




FMT_A_11(4DF8)
DPO1_THEAQ
[Raw transfer]




GOL_A_10(4ELT)
DPO1_THEAQ
[Raw transfer]




FMT_A_10(4DFK)
DPO1_THEAQ
[Raw transfer]




FMT_A_10(4BWM)
DPO1_THEAQ
[Raw transfer]




GOL_A_5(3RR8)
DPO1_THEAQ
[Raw transfer]




GOL_A_8(3M8R)
DPO1_THEAQ
[Raw transfer]




DCT_A_5(2KTQ)
DPO1_THEAQ
[Raw transfer]




GOL_A_10(4DLG)
DPO1_THEAQ
[Raw transfer]




EDO_A_10(4DF8)
DPO1_THEAQ
[Raw transfer]




NACID_B_2(3LWL)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(3RRH)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(3RR7)
DPO1_THEAQ
[Raw transfer]

-

NACID_C_3(4DFJ)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(3PO4)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(4DFJ)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(4ELV)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(4ELU)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_1(1QSY)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(4ELT)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(3PO5)
DPO1_THEAQ
[Raw transfer]

-

CHAIN_B_2(4DLG)
DPO1_THEAQ
[Raw transfer]

-

NACID_C_3(3M8S)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(4DFM)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(3LWM)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_1(1QTM)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(3M8S)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_1(3KTQ)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(4DF8)
DPO1_THEAQ
[Raw transfer]

-

EDO_A_10(4DFJ)
DPO1_THEAQ
[Raw transfer]




NACID_B_2(3RTV)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_1(1QSS)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(4DFK)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_1(2KTQ)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(3M8R)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(3RRG)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(3T3F)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_1(4KTQ)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(3RR8)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(3PY8)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(4DFP)
DPO1_THEAQ
[Raw transfer]

-

NACID_B_2(4DF4)
DPO1_THEAQ
[Raw transfer]

-

PGE_A_5(3PO5)
DPO1_THEAQ
[Raw transfer]




PGE_A_7(3RRH)
DPO1_THEAQ
[Raw transfer]




CHAIN_C_3(4DLG)
DPO1_THEAQ
[Raw transfer]

-

15P_A_9(3M8S)
DPO1_THEAQ
[Raw transfer]




EDO_A_7(4DF4)
DPO1_THEAQ
[Raw transfer]




NACID_B_2(4BWM)
DPO1_THEAQ
[Raw transfer]

-

8 PsiBlast_PDB 77.84100%-106 - C1 -3M8S 19.0 DPO1_THEAQ
16 PsiBlast_PDB 76.42100%-104 - C1 -4DFJ 20.1 DPO1_THEAQ
15 PsiBlast_PDB 76.34100%-106 - C1 -4DF8 12.2 DPO1_THEAQ
19 PsiBlast_PDB 75.73100%-105 - C1 -4DFP 13.2 DPO1_THEAQ
23 PsiBlast_CBE 75.44100%-105 - C1 -4ELT 14.0 DPO1_THEAQ
21 PsiBlast_CBE 74.18100%-105 - C1 -4ELV 13.9 DPO1_THEAQ
26 PsiBlast_CBE 73.47100%-106 - C1 -1QTM 10.6 DPO1_THEAQ
20 PsiBlast_PDB 73.46100%-105 - C1 -3RTV 14.1 DPO1_THEAQ
17 PsiBlast_PDB 71.19100%-104 - C1 -4DFK 12.9 DPO1_THEAQ
18 PsiBlast_PDB 70.18100%-104 - C1 -4DFM 13.9 DPO1_THEAQ
22 PsiBlast_CBE 69.70100%-104 - C1 -4ELU 14.6 DPO1_THEAQ
14 PsiBlast_PDB 68.44100%-105 - C1 -4DF4 11.9 DPO1_THEAQ
7 PsiBlast_PDB 68.00100%-103 - C1 -3M8R 13.6 DPO1_THEAQ
6 PsiBlast_PDB 64.84100%-104 - C1 -3LWM 14.5 DPO1_THEAQ
24 PsiBlast_CBE 63.83100%-103 - C1 -4DLG 14.8 DPO1_THEAQ
12 PsiBlast_PDB 63.04100%-105 - C1 -3RRH 14.1 DPO1_THEAQ
29 PsiBlast_CBE 61.1999%-104 - C1 -1QSS 12.8 DPO1_THEAQ
28 PsiBlast_CBE 60.5199%-105 - C1 -1QSY 10.2 DPO1_THEAQ
3 PsiBlast_PDB 59.69100%-102 - C1 -3KTQ 12.3 DPO1_THEAQ
1 PsiBlast_PDB 58.61100%-106 - C1 -5KTQ 4.0 DPO1_THEAQ
11 PsiBlast_PDB 57.49100%-103 - C1 -3RRG 13.7 DPO1_THEAQ
25 PsiBlast_CBE 56.36100%-105 - C1 -4KTQ 9.3 DPO1_THEAQ
10 PsiBlast_PDB 55.70100%-101 - C1 -3RR8 13.8 DPO1_THEAQ
5 PsiBlast_PDB 53.73100%-103 - C1 -3LWL 14.5 DPO1_THEAQ
30 PsiBlast_CBE 53.5999%-104 - C1 -3PY8 13.8 DPO1_THEAQ
13 PsiBlast_PDB 51.14100%-103 - C1 -3T3F 13.6 DPO1_THEAQ
32 PsiBlast_CBE 42.6399%-101 - C1 -3PO4 14.8 DPO1_THEAQ
33 PsiBlast_CBE 42.4999%-101 - C1 -4BWM 6.7 DPO1_THEAQ
9 PsiBlast_PDB 39.12100%-102 - C1 -3RR7 13.1 DPO1_THEAQ
27 PsiBlast_CBE 38.88100%-102 - C1 -2KTQ 10.5 DPO1_THEAQ
31 PsiBlast_CBE 33.3499%-101 * C1 *3PO5 14.2 DPO1_THEAQ