@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF12549_TY3H_HUMAN: (2014-10-18 )
MPTPDATTPQAKGFRRAVSELDAKQAEAIMVRGQGAPGPSLTGSPWPGTAAPAASYTPTPRSPRFIGRRQSLIEDARKEREAAVAAAAAAVPSEPGDPLEAVAFEEKEGKAVLNLLFSPRATKPSALSRAVKVFETFEAKIHHLETRPAQRPRAGGPHLEYFVRLEVRRGDLAALLSGVRQVSEDVRSPAGPKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYRHGDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLEDVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAGLLSSYGELLHCLSEEPEIRAFDPEAAAVQPYQDQTYQSVYFVSESFSDAKDKLRSYASRIQRPFSVKFDPYTLAIDVLDSPQAVRRSLEGVQDELDTLAHALSAIG

Atome Classification :

(12 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

H4B_A_4(1MMK)
PH4H_HUMAN
[Raw transfer]




H4B_A_4(1MMT)
PH4H_HUMAN
[Raw transfer]




H4B_A_3(1KW0)
PH4H_HUMAN
[Raw transfer]




H2B_A_3(1TG2)
PH4H_HUMAN
[Raw transfer]




NLE_A_5(1MMT)
PH4H_HUMAN
[Raw transfer]




HBI_A_3(1LRM)
PH4H_HUMAN
[Raw transfer]




H4B_A_3(1J8U)
PH4H_HUMAN
[Raw transfer]




HBI_A_3(1DMW)
PH4H_HUMAN
[Raw transfer]




ALE_A_3(3PAH)
PH4H_HUMAN
[Raw transfer]




LNR_A_3(4PAH)
PH4H_HUMAN
[Raw transfer]




LDP_A_3(5PAH)
PH4H_HUMAN
[Raw transfer]




DAH_A_3(6PAH)
PH4H_HUMAN
[Raw transfer]




3QI_A_3(4ANP)
PH4H_HUMAN
[Raw transfer]




TIH_A_5(1MMK)
PH4H_HUMAN
[Raw transfer]




TIH_A_4(1KW0)
PH4H_HUMAN
[Raw transfer]




17 PsiBlast_PDB 27.6964% -95 - C1 -6PAH 3.8 PH4H_HUMAN
14 PsiBlast_PDB 27.5864% -96 - C1 -3PAH 3.7 PH4H_HUMAN
16 PsiBlast_PDB 25.9064% -95 - C1 -5PAH 3.8 PH4H_HUMAN
18 PsiBlast_PDB 25.6464% -95 - C1 -1DMW 4.2 PH4H_HUMAN
8 PsiBlast_PDB 24.0562% -95 - C1 -1LRM 4.3 PH4H_HUMAN
7 PsiBlast_PDB 23.1362% -94 - C1 -1J8U 4.5 PH4H_HUMAN
15 PsiBlast_PDB 21.4564% -92 - C1 -4PAH 3.7 PH4H_HUMAN
20 PsiBlast_PDB 17.8863% -93 - C1 -1TG2 4.8 PH4H_HUMAN
12 PsiBlast_PDB 17.3462% -91 * C1 *4ANP 5.9 PH4H_HUMAN
10 PsiBlast_PDB 11.6762% -93 - C1 -1MMK 5.0 PH4H_HUMAN
11 PsiBlast_PDB 6.6162% -92 - C1 -1MMT 4.8 PH4H_HUMAN
9 PsiBlast_PDB 4.0962% -91 - C1 -1KW0 4.8 PH4H_HUMAN