@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF13193_LUCI_PHOPY: (2014-10-19 )
MEDAKNIKKGPAPFYPLEDGTAGEQLHKAMKRYALVPGTIAFTDAHIEVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLIDKYDLSNLHEIASGGAPLSKEVGEAVAKRFHLPGIRQGYGLTETTSAILITPEGDDKPGAVGKVVPFFEAKVVDLDTGKTLGVNQRGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAELESILLQHPNIFDAGVAGLPDDDAGELPAAVVVLEHGKTMTEKEIVDYVASQVTTAKKLRGGVVFVDEVPKGLTGKLDARKIREILIKAKKGGKSKL

Atome Classification :

(15 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

M24_A_2(3IES)
LUCI_PHOPY
[Raw transfer]



SLU_A_3(4G37)
LUCI_PHOPY
[Raw transfer]



SLU_B_7(4G37)
LUCI_PHOPY
[Raw transfer]



SLU_B_4(4G36)
LUCI_PHOPY
[Raw transfer]



SLU_A_4(2D1T)
LUCI_LUCCR
[Raw transfer]



SLU_A_4(2D1S)
LUCI_LUCCR
[Raw transfer]



AYL_A_2(3NI2)
?
[Raw transfer]



923_A_2(3RIX)
LUCI_PHOPY
[Raw transfer]



AMP_A_2(2D1R)
LUCI_LUCCR
[Raw transfer]



AMP_B_2(2D1Q)
LUCI_LUCCR
[Raw transfer]



AMP_A_2(3A9V)
?
[Raw transfer]



0NJ_A_2(4E5D)
LUCI_PHOPY
[Raw transfer]



PG4_A_2(3IER)
LUCI_PHOPY
[Raw transfer]



OLU_A_3(2D1R)
LUCI_LUCCR
[Raw transfer]



EDO_A_7(3QYA)
?
[Raw transfer]



EDO_A_11(3QYA)
?
[Raw transfer]



EPE_A_3(3NI2)
?
[Raw transfer]



MBR_A_3(1BA3)
LUCI_PHOPY
[Raw transfer]



MBR_A_2(1BA3)
LUCI_PHOPY
[Raw transfer]
24 PsiBlast_CBE 97.42100%-119 - C1 -4G36 11.0 LUCI_PHOPY
25 PsiBlast_CBE 95.1998%-117 - C1 -4G37 10.3 LUCI_PHOPY
23 PsiBlast_CBE 95.15100%-122 - C1 -1BA3 3.8 LUCI_PHOPY
4 PsiBlast_PDB 94.1698%-118 - C1 -4G37 10.8 LUCI_PHOPY
7 PsiBlast_PDB 83.3068%-111 - C1 -2D1S 10.9 LUCI_LUCCR
9 PsiBlast_PDB 83.0568%-116 - C1 -2D1Q 6.6 LUCI_LUCCR
10 PsiBlast_PDB 82.6768%-111 - C1 -2D1R 7.2 LUCI_LUCCR
8 PsiBlast_PDB 82.5868%-113 - C1 -2D1T 10.8 LUCI_LUCCR
3 PsiBlast_PDB 73.04100%-128 - C1 -3IES 11.9 LUCI_PHOPY
22 PsiBlast_CBE 72.17100%-127 * C1 *3RIX 10.5 LUCI_PHOPY
2 PsiBlast_PDB 71.61100%-127 - C1 -3IER 2.3 LUCI_PHOPY
21 PsiBlast_CBE 71.03100%-128 - C1 -4E5D 6.2 LUCI_PHOPY
6 PsiBlast_PDB 68.0684%-123 - C1 -3QYA 2.3 ?
13 PsiBlast_PDB 53.0836%-107 - C1 -3NI2 9.2 ?
12 PsiBlast_PDB 52.0536%-105 - C1 -3A9V 6.4 ?