@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF13288_DXR_ECOLI: (2014-10-19 )
MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSLPQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKISVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDMRTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTALNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKEVMRLAS

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_B_8(2EGH)
DXR_ECOLI
[Raw transfer]




CBQ_A_6(1T1S)
DXR_ECOLI
[Raw transfer]




DXP_B_4(1Q0Q)
DXR_ECOLI
[Raw transfer]




DXP_A_3(1Q0Q)
DXR_ECOLI
[Raw transfer]




IMB_E_5(1T1R)
DXR_ECOLI
[Raw transfer]




CBQ_B_7(1T1S)
DXR_ECOLI
[Raw transfer]




C0K_A_4(3R0I)
DXR_ECOLI
[Raw transfer]




C0K_B_6(3R0I)
DXR_ECOLI
[Raw transfer]




FOM_A_2(1Q0H)
DXR_ECOLI
[Raw transfer]




FOM_B_6(2EGH)
DXR_ECOLI
[Raw transfer]




FOM_B_6(1ONP)
DXR_ECOLI
[Raw transfer]




IMB_F_6(1T1R)
DXR_ECOLI
[Raw transfer]




FOM_A_5(1ONP)
DXR_ECOLI
[Raw transfer]




FOM_A_5(2EGH)
DXR_ECOLI
[Raw transfer]




FOB_A_4(4GAE)
DXR_PLAFX
[Raw transfer]




SYD_A_3(3ANM)
DXR_ECOLI
[Raw transfer]




FOM_C_3(1Q0L)
DXR_ECOLI
[Raw transfer]




SYC_A_4(3ANL)
DXR_ECOLI
[Raw transfer]




SYE_A_4(3ANN)
DXR_ECOLI
[Raw transfer]




SYC_B_6(3ANL)
DXR_ECOLI
[Raw transfer]




SYD_B_5(3ANM)
DXR_ECOLI
[Raw transfer]




SYE_B_6(3ANN)
DXR_ECOLI
[Raw transfer]




NDP_A_5(1Q0Q)
DXR_ECOLI
[Raw transfer]




NDP_A_7(2EGH)
DXR_ECOLI
[Raw transfer]




NDP_B_6(1Q0Q)
DXR_ECOLI
[Raw transfer]




NDP_E_5(1Q0L)
DXR_ECOLI
[Raw transfer]




NDP_A_3(4GAE)
DXR_PLAFX
[Raw transfer]




NDP_A_5(1JVS)
DXR_ECOLI
[Raw transfer]




NDP_B_5(3ANL)
DXR_ECOLI
[Raw transfer]




NDP_A_3(3ANN)
DXR_ECOLI
[Raw transfer]




NDP_A_3(3ANL)
DXR_ECOLI
[Raw transfer]




NDP_B_5(3ANN)
DXR_ECOLI
[Raw transfer]




NDP_A_4(3ANM)
DXR_ECOLI
[Raw transfer]




NDP_B_6(3ANM)
DXR_ECOLI
[Raw transfer]




NDP_A_3(1Q0H)
DXR_ECOLI
[Raw transfer]




5 PsiBlast_PDB 93.73100%-116 - C1 -3R0I 3.7 DXR_ECOLI
20 PsiBlast_CBE 92.32100%-116 - C1 -3R0I 3.8 DXR_ECOLI
23 PsiBlast_CBE 92.01100%-112 * C1 *1T1R 4.1 DXR_ECOLI
22 PsiBlast_CBE 91.22100%-109 - C1 -1T1S 3.2 DXR_ECOLI
24 PsiBlast_CBE 90.72100%-111 - C1 -2EGH 6.9 DXR_ECOLI
9 PsiBlast_PDB 90.43100%-112 - C1 -1T1S 3.0 DXR_ECOLI
26 PsiBlast_CBE 89.88100%-111 - C1 -3ANM 9.8 DXR_ECOLI
25 PsiBlast_CBE 89.48100%-111 - C1 -3ANN 9.8 DXR_ECOLI
8 PsiBlast_PDB 88.72100%-112 - C1 -1T1R 3.5 DXR_ECOLI
27 PsiBlast_CBE 87.69100%-109 - C1 -3ANL 10.1 DXR_ECOLI
13 PsiBlast_PDB 86.90100%-112 - C1 -3ANN 11.2 DXR_ECOLI
11 PsiBlast_PDB 86.24100%-112 - C1 -3ANL 10.9 DXR_ECOLI
10 PsiBlast_PDB 85.89100%-108 - C1 -2EGH 7.9 DXR_ECOLI
12 PsiBlast_PDB 85.75100%-110 - C1 -3ANM 11.1 DXR_ECOLI
15 PsiBlast_PDB 85.7395%-109 - C1 -1JVS 9.1 DXR_ECOLI
4 PsiBlast_PDB 85.51100%-109 - C1 -1ONP 3.0 DXR_ECOLI
21 PsiBlast_CBE 82.49100%-108 - C1 -1Q0Q 11.8 DXR_ECOLI
7 PsiBlast_PDB 82.04100%-108 - C1 -1Q0Q 11.9 DXR_ECOLI
18 PsiBlast_CBE 82.01100%-109 - C1 -1ONP 3.0 DXR_ECOLI
6 PsiBlast_PDB 75.99100%-106 - C1 -1Q0L 11.6 DXR_ECOLI
14 PsiBlast_PDB 75.8095%-108 - C1 -1Q0H 6.9 DXR_ECOLI
17 PsiBlast_PDB 2.0535% -98 - C1 -4GAE 11.8 DXR_PLAFX