@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF13419_HYES_RAT: (2014-10-19 )
MALRVAAFDLDGVLALPSIAGVLRHTEEALALPRDFLLGAFQMKFPEGPTEQLMKGKITFSQWVPLMDESCRKSSKACGASLPENFSISEIFSQAMAARSINRPMLQAAAALKKKGFTTCIVTNNWLDDSDKRDILAQMMCELSQHFDFLIESCQVGMIKPEPQIYKFVLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVRDTASALRELEKVTGTQFPEAPLPVPCSPNDVSHGYVTVKPGIRLHFVEMGSGPAICLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCEEMVTFLNKLGIPQAVFIGHDWAGVLVWNMALFHPERVRAVASLNTPLMPPNPEVSPMEVIRSIPVFNYQLYFQEPGVAEAELEKNMSRTFKSFFRTSDDMGLLTVNKATEMGGILVGTPEDPKVSKITTEEEIEYYIQQFKKSGFRGPLNWYRNTERNWKWSCKALGRKILVPALMVTAEKDIVLRPEMSKNMENWIPFLKRGHIEDCGHWTQIEKPAEVNQILIKWLKTEIQNPSVTSKI

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIU_D_4(1EK1)
HYES_MOUSE
[Raw transfer]




33N_A_2(3I1Y)
HYES_HUMAN
[Raw transfer]




CDU_D_4(1EK2)
HYES_MOUSE
[Raw transfer]




S38_A_3(3ANS)
HYES_HUMAN
[Raw transfer]




MZL_A_2(3OTQ)
HYES_HUMAN
[Raw transfer]




S38_B_4(3ANS)
HYES_HUMAN
[Raw transfer]




34N_A_2(3I28)
HYES_HUMAN
[Raw transfer]




CIU_A_5(1VJ5)
HYES_HUMAN
[Raw transfer]




NC6_A_4(1ZD4)
HYES_HUMAN
[Raw transfer]




I23_A_4(4HAI)
HYES_HUMAN
[Raw transfer]




NC7_A_4(1ZD5)
HYES_HUMAN
[Raw transfer]




S82_B_4(3ANT)
HYES_HUMAN
[Raw transfer]




ZYI_A_3(3PDC)
HYES_HUMAN
[Raw transfer]




NC4_A_5(1ZD3)
HYES_HUMAN
[Raw transfer]




S82_A_3(3ANT)
HYES_HUMAN
[Raw transfer]




ZYI_B_4(3PDC)
HYES_HUMAN
[Raw transfer]




24D_A_2(3KOO)
HYES_HUMAN
[Raw transfer]




FVS_A_4(4J03)
HYES_HUMAN
[Raw transfer]




NC3_P_4(1ZD2)
HYES_HUMAN
[Raw transfer]




1LF_A_2(4JNC)
HYES_HUMAN
[Raw transfer]




CPU_D_4(1CR6)
HYES_MOUSE
[Raw transfer]




24 PsiBlast_CBE 93.2472%-116 * C1 *1ZD3 4.3 HYES_HUMAN
21 PsiBlast_CBE 93.0572%-116 - C1 -3I1Y 7.1 HYES_HUMAN
20 PsiBlast_CBE 93.0172%-116 - C1 -3I28 7.7 HYES_HUMAN
26 PsiBlast_CBE 91.4072%-114 - C1 -1VJ5 4.6 HYES_HUMAN
13 PsiBlast_CBE 90.9191%-113 - C1 -1EK2 5.9 HYES_MOUSE
15 PsiBlast_CBE 90.3391%-110 - C1 -1CR6 6.0 HYES_MOUSE
16 PsiBlast_CBE 89.5372%-114 - C1 -4J03 8.4 HYES_HUMAN
17 PsiBlast_CBE 89.3572%-114 - C1 -4HAI 6.8 HYES_HUMAN
22 PsiBlast_CBE 89.3072%-112 - C1 -1ZD5 5.1 HYES_HUMAN
23 PsiBlast_CBE 88.8872%-113 - C1 -1ZD4 4.7 HYES_HUMAN
25 PsiBlast_CBE 88.7972%-112 - C1 -1ZD2 3.9 HYES_HUMAN
18 PsiBlast_CBE 88.7872%-112 - C1 -3OTQ 8.5 HYES_HUMAN
19 PsiBlast_CBE 88.3772%-114 - C1 -3KOO 6.9 HYES_HUMAN
14 PsiBlast_CBE 87.0091%-110 - C1 -1EK1 6.5 HYES_MOUSE
3 PsiBlast_PDB 42.5575%-109 - C1 -3PDC 4.9 HYES_HUMAN
30 PsiBlast_CBE 42.0875%-109 - C1 -3PDC 5.4 HYES_HUMAN
1 PsiBlast_PDB 39.8774%-108 - C1 -3ANS 6.4 HYES_HUMAN
2 PsiBlast_PDB 38.9374%-107 - C1 -3ANT 7.6 HYES_HUMAN
29 PsiBlast_CBE 38.6674%-105 - C1 -3ANS 6.3 HYES_HUMAN
4 PsiBlast_PDB 38.2175%-105 - C1 -4JNC 8.0 HYES_HUMAN
28 PsiBlast_CBE 38.1674%-105 - C1 -3ANT 7.5 HYES_HUMAN