@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : 5HT1D_HUMAN: (2016-01-08 )
MSPLNQSAEGLPQEASNRSLNATETSEAWDPRTLQALKISLAVVLSVITLATVLSNAFVLTTILLTRKLHTPANYLIGSLATTDLLVSILVMPISIAYTITHTWNFGQILCDIWLSSDITCCTASILHLCVIALDRYWAITDALEYSKRRTAGHAATMIAIVWAISICISIPPLFWRQAKAQEEMSDCLVNTSQISYTIYSTCGAFYIPSVLLIILYGRIYRAARNRILNPPSLYGKRFTTAHLITGSAGSSLCSLNSSLHEGHSHSAGSPLFFNHVKIKLADSALERKRISAARERKATKILGIILGAFIICWLPFFVVSLVLPICRDSCWIHPALFDFFTWLGYLNSLINPIIYTVFNEEFRQAFQKIVPFRKAS

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

D10_C_21(2VT4)
ADRB1_MELGA
[Raw transfer]




2CV_B_9(2YCW)
ADRB1_MELGA
[Raw transfer]




D10_C_21(2VT4)
ADRB1_MELGA
[Raw transfer]




SOG_B_5(2YCX)
ADRB1_MELGA
[Raw transfer]




SOG_B_13(2VT4)
ADRB1_MELGA
[Raw transfer]




SOG_A_5(2YCY)
ADRB1_MELGA
[Raw transfer]




2CV_B_17(4AMJ)
ADRB1_MELGA
[Raw transfer]




1 PsiBlast_PDB 89.4955%-145 - C4 -4IAR - C562_ECOLX -
8 PsiBlast_PDB 74.5433%-152 - C4 -2Y00 - ADRB1_MELGA -
69 HHSearch 74.4733%-127 - C4 -3PBL - DRD3_HUMAN (first) -
27 PsiBlast_CBE 74.3334%-150 - C4 -2VT4 - ADRB1_MELGA -
2 PsiBlast_PDB 74.2834%-151 - C4 -3SN6 - -
63 HHSearch 74.2428%-128 - C4 -3UON - ACM2_HUMAN (first) -
15 PsiBlast_PDB 74.1433%-148 - C4 -3ZPR - ADRB1_MELGA -
11 PsiBlast_PDB 74.0133%-153 - C4 -2Y03 - ADRB1_MELGA -
10 PsiBlast_PDB 73.9133%-154 - C4 -2Y02 - ADRB1_MELGA -
14 PsiBlast_PDB 73.8433%-148 - C4 -3ZPQ - ADRB1_MELGA -
9 PsiBlast_PDB 73.5833%-153 - C4 -2Y01 - ADRB1_MELGA -
7 PsiBlast_PDB 73.4534%-141 - C4 -2YCY - ADRB1_MELGA -
13 PsiBlast_PDB 73.4133%-149 - C4 -4AMJ - ADRB1_MELGA -
12 PsiBlast_PDB 73.1233%-153 - C4 -2Y04 - ADRB1_MELGA -
34 PsiBlast_CBE 72.9433%-145 - C4 -2Y02 - ADRB1_MELGA -
16 PsiBlast_PDB 72.9133%-142 - C4 -4BVN - ADRB1_MELGA -
31 PsiBlast_CBE 72.7333%-143 - C4 -3ZPQ - ADRB1_MELGA -
22 PsiBlast_CBE 72.6834%-139 - C4 -2YCY 3.2 ADRB1_MELGA
64 HHSearch 72.5432%-121 - C4 -2RH1 - ADRB2_HUMAN (first) -
33 PsiBlast_CBE 72.4833%-146 - C4 -2Y03 - ADRB1_MELGA -
3 PsiBlast_PDB 72.3034%-151 - C4 -2VT4 2.5 ADRB1_MELGA
24 PsiBlast_CBE 72.1934%-142 - C4 -2YCW 3.3 ADRB1_MELGA
28 PsiBlast_CBE 72.1433%-144 - C4 -4AMJ 3.9 ADRB1_MELGA
25 PsiBlast_CBE 71.4434%-151 - C4 -2VT4 2.6 ADRB1_MELGA
23 PsiBlast_CBE 71.0234%-141 - C4 -2YCX 2.3 ADRB1_MELGA
26 PsiBlast_CBE 70.6434%-152 - C4 -2VT4 3.0 ADRB1_MELGA