@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : 5HT2A_HUMAN: (2016-01-08 )
MDILCEENTSLSSTTNSLMQLNDDTRLYSNDFNSGEANTSDAFNWTVDSENRTNLSCEGCLSPSCLSLLHLQEKNWSALLTAVVIILTIAGNILVIMAVSLEKKLQNATNYFLMSLAIADMLLGFLVMPVSMLTILYGYRWPLPSKLCAVWIYLDVLFSTASIMHLCAISLDRYVAIQNPIHHSRFNSRTKAFLKIIAVWTISVGISMPIPVFGLQDDSKVFKEGSCLLADDNFVLIGSFVSFFIPLTIMVITYFLTIKSLQKEATLCVSDLGTRAKLASFSFLPQSSLSSEKLFQRSIHREPGSYTGRRTMQSISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKESCNEDVIGALLNVFVWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQYKENKKPLQLILVNTIPALAYKSSQLQMGQKKNSKQDAKTTDNDCSMVALGKQHSEEASKDNSDGVNEKVSCV

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

D10_A_10(2VT4)
ADRB1_MELGA
[Raw transfer]




Y01_B_9(2Y03)
ADRB1_MELGA
[Raw transfer]




2CV_B_9(2YCW)
ADRB1_MELGA
[Raw transfer]




2CV_B_9(2YCW)
ADRB1_MELGA
[Raw transfer]




SOG_B_5(2YCX)
ADRB1_MELGA
[Raw transfer]




D10_C_21(2VT4)
ADRB1_MELGA
[Raw transfer]




SOG_B_7(2YCY)
ADRB1_MELGA
[Raw transfer]




D10_C_21(2VT4)
ADRB1_MELGA
[Raw transfer]




SOG_B_5(2YCX)
ADRB1_MELGA
[Raw transfer]




D10_A_10(2VT4)
ADRB1_MELGA
[Raw transfer]




2CV_B_5(4AMI)
ADRB1_MELGA
[Raw transfer]




SOG_B_7(2YCY)
ADRB1_MELGA
[Raw transfer]




2CV_B_18(2Y00)
ADRB1_MELGA
[Raw transfer]




2CV_B_17(2Y01)
ADRB1_MELGA
[Raw transfer]




2CV_B_17(4AMJ)
ADRB1_MELGA
[Raw transfer]




76 HHSearch 92.5731%-144 - C6 -3PBL - DRD3_HUMAN (first) -
70 HHSearch 89.6228%-134 - C6 -2RH1 - ADRB2_HUMAN (first) -
69 HHSearch 86.4924%-137 - C6 -3UON - ACM2_HUMAN (first) -
6 PsiBlast_PDB 84.2633%-155 - C6 -2Y03 - ADRB1_MELGA -
72 HHSearch 84.1426%-136 - C6 -3RZE - ENLYS_BPT4 (first) -
33 PsiBlast_CBE 84.0832%-151 - C6 -2YCW 2.6 ADRB1_MELGA
25 PsiBlast_CBE 83.9233%-151 - C6 -2Y04 - ADRB1_MELGA -
10 PsiBlast_PDB 83.7233%-154 - C6 -3ZPR - ADRB1_MELGA -
5 PsiBlast_PDB 83.4533%-155 - C6 -2Y02 - ADRB1_MELGA -
26 PsiBlast_CBE 83.2333%-146 - C6 -2Y03 5.6 ADRB1_MELGA
8 PsiBlast_PDB 83.2233%-150 - C6 -4AMJ - ADRB1_MELGA -
29 PsiBlast_CBE 82.9833%-148 - C6 -2Y00 2.9 ADRB1_MELGA
3 PsiBlast_PDB 82.9733%-154 - C6 -2Y00 - ADRB1_MELGA -
9 PsiBlast_PDB 82.9533%-152 - C6 -3ZPQ - ADRB1_MELGA -
23 PsiBlast_CBE 82.9333%-150 - C6 -3ZPR - ADRB1_MELGA -
24 PsiBlast_CBE 82.8733%-147 - C6 -3ZPQ - ADRB1_MELGA -
7 PsiBlast_PDB 82.7033%-155 - C6 -2Y04 - ADRB1_MELGA -
4 PsiBlast_PDB 82.5833%-155 - C6 -2Y01 - ADRB1_MELGA -
21 PsiBlast_CBE 82.5033%-147 - C6 -4AMJ 4.2 ADRB1_MELGA
28 PsiBlast_CBE 82.4033%-150 - C6 -2Y01 2.8 ADRB1_MELGA
15 PsiBlast_PDB 82.1832%-151 - C6 -2YCY 2.6 ADRB1_MELGA
31 PsiBlast_CBE 82.0632%-150 - C6 -2YCY 2.4 ADRB1_MELGA
22 PsiBlast_CBE 81.9233%-153 - C6 -4AMI 2.5 ADRB1_MELGA
32 PsiBlast_CBE 81.5432%-150 - C6 -2YCX 2.7 ADRB1_MELGA
13 PsiBlast_PDB 81.3832%-149 - C6 -2YCX 2.4 ADRB1_MELGA
12 PsiBlast_PDB 81.1532%-149 - C6 -2YCW 3.1 ADRB1_MELGA
34 PsiBlast_CBE 79.9632%-158 - C6 -2VT4 3.1 ADRB1_MELGA
36 PsiBlast_CBE 79.6932%-158 - C6 -2VT4 3.1 ADRB1_MELGA
11 PsiBlast_PDB 79.6932%-157 - C6 -2VT4 2.3 ADRB1_MELGA
35 PsiBlast_CBE 78.4532%-161 - C6 -2VT4 3.1 ADRB1_MELGA