@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : 5HT4R_HUMAN: (2016-01-08 )
MDKLDANVSSEEGFGSVEKVVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKRKFNQNSNSTYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHSTHRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWLGYINSGLNPFLYAFLNKSFRRAFLIILCCDDERYRRPSILGQTVPCSTTTINGSTHVLRDAVECGGQWESQCHPPATSPLVAAQPSDT

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SOG_B_8(2YCY)
ADRB1_MELGA
[Raw transfer]




2CV_B_18(4AMJ)
ADRB1_MELGA
[Raw transfer]




D10_A_10(2VT4)
ADRB1_MELGA
[Raw transfer]




STE_A_8(3VG9)
?
[Raw transfer]




OLC_A_11(4BVN)
ADRB1_MELGA
[Raw transfer]




CLR_A_14(2RH1)
ADRB2_HUMAN
[Raw transfer]




CLR_A_14(2RH1)
ADRB2_HUMAN
[Raw transfer]




85 HHSearch 95.7537%-145 - C4 -2RH1 3.4 ADRB2_HUMAN (first)
75 Fugue 95.6037%-153 - C4 -2RH1 3.4 ADRB2_HUMAN (first)
90 HHSearch 92.6937%-154 - C4 -3PBL - DRD3_HUMAN (first) -
84 HHSearch 91.9330%-148 - C4 -3UON - ACM2_HUMAN (first) -
88 HHSearch 90.5232%-149 - C4 -3EML - ENLYS_BPT4 -
86 HHSearch 90.2833%-158 - C4 -3RZE - ENLYS_BPT4 (first) -
23 PsiBlast_CBE 88.2940%-154 - C4 -3ZPR - ADRB1_MELGA -
4 PsiBlast_PDB 88.2140%-163 - C4 -2Y03 - ADRB1_MELGA -
7 PsiBlast_PDB 88.2040%-159 - C4 -3ZPQ - ADRB1_MELGA -
1 PsiBlast_PDB 88.1440%-159 - C4 -2Y00 - ADRB1_MELGA -
11 PsiBlast_PDB 87.9840%-149 - C4 -2YCW - ADRB1_MELGA -
36 PsiBlast_CBE 87.8740%-162 - C4 -2VT4 - ADRB1_MELGA -
21 PsiBlast_CBE 87.7940%-153 - C4 -4AMJ 2.8 ADRB1_MELGA
33 PsiBlast_CBE 87.7740%-152 - C4 -2YCW - ADRB1_MELGA -
8 PsiBlast_PDB 87.7440%-161 - C4 -3ZPR - ADRB1_MELGA -
26 PsiBlast_CBE 87.7040%-153 - C4 -2Y03 - ADRB1_MELGA -
24 PsiBlast_CBE 87.7040%-153 - C4 -3ZPQ - ADRB1_MELGA -
28 PsiBlast_CBE 87.5740%-155 - C4 -2Y01 - ADRB1_MELGA -
2 PsiBlast_PDB 87.5340%-161 - C4 -2Y01 - ADRB1_MELGA -
13 PsiBlast_PDB 87.4140%-156 - C4 -2YCZ - ADRB1_MELGA -
9 PsiBlast_PDB 87.2839%-148 - C4 -4BVN 2.7 ADRB1_MELGA
14 PsiBlast_PDB 86.9640%-152 - C4 -2YCY Error ADRB1_MELGA
10 PsiBlast_PDB 86.9140%-161 - C4 -2VT4 3.0 ADRB1_MELGA
54 PsiBlast_CBE 83.7332%-164 - C4 -3VG9 3.6 ?