@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : ACM1_HUMAN: (2016-01-08 )
MNTSAPPAVSPNITVLAPGKGPWQVAFIGITTGLLSLATVTGNLLVLISFKVNTELKTVNNYFLLSLACADLIIGTFSMNLYTTYLLMGHWALGTLACDLWLALDYVASNASVMNLLLISFDRYFSVTRPLSYRAKRTPRRAALMIGLAWLVSFVLWAPAILFWQYLVGERTVLAGQCYIQFLSQPIITFGTAMAAFYLPVTVMCTLYWRIYRETENRARELAALQGSETPGKGGGSSSSSERSQPGAEGSPETPPGRCCRCCRAPRLLQAYSWKEEEEEDEGSMESLTSSEGEEPGSEVVIKMPMVDPEAQAPTKQPPRSSPNTVKRPTKKGRDRAGKGQKPRGKEQLAKRKTFSLVKEKKAARTLSAILLAFILTWTPYNIMVLVSTFCKDCVPETLWELGYWLCYVNSTINPMCYALCNKAFRDTFRLLLLCRWDKRRWRKIPKRPGSVHRTPSRQC

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3C0_B_7(4U16)
?
[Raw transfer]




3C0_A_4(4U16)
?
[Raw transfer]




QNB_A_2(3UON)
ACM2_HUMAN
[Raw transfer]




0HK_A_2(4U14)
ENLYS_BPT4
[Raw transfer]




0HK_B_9(4U15)
?
[Raw transfer]




0HK_A_3(4U15)
ACM3_RAT
[Raw transfer]




5EH_A_2(3RZE)
ENLYS_BPT4
[Raw transfer]




2 PsiBlast_PDB 93.7652% -85 - C3 -4U14 7.0 ENLYS_BPT4
21 PsiBlast_CBE 93.1051% -86 - C3 -4DAJ - ACM3_RAT (first) -
23 PsiBlast_CBE 92.4351% -87 - C3 -4DAJ - ACM3_RAT (first) -
1 PsiBlast_PDB 91.9351% -84 - C3 -4DAJ - ACM3_RAT (first) -
22 PsiBlast_CBE 91.6551% -86 - C3 -4DAJ - ACM3_RAT (first) -
5 PsiBlast_PDB 91.6245% -80 - C3 -3UON 8.7 ACM2_HUMAN (first)
3 PsiBlast_PDB 88.8653% -93 - C3 -4U15 7.2 ACM3_RAT
24 PsiBlast_CBE 88.3653% -96 - C3 -4U16 6.5 ?
25 PsiBlast_CBE 87.2853% -95 - C3 -4U15 7.5 ?
4 PsiBlast_PDB 85.4753% -95 - C3 -4U16 6.5 ?
9 PsiBlast_PDB 83.3725% -69 - C3 -3NY8 - ENLYS_BPT4 -
8 PsiBlast_PDB 83.3425% -71 - C3 -3D4S - ENLYS_BPT4 -
13 PsiBlast_PDB 83.0825% -70 - C3 -2RH1 - ADRB2_HUMAN (first) -
10 PsiBlast_PDB 82.9825% -73 - C3 -3NY9 - ADRB2_HUMAN (first) -
14 PsiBlast_PDB 81.3625% -67 - C3 -3PDS - ADRB2_HUMAN (first) -
11 PsiBlast_PDB 80.9625% -73 - C3 -3NYA - ADRB2_HUMAN (first) -
12 PsiBlast_PDB 80.8925%-142 - C3 -3P0G - ENLYS_BPT4 -
15 PsiBlast_PDB 79.9127% -79 - C3 -3PBL - DRD3_HUMAN (first) -
6 PsiBlast_PDB 79.7329% -76 - C3 -3RZE 6.8 ENLYS_BPT4 (first)
48 Fugue 73.8423% -67 - C3 -2RH1 - ADRB2_HUMAN (first) -