@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : CASR_HUMAN: (2016-01-09 )
MAFYSCCWVLLALTWHTSAYGPDQRAQKKGDIILGGLFPIHFGVAAKDQDLKSRPESVECIRYNFRGFRWLQAMIFAIEEINSSPALLPNLTLGYRIFDTCNTVSKALEATLSFVAQNKIDSLNLDEFCNCSEHIPSTIAVVGATGSGVSTAVANLLGLFYIPQVSYASSSRLLSNKNQFKSFLRTIPNDEHQATAMADIIEYFRWNWVGTIAADDDYGRPGIEKFREEAEERDICIDFSELISQYSDEEEIQHVVEVIQNSTAKVIVVFSSGPDLEPLIKEIVRRNITGKIWLASEAWASSSLIAMPQYFHVVGGTIGFALKAGQIPGFREFLKKVHPRKSVHNGFAKEFWEETFNCHLQEGAKGPLPVDTFLRGHEESGDRFSNSSTAFRPLCTGDENISSVETPYIDYTHLRISYNVYLAVYSIAHALQDIYTCLPGRGLFTNGSCADIKKVEAWQVLKHLRHLNFTNNMGEQVTFDECGDLVGNYSIINWHLSPEDGSIVFKEVGYYNVYAKKGERLFINEEKILWSGFSREVPFSNCSRDCLAGTRKGIIEGEPTCCFECVECPDGEYSDETDASACNKCPDDFWSNENHTSCIAKEIEFLSWTEPFGIALTLFAVLGIFLTAFVLGVFIKFRNTPIVKATNRELSYLLLFSLLCCFSSSLFFIGEPQDWTCRLRQPAFGISFVLCISCILVKTNRVLLVFEAKIPTSFHRKWWGLNLQFLLVFLCTFMQIVICVIWLYTAPPSSYRNQELEDEIIFITCHEGSLMALGFLIGYTCLLAAICFFFAFKSRKLPENFNEAKFITFSMLIFFIVWISFIPAYASTYGKFVSAVEVIAILAASFGLLACIFFNKIYIILFKPSRNTIEEVRCSTAAHAFKVAARATLRRSNVSRKRSSSLGGSTGSTPSSSISSKSNSEDPFPQPERQKQQQPLALTQQEQQQQPLTLPQQQRSQQQPRCKQKVIFGSGTVTFSLSFDEPQKNAMAHRNSTHQNSLEAQKSSDTLTRHQPLLPLQCGETDLDLTVQETGLQGPVGGDQRPEVEDPEELSPALVVSSSQSFVISGGGSTVTENVVNS

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2CG_F_6(2E4V)
GRM3_RAT
[Raw transfer]




2CG_E_5(2E4V)
GRM3_RAT
[Raw transfer]




52A_D_4(2E4Y)
GRM3_RAT
[Raw transfer]




52A_E_5(2E4Y)
GRM3_RAT
[Raw transfer]




GLU_F_6(2E4U)
GRM3_RAT
[Raw transfer]




C5B_E_5(2E4X)
GRM3_RAT
[Raw transfer]




C5A_E_5(2E4W)
GRM3_RAT
[Raw transfer]




C5B_F_6(2E4X)
GRM3_RAT
[Raw transfer]




C5A_F_6(2E4W)
GRM3_RAT
[Raw transfer]




GLU_E_5(2E4U)
GRM3_RAT
[Raw transfer]




52Q_A_4(5CNJ)
?
[Raw transfer]




GGL_A_3(5CNI)
?
[Raw transfer]




GLU_E_5(2E4U)
GRM3_RAT
[Raw transfer]




40H_A_3(4XAS)
GRM2_HUMAN
[Raw transfer]




GLU_E_5(2E4U)
GRM3_RAT
[Raw transfer]




52Q_A_2(5CNM)
?
[Raw transfer]




MES_C_3(2E4Z)
GRM7_RAT
[Raw transfer]




57 Fugue 93.6135% -89 - C2 -2E4U 3.0 GRM3_RAT
35 HHSearch 90.4333% -89 - C2 -2E4U 3.0 GRM3_RAT
3 PsiBlast_PDB 89.9232% -90 - C2 -2E4W 3.6 GRM3_RAT
5 PsiBlast_PDB 89.8232% -88 - C2 -2E4Y 3.0 GRM3_RAT
2 PsiBlast_PDB 89.7832% -87 - C2 -2E4V 2.7 GRM3_RAT
25 PsiBlast_CBE 89.2132% -88 - C2 -2E4U 3.1 GRM3_RAT
24 PsiBlast_CBE 89.1032% -86 - C2 -2E4V 2.8 GRM3_RAT
1 PsiBlast_PDB 88.9432% -90 - C2 -2E4U 4.2 GRM3_RAT
23 PsiBlast_CBE 88.9132% -89 - C2 -2E4W 3.8 GRM3_RAT
22 PsiBlast_CBE 88.7632% -88 - C2 -2E4X 3.7 GRM3_RAT
4 PsiBlast_PDB 88.4332% -86 - C2 -2E4X 3.5 GRM3_RAT
36 HHSearch 85.6435% -92 * C2 *3SM9 - GRM3_HUMAN -
11 PsiBlast_PDB 85.5230% -99 - C2 -5CNJ 4.7 ?
10 PsiBlast_PDB 85.2333% -92 - C2 -3SM9 - GRM3_HUMAN -
21 PsiBlast_CBE 84.4132% -87 - C2 -2E4Y 3.2 GRM3_RAT
27 PsiBlast_CBE 83.6833% -87 - C2 -5CNK - ? -
8 PsiBlast_PDB 83.3333% -83 - C2 -5CNK - ? -
26 PsiBlast_CBE 83.3033% -85 - C2 -5CNK - ? -
7 PsiBlast_PDB 83.1333% -85 - C2 -4XAR - GRM3_HUMAN -
58 Fugue 82.9429% -81 - C2 -1EWK - GRM1_RAT -
9 PsiBlast_PDB 82.9233% -94 - C2 -5CNM 3.2 ?
13 PsiBlast_PDB 82.8830% -94 - C2 -5CNI 2.9 ?
12 PsiBlast_PDB 82.8230% -96 - C2 -4XAS 4.3 GRM2_HUMAN
6 PsiBlast_PDB 81.5031% -97 - C2 -2E4Z 2.2 GRM7_RAT