@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : CRFR1_HUMAN: (2016-01-09 )
MGGHPQLRLVKALLLLGLNPVSASLQDQHCESLSLASNISGLQCNASVDLIGTCWPRSPAGQLVVRPCPAFFYGVRYNTTNNGYRECLANGSWAARVNYSECQEILNEEKKSKVHYHVAVIINYLGHCISLVALLVAFVLFLRLRPGCTHWGDQADGALEVGAPWSGAPFQVRRSIRCLRNIIHWNLISAFILRNATWFVVQLTMSPEVHQSNVGWCRLVTAAYNYFHVTNFFWMFGEGCYLHTAIVLTYSTDRLRKWMFICIGWGVPFPIIVAWAIGKLYYDNEKCWFGKRPGVYTDYIYQGPMILVLLINFIFLFNIVRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDEVSRVVFIYFNSFLESFQGFFVSVFYCFLNSEVRSAIRKRWHRWQDKHSIRARVARAMSIPTSPTRVSFHSIKQSTAV

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CHAIN_B_2(3EHT)
MALE_ECOLI
[Raw transfer]
-
CHAIN_E_5(3N96)
CRFR2_HUMAN
[Raw transfer]
-
CHAIN_C_3(3N93)

[Raw transfer]
-
CHAIN_F_6(3N96)

[Raw transfer]
-
CHAIN_F_6(3N95)

[Raw transfer]
-
CHAIN_G_7(3N96)
CRFR2_HUMAN
[Raw transfer]
-
CHAIN_H_8(3N96)
CRFR2_HUMAN
[Raw transfer]
-
CHAIN_E_5(3N95)
CRFR2_HUMAN
[Raw transfer]
-
CHAIN_B_2(2JND)
CRFR2_MOUSE
[Raw transfer]
-
53 Fugue 76.8942% -97 - C2 -4K5Y - CRFR1_HUMAN (first) -
21 PsiBlast_CBE 70.3195%-134 - C2 -4K5Y - CRFR1_HUMAN -
2 PsiBlast_PDB 58.22100% -40 - C4 -3EHS - MALE_ECOLI -
5 PsiBlast_PDB 56.6533%-137 - C2 -4L6R - GLR_HUMAN -
58 Fugue 55.0421%-115 * C3 *4U6D - ? -
62 Fugue 52.7215% -90 - C3 -4C8H - CTF4_YEAST -
29 PsiBlast_CBE 51.3164% -19 - C4 -3N93 4.7
47 HHSearch 51.2015%-121 - C2 -2KS9 - NK1R_HUMAN -
3 PsiBlast_PDB 50.65100% -27 - C4 -3EHT 3.7 MALE_ECOLI
37 HHSearch 50.6011%-124 - C2 -2Z73 - OPSD_TODPA -
26 PsiBlast_CBE 49.7564% -26 - C4 -3N95 4.1
22 PsiBlast_CBE 49.4295%-142 - C2 -4K5Y - CRFR1_HUMAN (first) -
24 PsiBlast_CBE 49.1564% -22 - C4 -3N96 6.1 CRFR2_HUMAN
27 PsiBlast_CBE 49.0064% -19 - C4 -3N95 3.8 CRFR2_HUMAN
9 PsiBlast_PDB 48.8464% -16 - C4 -3N93 - CRFR2_HUMAN -
25 PsiBlast_CBE 48.5464% -22 - C4 -3N96 4.1 CRFR2_HUMAN
23 PsiBlast_CBE 48.5164% -22 - C4 -3N96 4.9
10 PsiBlast_PDB 48.3064% -20 - C4 -3N95 - CRFR2_HUMAN -
11 PsiBlast_PDB 47.8664% -25 - C4 -3N96 5.0 CRFR2_HUMAN
1 PsiBlast_PDB 47.4195%-133 - C2 -4K5Y - CRFR1_HUMAN (first) -
6 PsiBlast_PDB 44.9250% -4 - C4 -2JND 3.3 CRFR2_MOUSE