@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : FZD2_HUMAN: (2016-01-09 )
MRPRSALPRLLLPLLLLPAAGPAQFHGEKGISIPDHGFCQPISIPLCTDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSPELRFFLCSMYAPVCTVLEQAIPPCRSICERARQGCEALMNKFGFQWPERLRCEHFPRHGAEQICVGQNHSEDGAPALLTTAPPPGLQPGAGGTPGGPGGGGAPPRYATLEHPFHCPRVLKVPSYLSYKFLGERDCAAPCEPARPDGSMFFSQEETRFARLWILTWSVLCCASTFFTVTTYLVDMQRFRYPERPIIFLSGCYTMVSVAYIAGFVLQERVVCNERFSEDGYRTVVQGTKKEGCTILFMMLYFFSMASSIWWVILSLTWFLAAGMKWGHEAIEANSQYFHLAAWAVPAVKTITILAMGQIDGDLLSGVCFVGLNSLDPLRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKTEKLERLMVRIGVFSVLYTVPATIVIACYFYEQAFREHWERSWVSQHCKSLAIPCPAHYTPRMSPDFTVYMIKYLMTLIVGITSGFWIWSGKTLHSWRKFYTRLTNSRHGETTV

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAG_C_8(5BPQ)
FZD4_HUMAN
[Raw transfer]



NAG_D_9(5BPQ)
FZD4_HUMAN
[Raw transfer]



NAG_B_7(5BPQ)
FZD4_HUMAN
[Raw transfer]



NAG_D_8(5BPB)
FZD4_HUMAN
[Raw transfer]



NAG_C_6(5BQE)
FZD4_HUMAN
[Raw transfer]



NAG_A_5(5BPB)
FZD4_HUMAN
[Raw transfer]



NAG_B_3(5BQC)
FZD4_HUMAN
[Raw transfer]



NAG_A_5(5BPQ)
FZD4_HUMAN
[Raw transfer]
42 Fugue 87.4324%-106 - C3 -4JKV - C562_ECOLX (first) -
2 PsiBlast_PDB 81.4030%-137 - C3 -4N4W - SMO_HUMAN -
1 PsiBlast_PDB 78.6630%-138 - C3 -4JKV - C562_ECOLX (first) -
3 PsiBlast_PDB 66.8457%-111 - C5 -4F0A - FZD8_MOUSE -
43 Fugue 66.7352%-116 - C5 -1IJY - FZD8_MOUSE -
44 Fugue 66.4451%-112 * C5 *1IJY - FZD8_MOUSE -
24 HHSearch 66.1250%-109 - C5 -1IJY - FZD8_MOUSE -
4 PsiBlast_PDB 65.5551%-116 - C5 -1IJY - FZD8_MOUSE -
23 PsiBlast_CBE 64.4646%-118 - C5 -5CL1 - ? -
25 HHSearch 64.0644%-111 - C5 -1IJX - SFRP3_MOUSE -
8 PsiBlast_PDB 63.5849%-116 - C5 -1IJX - SFRP3_MOUSE -
14 PsiBlast_PDB 63.5046%-118 - C5 -5CL1 - ? -
7 PsiBlast_PDB 63.3432%-137 - C3 -4QIN - C562_ECOLX (first) -
18 PsiBlast_CBE 62.1439%-108 - C5 -5BPQ 3.3 FZD4_HUMAN
22 PsiBlast_CBE 61.8446%-123 - C5 -5CM4 - ? -
20 PsiBlast_CBE 61.3539%-111 - C5 -5BPQ 2.5 FZD4_HUMAN
21 PsiBlast_CBE 61.0339%-105 - C5 -5BPB 2.5 FZD4_HUMAN
10 PsiBlast_PDB 60.8139%-113 - C5 -5BPQ 2.8 FZD4_HUMAN
5 PsiBlast_PDB 60.7532%-143 - C3 -4O9R - C562_ECOLX (first) -
9 PsiBlast_PDB 60.7039%-115 - C5 -5BPB 3.3 FZD4_HUMAN
12 PsiBlast_PDB 60.0039%-117 - C5 -5BQE 1.8 FZD4_HUMAN
11 PsiBlast_PDB 59.9939%-105 - C5 -5BQC 2.0 FZD4_HUMAN
19 PsiBlast_CBE 59.6439%-105 - C5 -5BPQ 3.0 FZD4_HUMAN