@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : FZD5_HUMAN: (2016-01-09 )
MARPDPSAPPSLLLLLLAQLVGRAAAASKAPVCQEITVPMCRGIGYNLTHMPNQFNHDTQDEAGLEVHQFWPLVEIQCSPDLRFFLCSMYTPICLPDYHKPLPPCRSVCERAKAGCSPLMRQYGFAWPERMSCDRLPVLGRDAEVLCMDYNRSEATTAPPRPFPAKPTLPGPPGAPASGGECPAGGPFVCKCREPFVPILKESHPLYNKVRTGQVPNCAVPCYQPSFSADERTFATFWIGLWSVLCFISTSTTVATFLIDMERFRYPERPIIFLSACYLCVSLGFLVRLVVGHASVACSREHNHIHYETTGPALCTIVFLLVYFFGMASSIWWVILSLTWFLAAGMKWGNEAIAGYAQYFHLAAWLIPSVKSITALALSSVDGDPVAGICYVGNQNLNSLRGFVLGPLVLYLLVGTLFLLAGFVSLFRIRSVIKQGGTKTDKLEKLMIRIGIFTLLYTVPASIVVACYLYEQHYRESWEAALTCACPGHDTGQPRAKPEYWVLMLKYFMCLVVGITSGVWIWSGKTVESWRRFTSRCCCRPRRGHKSGGAMAAGDYPEASAALTGRTGPPGPAATYHKQVSLSHV

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAG_D_8(5CL1)
?
[Raw transfer]




NAG_C_8(5BPQ)
FZD4_HUMAN
[Raw transfer]




NAG_B_7(5BPQ)
FZD4_HUMAN
[Raw transfer]




NAG_D_8(5BPB)
FZD4_HUMAN
[Raw transfer]




OLA_B_15(4JKV)
C562_ECOLX
[Raw transfer]




45 Fugue 87.2524%-109 - C2 -4JKV - C562_ECOLX (first) -
4 PsiBlast_PDB 85.5430%-142 - C2 -4N4W - SMO_HUMAN -
3 PsiBlast_PDB 84.6930%-140 - C2 -4JKV 2.0 C562_ECOLX (first)
27 HHSearch 76.5882%-108 * C2 *1IJY - FZD8_MOUSE -
47 Fugue 75.9483%-105 - C2 -1IJY - FZD8_MOUSE -
46 Fugue 75.7482%-106 - C2 -1IJY - FZD8_MOUSE -
1 PsiBlast_PDB 75.0278%-106 - C2 -1IJY - FZD8_MOUSE -
2 PsiBlast_PDB 73.5782%-107 - C2 -4F0A - FZD8_MOUSE -
51 Fugue 73.2418%-106 - C2 -4PKF - ? -
7 PsiBlast_PDB 68.2133%-139 - C2 -4QIN - C562_ECOLX (first) -
6 PsiBlast_PDB 66.6133%-138 - C2 -4QIM - C562_ECOLX -
5 PsiBlast_PDB 66.0533%-138 - C2 -4O9R - C562_ECOLX (first) -
14 PsiBlast_PDB 63.8537%-109 - C2 -5BQE - FZD4_HUMAN -
28 HHSearch 63.3244%-108 - C2 -1IJX - SFRP3_MOUSE -
13 PsiBlast_PDB 63.2140%-111 - C2 -5CM4 - ? -
26 PsiBlast_CBE 63.0940%-112 - C2 -5CM4 - ? -
12 PsiBlast_PDB 62.8740%-104 - C2 -5CL1 - ? -
21 PsiBlast_CBE 62.8538%-100 - C2 -5BPQ - FZD4_HUMAN -
24 PsiBlast_CBE 62.8338%-102 - C2 -5BPB 3.4 FZD4_HUMAN
25 PsiBlast_CBE 62.8140%-108 - C2 -5CL1 2.8 ?
22 PsiBlast_CBE 62.4738%-106 - C2 -5BPQ 3.0 FZD4_HUMAN
23 PsiBlast_CBE 61.7138%-104 - C2 -5BPQ 3.2 FZD4_HUMAN