@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : GABR1_HUMAN: (2016-01-09 )
MLLLLLLAPLFLRPPGAGGAQTPNATSEGCQIIHPPWEGGIRYRGLTRDQVKAINFLPVDYEIEYVCRGEREVVGPKVRKCLANGSWTDMDTPSRCVRICSKSYLTLENGKVFLTGGDLPALDGARVDFRCDPDFHLVGSSRSICSQGQWSTPKPHCQVNRTPHSERRAVYIGALFPMSGGWPGGQACQPAVEMALEDVNSRRDILPDYELKLIHHDSKCDPGQATKYLYELLYNDPIKIILMPGCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSATLHNPTRVKLFEKWGWKKIATIQQTTEVFTSTLDDLEERVKEAGIEITFRQSFFSDPAVPVKNLKRQDARIIVGLFYETEARKVFCEVYKERLFGKKYVWFLIGWYADNWFKIYDPSINCTVDEMTEAVEGHITTEIVMLNPANTRSISNMTSQEFVEKLTKRLKRHPEETGGFQEAPLAYDAIWALALALNKTSGGGGRSGVRLEDFNYNNQTITDQIYRAMNSSSFEGVSGHVVFDASGSRMAWTLIEQLQGGSYKKIGYYDSTKDDLSWSKTDKWIGGSPPADQTLVIKTFRFLSQKLFISVSVLSSLGIVLAVVCLSFNIYNSHVRYIQNSQPNLNNLTAVGCSLALAAVFPLGLDGYHIGRNQFPFVCQARLWLLGLGFSLGYGSMFTKIWWVHTVFTKKEEKKEWRKTLEPWKLYATVGLLVGMDVLTLAIWQIVDPLHRTIETFAKEEPKEDIDVSILPQLEHCSSRKMNTWLGIFYGYKGLLLLLGIFLAYETKSVSTEKINDHRAVGMAIYNVAVLCLITAPVTMILSSQQDAAFAFASLAIVFSSYITLVVLFVPKMRRLITRGEWQSEAQDTMKTGSSTNNNEEEKSRLLEKENRELEKIIAEKEERVSELRHQLQSRQQLRSRRHPPTPPEPSGGLPRGPPEPPDRLSCDGSRVHLLYK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2C0_A_3(4MS4)
GABR1_HUMAN
[Raw transfer]



ABU_A_3(4MS3)
GABR1_HUMAN
[Raw transfer]



2BQ_A_3(4MQF)
GABR1_HUMAN
[Raw transfer]



2BY_A_3(4MRM)
GABR1_HUMAN
[Raw transfer]



2BX_A_3(4MR9)
GABR1_HUMAN
[Raw transfer]



2BW_A_5(4MR8)
GABR1_HUMAN
[Raw transfer]



2BV_A_3(4MR7)
GABR1_HUMAN
[Raw transfer]



381_A_3(4MS1)
GABR1_HUMAN
[Raw transfer]
7 PsiBlast_PDB 93.58100% -97 - C3 -4MS1 4.5 GABR1_HUMAN
4 PsiBlast_PDB 93.14100% -97 - C3 -4MR8 3.9 GABR1_HUMAN
2 PsiBlast_PDB 93.06100% -98 - C3 -4MQF 4.2 GABR1_HUMAN
1 PsiBlast_PDB 92.99100% -98 - C3 -4MQE - GABR1_HUMAN -
6 PsiBlast_PDB 92.77100% -99 - C3 -4MRM 3.8 GABR1_HUMAN
5 PsiBlast_PDB 92.76100%-100 - C3 -4MR9 4.5 GABR1_HUMAN
3 PsiBlast_PDB 92.52100%-100 - C3 -4MR7 7.2 GABR1_HUMAN
9 PsiBlast_PDB 92.38100%-102 - C3 -4MS4 6.8 GABR1_HUMAN
8 PsiBlast_PDB 90.97100%-101 - C3 -4MS3 3.7 GABR1_HUMAN
25 PsiBlast_CBE 70.4934% -77 - C3 -4MR9 - GABR2_HUMAN -
29 PsiBlast_CBE 70.2034% -79 - C3 -4MQE - GABR2_HUMAN -
23 PsiBlast_CBE 70.1434% -79 - C3 -4MS1 - GABR2_HUMAN -
28 PsiBlast_CBE 69.9834% -80 - C3 -4MQF - GABR2_HUMAN -
26 PsiBlast_CBE 69.9534% -79 - C3 -4MR8 - GABR2_HUMAN -
27 PsiBlast_CBE 69.9434% -78 - C3 -4MR7 - GABR2_HUMAN -
24 PsiBlast_CBE 68.5834% -78 - C3 -4MRM - GABR2_HUMAN -
21 PsiBlast_CBE 68.4534% -80 - C3 -4MS4 - GABR2_HUMAN -
22 PsiBlast_CBE 68.0334% -80 - C3 -4MS3 - GABR2_HUMAN -
11 PsiBlast_PDB 67.3634% -79 - C3 -4F12 - GABR2_HUMAN -
10 PsiBlast_PDB 66.9534% -77 - C3 -4F11 - GABR2_HUMAN -