@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : GLR_HUMAN: (2016-01-09 )
MPPCQPQRPLLLLLLLLACQPQVPSAQVMDFLFEKWKLYGDQCHHNLSLLPPPTELVCNRTFDKYSCWPDTPANTTANISCPWYLPWHHKVQHRFVFKRCGPDGQWVRGPRGQPWRDASQCQMDGEEIEVQKEVAKMYSSFQVMYTVGYSLSLGALLLALAILGGLSKLHCTRNAIHANLFASFVLKASSVLVIDGLLRTRYSQKIGDDLSVSTWLSDGAVAGCRVAAVFMQYGIVANYCWLLVEGLYLHNLLGLATLPERSFFSLYLGIGWGAPMLFVVPWAVVKCLFENVQCWTSNDNMGFWWILRFPVFLAILINFFIFVRIVQLLVAKLRARQMHHTDYKFRLAKSTLTLIPLLGVHEVVFAFVTDEHAQGTLRSAKLFFDLFLSSFQGLLVAVLYCFLNKEVQSELRRRWHRWRLGKVLWEERNTSNHRASSSPGHGPPSKELQFGRGGGSQDSSAETPLAGGLPRLAESPF

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

1Q5_C_18(4K5Y)
CRFR1_HUMAN
[Raw transfer]



1Q5_A_4(4K5Y)
CRFR1_HUMAN
[Raw transfer]
1 PsiBlast_PDB 83.2099%-160 - C3 -4L6R - C562_ECOLX (first) -
53 Fugue 55.5622% -96 - C1 -4K5Y - CRFR1_HUMAN (first) -
2 PsiBlast_PDB 52.09100% -60 - C4 -4ERS - GLR_HUMAN -
3 PsiBlast_PDB 51.2298% -53 - C4 -4LF3 - GLR_HUMAN -
21 PsiBlast_CBE 49.8238%-123 - C3 -4K5Y 5.6 CRFR1_HUMAN
33 HHSearch 49.3110%-133 * C3 *2Z73 - OPSD_TODPA -
56 Fugue 47.0014% -77 - C3 -1U19 - OPSD_BOVIN -
27 HHSearch 46.3043% -48 - C4 -2QKH - GIPR_HUMAN -
9 PsiBlast_PDB 45.7841% -53 - C4 -3C5T - GLP1R_HUMAN -
4 PsiBlast_PDB 45.4443% -45 - C4 -2QKH - GIPR_HUMAN -
8 PsiBlast_PDB 44.7441% -46 - C4 -3C59 - GLP1R_HUMAN -
7 PsiBlast_PDB 44.4341% -46 - C4 -3IOL - GLP1R_HUMAN -
44 HHSearch 44.2712%-124 - C3 -2KS9 - NK1R_HUMAN -
41 HHSearch 44.1311%-115 - C3 -1U19 - OPSD_BOVIN -
5 PsiBlast_PDB 43.1243% -42 - C4 -4HJ0 - GIPR_HUMAN -
58 Fugue 42.059% -67 * C1 *2RDB - ? -
46 HHSearch 42.0213%-127 - C3 -2LNL - CXCR1_HUMAN -
36 HHSearch 39.1311%-139 - C3 -3V2Y - ENLYS_BPT4 -
42 HHSearch 39.1214%-135 - C3 -3PBL - DRD3_HUMAN (first) -
22 PsiBlast_CBE 39.0038%-133 - C3 -4K5Y - CRFR1_HUMAN (first) -
6 PsiBlast_PDB 38.9538%-118 - C3 -4K5Y 6.0 CRFR1_HUMAN (first)