@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : GRM1_HUMAN: (2016-01-10 )
MVGLLLFFFPAIFLEVSLLPRSPGRKVLLAGASSQRSVARMDGDVIIGALFSVHHQPPAEKVPERKCGEIREQYGIQRVEAMFHTLDKINADPVLLPNITLGSEIRDSCWHSSVALEQSIEFIRDSLISIRDEKDGINRCLPDGQSLPPGRTKKPIAGVIGPGSSSVAIQVQNLLQLFDIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARAMLDIVKRYNWTYVSAVHTEGNYGESGMDAFKELAAQEGLCIAHSDKIYSNAGEKSFDRLLRKLRERLPKARVVVCFCEGMTVRGLLSAMRRLGVVGEFSLIGSDGWADRDEVIEGYEVEANGGITIKLQSPEVRSFDDYFLKLRLDTNTRNPWFPEFWQHRFQCRLPGHLLENPNFKRICTGNESLEENYVQDSKMGFVINAIYAMAHGLQNMHHALCPGHVGLCDAMKPIDGSKLLDFLIKSSFIGVSGEEVWFDEKGDAPGRYDIMNLQYTEANRYDYVHVGTWHEGVLNIDDYKIQMNKSGVVRSVCSEPCLKGQIKVIRKGEVSCCWICTACKENEYVQDEFTCKACDLGWWPNADLTGCEPIPVRYLEWSNIESIIAIAFSCLGILVTLFVTLIFVLYRDTPVVKSSSRELCYIILAGIFLGYVCPFTLIAKPTTTSCYLQRLLVGLSSAMCYSALVTKTNRIARILAGSKKKICTRKPRFMSAWAQVIIASILISVQLTLVVTLIIMEPPMPILSYPSIKEVYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAKYIAFTMYTTCIIWLAFVPIYFGSNYKIITTCFAVSLSVTVALGCMFTPKMYIIIAKPERNVRSAFTTSDVVRMHVGDGKLPCRSNTFLNIFRRKKAGAGNANSNGKSVSWSEPGGGQVPKGQHMWHRLSVHVKTNETACNQTAVIKPLTKSYQGSGKSLTFSDTSTKTLYNVEEEEDAQPIRFSPPGSPSMVVHRRVPSAATTPPLPSHLTAEETPLFLAEPALPKGLPPPLQQQQQPPPQQKSLMDQLQGVVSNFSTAIPDFHAVLAGPGGPGNGLRSLYPPPPPPQHLQMLPLQLSTFGEELVSPPADDDDDSERFKLLQEYVYEHEREGNTEEDELEEEEEDLQAASKLTPDDSPALTPPSPFRDSVASGSSVPSSPVSESVLCTPPNVSYASVILRDYKQSSSTL

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GLU_A_9(1EWK)
GRM1_RAT
[Raw transfer]




2CG_F_6(2E4V)
GRM3_RAT
[Raw transfer]




GLU_F_6(2E4U)
GRM3_RAT
[Raw transfer]




GLU_B_9(3LMK)
GRM5_HUMAN
[Raw transfer]




Z99_B_7(3KS9)
GRM1_HUMAN
[Raw transfer]




GLU_E_5(2E4U)
GRM3_RAT
[Raw transfer]




GLU_E_5(2E4U)
GRM3_RAT
[Raw transfer]




C5B_F_6(2E4X)
GRM3_RAT
[Raw transfer]




C5A_F_6(2E4W)
GRM3_RAT
[Raw transfer]




52A_E_5(2E4Y)
GRM3_RAT
[Raw transfer]




Z99_A_7(3SM9)
GRM3_HUMAN
[Raw transfer]




Z99_A_7(3SM9)
GRM3_HUMAN
[Raw transfer]




52Q_A_2(5CNM)
?
[Raw transfer]




MCG_D_4(1ISS)
GRM1_RAT
[Raw transfer]




EPE_B_13(1EWK)
GRM1_RAT
[Raw transfer]




24 PsiBlast_CBE 93.7098%-104 - C1 -1EWK 2.7 GRM1_RAT
73 Fugue 92.8599% -97 - C1 -1EWK 3.6 GRM1_RAT
1 PsiBlast_PDB 92.6498% -97 - C1 -1EWK - GRM1_RAT -
23 PsiBlast_CBE 92.6298%-103 - C1 -1EWT - GRM1_RAT -
21 PsiBlast_CBE 92.5599%-105 - C1 -3KS9 6.3 GRM1_HUMAN
22 PsiBlast_CBE 92.4598%-101 - C1 -1ISS 2.7 GRM1_RAT
4 PsiBlast_PDB 92.0998% -97 - C1 -1ISR - GRM1_RAT -
5 PsiBlast_PDB 91.6798%-102 - C1 -1ISS - GRM1_RAT -
2 PsiBlast_PDB 91.5398%-100 - C1 -1EWT - GRM1_RAT -
3 PsiBlast_PDB 89.6998% -96 - C1 -1EWV - GRM1_RAT -
25 PsiBlast_CBE 84.4270% -92 - C1 -3LMK 4.7 GRM5_HUMAN
6 PsiBlast_PDB 83.7470% -94 - C1 -3LMK - GRM5_HUMAN -
74 Fugue 81.4345% -94 - C1 -2E4U 4.0 GRM3_RAT
8 PsiBlast_PDB 79.8742% -93 - C1 -2E4U - GRM3_RAT -
50 HHSearch 79.4244% -94 - C1 -2E4U 4.0 GRM3_RAT
10 PsiBlast_PDB 79.4142% -92 - C1 -2E4W - GRM3_RAT -
30 PsiBlast_CBE 79.0842% -90 - C1 -2E4V 4.6 GRM3_RAT
9 PsiBlast_PDB 78.9342% -91 - C1 -2E4V - GRM3_RAT -
11 PsiBlast_PDB 78.9242% -89 - C1 -2E4X - GRM3_RAT -
28 PsiBlast_CBE 78.9042% -90 - C1 -2E4X 4.5 GRM3_RAT
29 PsiBlast_CBE 78.8142% -90 - C1 -2E4W 4.1 GRM3_RAT
31 PsiBlast_CBE 78.6542% -92 - C1 -2E4U 4.2 GRM3_RAT
52 HHSearch 75.3944% -96 - C1 -3SM9 7.7 GRM3_HUMAN
18 PsiBlast_PDB 75.1442% -94 - C1 -3SM9 7.7 GRM3_HUMAN
15 PsiBlast_PDB 74.3341% -93 - C1 -5CNM 3.5 ?
27 PsiBlast_CBE 73.1342% -82 - C1 -2E4Y 4.3 GRM3_RAT