@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : GRM2_HUMAN: (2016-01-10 )
MGSLLALLALLLLWGAVAEGPAKKVLTLEGDLVLGGLFPVHQKGGPAEDCGPVNEHRGIQRLEAMLFALDRINRDPHLLPGVRLGAHILDSCSKDTHALEQALDFVRASLSRGADGSRHICPDGSYATHGDAPTAITGVIGGSYSDVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFFQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFELEARARNICVATSEKVGRAMSRAAFEGVVRALLQKPSARVAVLFTRSEDARELLAASQRLNASFTWVASDGWGALESVVAGSEGAAEGAITIELASYPISDFASYFQSLDPWNNSRNPWFREFWEQRFRCSFRQRDCAAHSLRAVPFEQESKIMFVVNAVYAMAHALHNMHRALCPNTTRLCDAMRPVNGRRLYKDFVLNVKFDAPFRPADTHNEVRFDRFGDGIGRYNIFTYLRAGSGRYRYQKVGYWAEGLTLDTSLIPWASPSAGPLPASRCSEPCLQNEVKSVQPGEVCCWLCIPCQPYEYRLDEFTCADCGLGYWPNASLTGCFELPQEYIRWGDAWAVGPVTIACLGALATLFVLGVFVRHNATPVVKASGRELCYILLGGVFLCYCMTFIFIAKPSTAVCTLRRLGLGTAFSVCYSALLTKTNRIARIFGGAREGAQRPRFISPASQVAICLALISGQLLIVVAWLVVEAPGTGKETAPERREVVTLRCNHRDASMLGSLAYNVLLIALCTLYAFKTRKCPENFNEAKFIGFTMYTTCIIWLAFLPIFYVTSSDYRVQTTTMCVSVSLSGSVVLGCLFAPKLHIILFQPQKNVVSHRAPTSRFGSAAARASSSLGQGSGSQFVPTVCNGREVVDSTTSSL

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

52Q_A_4(5CNJ)
?
[Raw transfer]




52Q_B_5(5CNJ)
?
[Raw transfer]




40H_B_4(4XAS)
GRM2_HUMAN
[Raw transfer]




GGL_A_3(5CNI)
?
[Raw transfer]




2CG_E_5(2E4V)
GRM3_RAT
[Raw transfer]




2CG_F_6(2E4V)
GRM3_RAT
[Raw transfer]




40H_A_3(4XAS)
GRM2_HUMAN
[Raw transfer]




GGL_B_8(5CNI)
?
[Raw transfer]




40F_A_2(4XAR)
GRM3_HUMAN
[Raw transfer]




52A_E_5(2E4Y)
GRM3_RAT
[Raw transfer]




GLU_F_6(2E4U)
GRM3_RAT
[Raw transfer]




C5A_E_5(2E4W)
GRM3_RAT
[Raw transfer]




GLU_E_5(2E4U)
GRM3_RAT
[Raw transfer]




GLU_E_5(2E4U)
GRM3_RAT
[Raw transfer]




52A_D_4(2E4Y)
GRM3_RAT
[Raw transfer]




GLU_E_5(2E4U)
GRM3_RAT
[Raw transfer]




C5B_E_5(2E4X)
GRM3_RAT
[Raw transfer]




C5A_F_6(2E4W)
GRM3_RAT
[Raw transfer]




C5B_F_6(2E4X)
GRM3_RAT
[Raw transfer]




GLU_A_2(1ISR)
GRM1_RAT
[Raw transfer]




GLU_A_9(1EWK)
GRM1_RAT
[Raw transfer]




Z99_A_7(3SM9)
GRM3_HUMAN
[Raw transfer]




Z99_A_7(3SM9)
GRM3_HUMAN
[Raw transfer]




GLU_A_9(1EWK)
GRM1_RAT
[Raw transfer]




GLU_A_4(3LMK)
GRM5_HUMAN
[Raw transfer]




GLU_B_9(3LMK)
GRM5_HUMAN
[Raw transfer]




GLU_B_10(1EWK)
GRM1_RAT
[Raw transfer]




52Q_A_2(5CNM)
?
[Raw transfer]




Z99_B_7(3KS9)
GRM1_HUMAN
[Raw transfer]




MCG_C_3(1ISS)
GRM1_RAT
[Raw transfer]




MES_C_3(2E4Z)
GRM7_RAT
[Raw transfer]




MCG_D_4(1ISS)
GRM1_RAT
[Raw transfer]




1 PsiBlast_PDB 88.8399%-105 - C1 -5CNJ 6.9 ?
23 PsiBlast_CBE 88.4899%-105 - C1 -4XAS 6.0 GRM2_HUMAN
3 PsiBlast_PDB 88.2599%-107 - C1 -5CNI 4.6 ?
22 PsiBlast_CBE 87.6599%-105 - C1 -5CNI 4.7 ?
2 PsiBlast_PDB 87.5299%-105 - C1 -4XAS 6.1 GRM2_HUMAN
21 PsiBlast_CBE 87.2999%-105 - C1 -5CNJ 7.2 ?
7 PsiBlast_PDB 83.7766% -96 - C1 -2E4X 4.8 GRM3_RAT
6 PsiBlast_PDB 83.1466%-100 - C1 -2E4W 4.5 GRM3_RAT
8 PsiBlast_PDB 82.9966% -94 - C1 -2E4Y 4.5 GRM3_RAT
58 Fugue 82.7868% -98 - C1 -2E4U 4.0 GRM3_RAT
37 HHSearch 82.6968%-106 - C1 -3SM9 8.0 GRM3_HUMAN
5 PsiBlast_PDB 82.5966% -98 - C1 -2E4V 4.8 GRM3_RAT
26 PsiBlast_CBE 82.4866% -97 - C1 -2E4W 4.4 GRM3_RAT
4 PsiBlast_PDB 82.4866%-100 - C1 -2E4U 4.0 GRM3_RAT
36 HHSearch 82.4367% -99 - C1 -2E4U 4.0 GRM3_RAT
27 PsiBlast_CBE 82.3366% -95 - C1 -2E4V 4.9 GRM3_RAT
12 PsiBlast_PDB 82.3067%-106 - C1 -3SM9 8.0 GRM3_HUMAN
25 PsiBlast_CBE 82.0566% -95 - C1 -2E4X 4.6 GRM3_RAT
28 PsiBlast_CBE 81.7566% -97 - C1 -2E4U 4.3 GRM3_RAT
11 PsiBlast_PDB 79.5167%-105 - C1 -5CNM 4.7 ?
9 PsiBlast_PDB 77.9367% -96 - C1 -4XAR 6.0 GRM3_HUMAN
24 PsiBlast_CBE 77.1966% -92 - C1 -2E4Y 4.6 GRM3_RAT
32 PsiBlast_CBE 71.3842% -96 - C1 -1EWK 2.2 GRM1_RAT
30 PsiBlast_CBE 71.3242% -93 - C1 -1ISS 3.1 GRM1_RAT
13 PsiBlast_PDB 70.9542% -97 - C1 -2E4Z 3.4 GRM7_RAT
33 PsiBlast_CBE 70.5841% -93 - C1 -3KS9 4.7 GRM1_HUMAN
18 PsiBlast_PDB 70.4542% -93 - C1 -1ISS 2.9 GRM1_RAT
59 Fugue 69.5644% -81 * C1 *1EWK 3.1 GRM1_RAT
14 PsiBlast_PDB 69.3742% -86 - C1 -1EWK 3.1 GRM1_RAT
17 PsiBlast_PDB 68.8842% -88 - C1 -1ISR 3.1 GRM1_RAT
19 PsiBlast_PDB 68.7939% -88 - C1 -3LMK 3.1 GRM5_HUMAN
34 PsiBlast_CBE 68.3539% -86 - C1 -3LMK 4.0 GRM5_HUMAN