@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : GRM4_HUMAN: (2016-01-10 )
MPGKRGLGWWWARLPLCLLLSLYGPWMPSSLGKPKGHPHMNSIRIDGDITLGGLFPVHGRGSEGKPCGELKKEKGIHRLEAMLFALDRINNDPDLLPNITLGARILDTCSRDTHALEQSLTFVQALIEKDGTEVRCGSGGPPIITKPERVVGVIGASGSSVSIMVANILRLFKIPQISYASTAPDLSDNSRYDFFSRVVPSDTYQAQAMVDIVRALKWNYVSTVASEGSYGESGVEAFIQKSREDGGVCIAQSVKIPREPKAGEFDKIIRRLLETSNARAVIIFANEDDIRRVLEAARRANQTGHFFWMGSDSWGSKIAPVLHLEEVAEGAVTILPKRMSVRGFDRYFSSRTLDNNRRNIWFAEFWEDNFHCKLSRHALKKGSHVKKCTNRERIGQDSAYEQEGKVQFVIDAVYAMGHALHAMHRDLCPGRVGLCPRMDPVDGTQLLKYIRNVNFSGIAGNPVTFNENGDAPGRYDIYQYQLRNDSAEYKVIGSWTDHLHLRIERMHWPGSGQQLPRSICSLPCQPGERKKTVKGMPCCWHCEPCTGYQYQVDRYTCKTCPYDMRPTENRTGCRPIPIIKLEWGSPWAVLPLFLAVVGIAATLFVVITFVRYNDTPIVKASGRELSYVLLAGIFLCYATTFLMIAEPDLGTCSLRRIFLGLGMSISYAALLTKTNRIYRIFEQGKRSVSAPRFISPASQLAITFSLISLQLLGICVWFVVDPSHSVVDFQDQRTLDPRFARGVLKCDISDLSLICLLGYSMLLMVTCTVYAIKTRGVPETFNEAKPIGFTMYTTCIVWLAFIPIFFGTSQSADKLYIQTTTLTVSVSLSASVSLGMLYMPKVYIILFHPEQNVPKRKRSLKAVVTAATMSNKFTQKGNFRPNGEAKSELCENLEAPALATKQTYVTYTNHAI

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

52Q_B_5(5CNJ)
?
[Raw transfer]



52Q_A_4(5CNJ)
?
[Raw transfer]



2CG_F_6(2E4V)
GRM3_RAT
[Raw transfer]



2CG_E_5(2E4V)
GRM3_RAT
[Raw transfer]



40H_B_4(4XAS)
GRM2_HUMAN
[Raw transfer]



GGL_A_3(5CNI)
?
[Raw transfer]



40F_A_2(4XAR)
GRM3_HUMAN
[Raw transfer]



40H_A_3(4XAS)
GRM2_HUMAN
[Raw transfer]



GLU_F_6(2E4U)
GRM3_RAT
[Raw transfer]



GGL_B_8(5CNI)
?
[Raw transfer]



C5A_F_6(2E4W)
GRM3_RAT
[Raw transfer]



C5B_F_6(2E4X)
GRM3_RAT
[Raw transfer]



C5A_E_5(2E4W)
GRM3_RAT
[Raw transfer]



GLU_E_5(2E4U)
GRM3_RAT
[Raw transfer]



C5B_E_5(2E4X)
GRM3_RAT
[Raw transfer]



GLU_E_5(2E4U)
GRM3_RAT
[Raw transfer]



GLU_E_5(2E4U)
GRM3_RAT
[Raw transfer]



52A_E_5(2E4Y)
GRM3_RAT
[Raw transfer]



52A_D_4(2E4Y)
GRM3_RAT
[Raw transfer]



Z99_A_7(3SM9)
GRM3_HUMAN
[Raw transfer]



Z99_A_7(3SM9)
GRM3_HUMAN
[Raw transfer]



52Q_A_2(5CNM)
?
[Raw transfer]



MES_C_3(2E4Z)
GRM7_RAT
[Raw transfer]
1 PsiBlast_PDB 93.0868% -99 - C1 -2E4Z 2.2 GRM7_RAT
38 HHSearch 83.9248% -96 - C1 -3SM9 7.6 GRM3_HUMAN
10 PsiBlast_PDB 83.8247% -97 - C1 -3SM9 7.6 GRM3_HUMAN
60 Fugue 83.7748% -81 - C1 -2E4U 4.9 GRM3_RAT
2 PsiBlast_PDB 83.3446% -85 - C1 -2E4U 4.9 GRM3_RAT
4 PsiBlast_PDB 83.2746% -85 - C1 -2E4W 4.4 GRM3_RAT
25 PsiBlast_CBE 83.1546% -86 - C1 -2E4U 4.2 GRM3_RAT
24 PsiBlast_CBE 82.7646% -84 - C1 -2E4V 4.5 GRM3_RAT
23 PsiBlast_CBE 82.6746% -84 - C1 -2E4W 4.4 GRM3_RAT
22 PsiBlast_CBE 82.5946% -83 - C1 -2E4X 4.5 GRM3_RAT
6 PsiBlast_PDB 82.5946% -80 - C1 -2E4Y 4.0 GRM3_RAT
3 PsiBlast_PDB 82.5146% -82 - C1 -2E4V 4.6 GRM3_RAT
37 HHSearch 82.4647% -84 - C1 -2E4U 4.9 GRM3_RAT
5 PsiBlast_PDB 82.3046% -80 - C1 -2E4X 4.7 GRM3_RAT
32 PsiBlast_CBE 81.6945% -91 - C1 -1EWT - GRM1_RAT -
34 PsiBlast_CBE 80.8844% -90 - C1 -3KS9 - GRM1_HUMAN -
59 Fugue 80.6645% -82 - C1 -1EWK - GRM1_RAT -
33 PsiBlast_CBE 80.5745% -89 - C1 -1EWK - GRM1_RAT -
14 PsiBlast_PDB 80.1345% -80 - C1 -1EWK - GRM1_RAT -
11 PsiBlast_PDB 80.0144% -96 - C1 -5CNJ 6.7 ?
9 PsiBlast_PDB 79.6746% -96 - C1 -5CNM 4.0 ?
7 PsiBlast_PDB 78.8346% -88 - C1 -4XAR 5.3 GRM3_HUMAN
13 PsiBlast_PDB 77.9944% -90 - C1 -5CNI 4.4 ?
21 PsiBlast_CBE 77.6546% -82 - C1 -2E4Y 4.3 GRM3_RAT
29 PsiBlast_CBE 77.5544% -89 - C1 -5CNI 4.6 ?
12 PsiBlast_PDB 76.8544% -91 - C1 -4XAS 4.9 GRM2_HUMAN
28 PsiBlast_CBE 76.6244% -93 - C1 -5CNJ 6.2 ?
30 PsiBlast_CBE 76.1844% -91 - C1 -4XAS 5.5 GRM2_HUMAN