@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : GRM6_HUMAN: (2016-01-10 )
MARPRRAREPLLVALLPLAWLAQAGLARAAGSVRLAGGLTLGGLFPVHARGAAGRACGQLKKEQGVHRLEAMLYALDRVNADPELLPGVRLGARLLDTCSRDTYALEQALSFVQALIRGRGDGDEVGVRCPGGVPPLRPAPPERVVAVVGASASSVSIMVANVLRLFAIPQISYASTAPELSDSTRYDFFSRVVPPDSYQAQAMVDIVRALGWNYVSTLASEGNYGESGVEAFVQISREAGGVCIAQSIKIPREPKPGEFSKVIRRLMETPNARGIIIFANEDDIRRVLEAARQANLTGHFLWVGSDSWGAKTSPILSLEDVAVGAITILPKRASIDGFDQYFMTRSLENNRRNIWFAEFWEENFNCKLTSSGTQSDDSTRKCTGEERIGRDSTYEQEGKVQFVIDAVYAIAHALHSMHQALCPGHTGLCPAMEPTDGRMLLQYIRAVRFNGSAGTPVMFNENGDAPGRYDIFQYQATNGSASSGGYQAVGQWAETLRLDVEALQWSGDPHEVPSSLCSLPCGPGERKKMVKGVPCCWHCEACDGYRFQVDEFTCEACPGDMRPTPNHTGCRPTPVVRLSWSSPWAAPPLLLAVLGIVATTTVVATFVRYNNTPIVRASGRELSYVLLTGIFLIYAITFLMVAEPGAAVCAARRLFLGLGTTLSYSALLTKTNRIYRIFEQGKRSVTPPPFISPTSQLVITFSLTSLQVVGMIAWLGARPPHSVIDYEEQRTVDPEQARGVLKCDMSDLSLIGCLGYSLLLMVTCTVYAIKARGVPETFNEAKPIGFTMYTTCIIWLAFVPIFFGTAQSAEKIYIQTTTLTVSLSLSASVSLGMLYVPKTYVILFHPEQNVQKRKRSLKATSTVAAPPKGEDAEAHK

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

52Q_B_5(5CNJ)
?
[Raw transfer]



2CG_F_6(2E4V)
GRM3_RAT
[Raw transfer]



52Q_A_4(5CNJ)
?
[Raw transfer]



2CG_E_5(2E4V)
GRM3_RAT
[Raw transfer]



GGL_A_3(5CNI)
?
[Raw transfer]



40H_B_4(4XAS)
GRM2_HUMAN
[Raw transfer]



40F_A_2(4XAR)
GRM3_HUMAN
[Raw transfer]



40H_A_3(4XAS)
GRM2_HUMAN
[Raw transfer]



GGL_B_8(5CNI)
?
[Raw transfer]



GLU_F_6(2E4U)
GRM3_RAT
[Raw transfer]



C5A_E_5(2E4W)
GRM3_RAT
[Raw transfer]



C5B_F_6(2E4X)
GRM3_RAT
[Raw transfer]



C5A_F_6(2E4W)
GRM3_RAT
[Raw transfer]



GLU_E_5(2E4U)
GRM3_RAT
[Raw transfer]



GLU_E_5(2E4U)
GRM3_RAT
[Raw transfer]



C5B_E_5(2E4X)
GRM3_RAT
[Raw transfer]



52A_E_5(2E4Y)
GRM3_RAT
[Raw transfer]



GLU_E_5(2E4U)
GRM3_RAT
[Raw transfer]



52A_D_4(2E4Y)
GRM3_RAT
[Raw transfer]



GLU_B_9(3LMK)
GRM5_HUMAN
[Raw transfer]



Z99_A_7(3SM9)
GRM3_HUMAN
[Raw transfer]



Z99_A_7(3SM9)
GRM3_HUMAN
[Raw transfer]



52Q_A_2(5CNM)
?
[Raw transfer]



GLU_B_10(1EWK)
GRM1_RAT
[Raw transfer]



Z99_B_7(3KS9)
GRM1_HUMAN
[Raw transfer]



MES_C_3(2E4Z)
GRM7_RAT
[Raw transfer]



MCG_C_3(1ISS)
GRM1_RAT
[Raw transfer]



MCG_D_4(1ISS)
GRM1_RAT
[Raw transfer]
1 PsiBlast_PDB 93.7166%-110 - C1 -2E4Z 2.2 GRM7_RAT
59 Fugue 87.1248% -94 - C1 -2E4U 3.9 GRM3_RAT
10 PsiBlast_PDB 86.1346%-105 - C1 -3SM9 7.6 GRM3_HUMAN
38 HHSearch 86.0948%-102 - C1 -3SM9 7.6 GRM3_HUMAN
37 HHSearch 85.8547% -97 - C1 -2E4U 4.0 GRM3_RAT
22 PsiBlast_CBE 85.5845% -93 - C1 -2E4X 4.4 GRM3_RAT
4 PsiBlast_PDB 85.3245% -95 - C1 -2E4W 4.4 GRM3_RAT
2 PsiBlast_PDB 85.2545% -97 - C1 -2E4U 4.0 GRM3_RAT
6 PsiBlast_PDB 85.2245% -92 - C1 -2E4Y 3.4 GRM3_RAT
3 PsiBlast_PDB 85.1645% -93 - C1 -2E4V 4.5 GRM3_RAT
25 PsiBlast_CBE 84.9545% -97 - C1 -2E4U 4.2 GRM3_RAT
24 PsiBlast_CBE 84.8545% -93 - C1 -2E4V 4.6 GRM3_RAT
5 PsiBlast_PDB 84.8245% -91 - C1 -2E4X 4.6 GRM3_RAT
23 PsiBlast_CBE 84.7745% -94 - C1 -2E4W 4.4 GRM3_RAT
9 PsiBlast_PDB 82.7746%-104 - C1 -5CNM 3.6 ?
8 PsiBlast_PDB 80.8546% -96 - C1 -5CNK - ? -
29 PsiBlast_CBE 80.5246% -94 - C1 -5CNI 4.6 ?
12 PsiBlast_PDB 80.5246% -97 - C1 -4XAS 5.0 GRM2_HUMAN
11 PsiBlast_PDB 80.5146% -97 - C1 -5CNJ 6.6 ?
26 PsiBlast_CBE 80.4746% -97 - C1 -5CNK - ? -
13 PsiBlast_PDB 79.9946% -94 - C1 -5CNI 4.5 ?
28 PsiBlast_CBE 79.5446% -96 - C1 -5CNJ 6.3 ?
21 PsiBlast_CBE 79.2845% -92 - C1 -2E4Y 4.0 GRM3_RAT
7 PsiBlast_PDB 79.1846% -96 - C1 -4XAR 5.3 GRM3_HUMAN
33 PsiBlast_CBE 78.6541% -95 - C1 -1EWK 2.9 GRM1_RAT
30 PsiBlast_CBE 78.3146% -95 - C1 -4XAS 5.5 GRM2_HUMAN
34 PsiBlast_CBE 77.5840% -98 - C1 -3KS9 5.1 GRM1_HUMAN
31 PsiBlast_CBE 77.3741% -97 - C1 -1ISS 2.9 GRM1_RAT
18 PsiBlast_PDB 75.9841% -97 - C1 -1ISS 2.2 GRM1_RAT
35 PsiBlast_CBE 74.8039% -91 - C1 -3LMK 4.5 GRM5_HUMAN