@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : OPRM_HUMAN: (2016-01-12 )
MDSSAAPTNASNCTDALAYSSCSPAPSPGSWVNLSHLDGNLSDPCGPNRTDLGGRDSLCPPTGSPSMITAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATSTLPFQSVNYLMGTWPFGTILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIINVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALVTIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIPTSSNIEQQNSTRIRQNTRDHPSTANTVDRTNHQLENLEAETAPLP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CLR_A_6(5C1M)
?
[Raw transfer]



OLA_A_7(4RWD)
C562_ECOLX
[Raw transfer]



OLA_A_6(4N6H)
C562_ECOLX
[Raw transfer]
1 PsiBlast_PDB 90.3797%-161 - C3 -5C1M 7.2 ?
5 PsiBlast_PDB 84.9171%-163 - C3 -4RWD 3.6 C562_ECOLX (first)
21 PsiBlast_CBE 84.9071%-163 - C3 -4RWD - C562_ECOLX (first) -
3 PsiBlast_PDB 83.8870%-164 - C3 -4N6H 4.3 C562_ECOLX (first)
22 PsiBlast_CBE 82.9871%-164 - C3 -4RWA - C562_ECOLX (first) -
4 PsiBlast_PDB 82.9671%-164 - C3 -4RWA - C562_ECOLX (first) -
23 PsiBlast_CBE 79.7860%-163 - C3 -4EA3 - C562_ECOLX (first) -
6 PsiBlast_PDB 78.5460%-158 - C3 -4EA3 - C562_ECOLX (first) -
26 HHSearch 73.4726%-144 - C3 -3ODU - CXCR4_HUMAN (first) -
33 HHSearch 72.1427%-145 - C3 -3RZE - ENLYS_BPT4 (first) -
29 HHSearch 71.8426%-143 - C3 -3UON - ACM2_HUMAN (first) -
9 PsiBlast_PDB 70.9324%-158 - C3 -4MBS - CCR5_HUMAN (first) -
50 Fugue 70.0622%-104 - C3 -3ODU - CXCR4_HUMAN (first) -
37 HHSearch 69.6425%-151 * C3 *3PBL - DRD3_HUMAN (first) -
49 Fugue 69.5328%-134 - C3 -4XNV - P2RY1_HUMAN (first) -
20 PsiBlast_PDB 66.1327%-135 - C3 -4XNW - RUBR_CLOPA -
35 HHSearch 66.0722%-140 - C3 -3EML - ENLYS_BPT4 -
2 PsiBlast_PDB 66.0192%-158 - C3 -4DKL - ENLYS_BPT4 (first) -
28 HHSearch 65.9325%-139 - C3 -2RH1 - ADRB2_HUMAN (first) -
19 PsiBlast_PDB 65.8727%-132 - C3 -4XNV - P2RY1_HUMAN -