@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : OPSR_HUMAN: (2016-01-12 )
MAQQWSLQRLAGRHPQDSYEDSTQSSIFTYTNSNSTRGPFEGPNYHIAPRWVYHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIASTISIVNQVSGYFVLGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGNVRFDAKLAIVGIAFSWIWSAVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQVWLAIRAVAKQQKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQLFGKKVDDGSELSSASKTEVSSVSSVSPA

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BNG_A_7(1HZX)
OPSD_BOVIN
[Raw transfer]



HTG_A_17(3OAX)
OPSD_BOVIN
[Raw transfer]



HTO_B_26(2PED)
OPSD_BOVIN
[Raw transfer]



HTO_B_26(2HPY)
OPSD_BOVIN
[Raw transfer]



HTO_B_26(1U19)
OPSD_BOVIN
[Raw transfer]



HTO_B_26(2G87)
OPSD_BOVIN
[Raw transfer]



PLM_A_13(3CAP)
OPSD_BOVIN
[Raw transfer]
8 PsiBlast_PDB 92.5842%-138 - C10 -4PXF - OPSD_BOVIN -
41 Fugue 92.4941%-115 - C10 -1F88 - OPSD_BOVIN -
7 PsiBlast_PDB 92.2042%-133 - C10 -4J4Q - GNAT1_BOVIN (first) -
6 PsiBlast_PDB 92.2042%-137 - C10 -3PXO - OPSD_BOVIN -
3 PsiBlast_PDB 92.1642%-116 - C10 -1F88 - OPSD_BOVIN -
4 PsiBlast_PDB 91.9942%-137 - C10 -3DQB - GNAT1_BOVIN (first) -
22 PsiBlast_CBE 91.7542%-134 - C10 -3CAP 2.9 OPSD_BOVIN
5 PsiBlast_PDB 91.2242%-135 - C10 -3PQR - OPSD_BOVIN -
33 PsiBlast_CBE 91.1342%-127 - C10 -1F88 - OPSD_BOVIN -
1 PsiBlast_PDB 91.0242%-135 - C10 -3CAP - OPSD_BOVIN -
2 PsiBlast_PDB 90.5442% -98 - C- -3C9L - OPSD_BOVIN -
20 PsiBlast_PDB 89.6242%-124 - C- -3C9M - OPSD_BOVIN -
13 PsiBlast_PDB 89.1042%-100 - C- -2I35 - OPSD_BOVIN -
25 PsiBlast_CBE 88.8542%-124 - C10 -2I37 - OPSD_BOVIN -
24 PsiBlast_CBE 88.5442%-126 - C10 -2I37 - OPSD_BOVIN -
14 PsiBlast_PDB 88.3542%-125 - C10 -2I37 - OPSD_BOVIN -
29 PsiBlast_CBE 88.1342% -97 - C10 -1U19 2.4 OPSD_BOVIN
17 PsiBlast_PDB 87.9742% -96 - C10 -2G87 - OPSD_BOVIN -
19 PsiBlast_PDB 87.5342% -96 - C10 -1U19 - OPSD_BOVIN -
23 PsiBlast_CBE 87.5142% -99 - C10 -2PED 3.3 OPSD_BOVIN
9 PsiBlast_PDB 87.2242% -98 - C10 -3OAX 2.7 OPSD_BOVIN
28 PsiBlast_CBE 86.8642% -95 - C10 -2G87 2.4 OPSD_BOVIN
11 PsiBlast_PDB 86.0242%-101 - C10 -1HZX 3.7 OPSD_BOVIN
27 PsiBlast_CBE 85.8642% -94 - C10 -2HPY 3.4 OPSD_BOVIN