@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : S1PR3_HUMAN: (2016-01-14 )
MATALPPRLQPVRGNETLREHYQYVGKLAGRLKEASEGSTLTTVLFLVICSFIVLENLMVLIAIWKNNKFHNRMYFFIGNLALCDLLAGIAYKVNILMSGKKTFSLSPTVWFLREGSMFVALGASTCSLLAIAIERHLTMIKMRPYDANKRHRVFLLIGMCWLIAFTLGALPILGWNCLHNLPDCSTILPLYSKKYIAFCISIFTAILVTIVILYARIYFLVKSSSRKVANHNNSERSMALLRTVVIVVSVFIACWSPLFILFLIDVACRVQACPILFKAQWFIVLAVLNSAMNPVIYTLASKEMRRAFFRLVCNCLVRGRGARASPIQPALDPSRSKSSSSNNSSHSPKVKEDLPHTAPSSCIMDKNAALQNGIFCN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ML5_A_2(3V2Y)
ENLYS_BPT4
[Raw transfer]




27 HHSearch 93.3757%-193 - C1 -3V2Y 6.3 ENLYS_BPT4
1 PsiBlast_PDB 78.3242%-173 - C1 -3V2W - ENLYS_BPT4 (first) -
2 PsiBlast_PDB 77.7242%-173 - C1 -3V2Y - ENLYS_BPT4 -
34 HHSearch 75.8723%-174 - C1 -3EML - ENLYS_BPT4 -
35 HHSearch 74.1925%-165 - C1 -3PBL - DRD3_HUMAN (first) -
20 PsiBlast_PDB 73.1727%-171 - C1 -2YCZ - ADRB1_MELGA -
19 PsiBlast_PDB 72.4527%-170 - C1 -2YCX - ADRB1_MELGA -
33 HHSearch 72.4323%-159 - C1 -2RH1 - ADRB2_HUMAN (first) -
18 PsiBlast_PDB 71.9027%-175 - C1 -2YCW - ADRB1_MELGA -
47 Fugue 71.8118%-121 - C1 -1F88 - OPSD_BOVIN -
32 HHSearch 71.3823%-163 - C1 -3RZE - ENLYS_BPT4 (first) -
17 PsiBlast_PDB 70.4427%-181 - C1 -2VT4 - ADRB1_MELGA -
13 PsiBlast_PDB 68.9225%-154 - C1 -3REY - AA2AR_HUMAN -
12 PsiBlast_PDB 68.4725%-152 - C1 -3PWH - ? -
15 PsiBlast_PDB 68.2525%-156 - C1 -3UZA - AA2AR_HUMAN -
29 HHSearch 67.5821%-160 - C1 -3UON - ACM2_HUMAN (first) -
16 PsiBlast_PDB 67.5625%-154 - C1 -3UZC - AA2AR_HUMAN -
14 PsiBlast_PDB 66.3125%-153 - C1 -3RFM - AA2AR_HUMAN -
9 PsiBlast_PDB 65.6325%-147 - C1 -4UHR - AA2AR_HUMAN -
7 PsiBlast_PDB 65.5425%-151 - C1 -2YDV - ? -