@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : BRAF_HUMAN: (2015-06-17 )
MAALSGGGGGGAEPGQALFNGDMEPEAGAGAGAAASSAADPAIPEEVWNIKQMIKLTQEHIEALLDKFGGEHNPPSIYLEAYEEYTSKLDALQQREQQLLESLGNGTDFSVSSSASMDTVTSSSSSSLSVLPSSLSVFQNPTDVARSNPKSPQKPIVRVFLPNKQRTVVPARCGVTVRDSLKKALMMRGLIPECCAVYRIQDGEKKPIGWDTDISWLTGEELHVEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGFRCQTCGYKFHQRCSTEVPLMCVNYDQLDLLFVSKFFEHHPIPQEEASLAETALTSGSSPSAPASDSIGPQILTSPSPSKSIPIPQPFRPADEDHRNQFGQRDRSSSAPNVHINTIEPVNIDDLIRDQGFRGDGGSTTGLSATPPASLPGSLTNVKALQKSPGPQRERKSSSSSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHRSASEPSLNRAGFQTEDFSLYACASPKTPIQAGGYGAFPVH

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FNI_A_3(3PPK)
BRAF_HUMAN
[Raw transfer]




RI9_A_3(4EHG)
BRAF_HUMAN
[Raw transfer]




0WP_B_4(4G9C)

[Raw transfer]




L1E_B_3(3IDP)

[Raw transfer]




L1E_A_4(3IDP)
BRAF_HUMAN
[Raw transfer]




TV4_A_3(3TV4)
BRAF_HUMAN
[Raw transfer]




0WP_A_3(4G9C)
BRAF_HUMAN
[Raw transfer]




T1Q_A_3(4E4X)
BRAF_HUMAN
[Raw transfer]




FNI_B_4(3PPK)

[Raw transfer]




SM6_A_3(3PSB)
BRAF_HUMAN
[Raw transfer]




RI9_B_4(4EHG)

[Raw transfer]




1SU_A_3(4KSP)
BRAF_HUMAN
[Raw transfer]




BR2_B_4(3SKC)

[Raw transfer]




FP4_B_4(3PRI)

[Raw transfer]




FOI_B_4(3PPJ)

[Raw transfer]




FOI_A_3(3PPJ)
BRAF_HUMAN
[Raw transfer]




SM5_B_4(3D4Q)

[Raw transfer]




SM6_B_4(3PSB)

[Raw transfer]




B0R_B_4(3TV6)

[Raw transfer]




BAX_A_3(1UWH)
BRAF_HUMAN
[Raw transfer]




SM7_A_3(3PSD)
BRAF_HUMAN
[Raw transfer]




B1E_B_4(4G9R)

[Raw transfer]




RI8_B_4(4EHE)

[Raw transfer]




FP4_A_3(3PRI)
BRAF_HUMAN
[Raw transfer]




TV4_B_4(3TV4)

[Raw transfer]




SM5_A_3(3D4Q)
BRAF_HUMAN
[Raw transfer]




SM7_B_4(3PSD)

[Raw transfer]




BAX_B_4(1UWH)

[Raw transfer]




10Z_A_4(4H58)
BRAF_HUMAN
[Raw transfer]




FP3_B_4(3PRF)

[Raw transfer]




B96_C_7(4JVG)
BRAF_HUMAN
[Raw transfer]




B96_B_5(4JVG)
BRAF_HUMAN
[Raw transfer]




032_A_3(3OG7)
BRAF_HUMAN
[Raw transfer]




FP3_A_3(3PRF)
BRAF_HUMAN
[Raw transfer]




SM5_B_4(3OMV)

[Raw transfer]




B96_D_8(4JVG)

[Raw transfer]




B96_A_6(4JVG)
BRAF_HUMAN
[Raw transfer]




BAX_B_4(1UWJ)

[Raw transfer]




BAX_A_3(1UWJ)
BRAF_HUMAN
[Raw transfer]




324_B_4(3C4C)

[Raw transfer]




831_A_3(3II5)
BRAF_HUMAN
[Raw transfer]




324_A_3(3C4C)
BRAF_HUMAN
[Raw transfer]




SM5_A_3(3OMV)
RAF1_HUMAN
[Raw transfer]




734_A_3(4E26)
BRAF_HUMAN
[Raw transfer]




831_B_6(3II5)

[Raw transfer]




734_B_4(4E26)

[Raw transfer]




STU_A_3(3P86)
CTR1_ARATH
[Raw transfer]




5 PsiBlast_PDB 94.08100%-117 - C2 -3PSB 7.5 BRAF_HUMAN
17 PsiBlast_PDB 93.71100%-118 - C2 -4G9C 9.5 BRAF_HUMAN
48 PsiBlast_CBE 93.53100%-122 - C2 -4H58 7.3 BRAF_HUMAN
47 PsiBlast_CBE 93.49100%-118 - C2 -4KSP 9.8 BRAF_HUMAN
15 PsiBlast_PDB 93.30100%-116 - C2 -4E26 5.1 BRAF_HUMAN
27 PsiBlast_CBE 93.29100%-115 - C2 -4EHE 8.2
38 PsiBlast_CBE 93.18100%-115 - C2 -3PPJ 7.4
26 PsiBlast_CBE 93.15100%-120 - C2 -4G9C 9.9
29 PsiBlast_CBE 93.08100%-118 - C2 -4E26 3.7
11 PsiBlast_PDB 92.96100%-117 - C2 -3PSD 8.3 BRAF_HUMAN
7 PsiBlast_PDB 92.83100%-121 - C2 -3PPK 9.0 BRAF_HUMAN
43 PsiBlast_CBE 92.7499%-117 - C2 -3IDP 10.8
6 PsiBlast_PDB 92.72100%-115 - C2 -3PPJ 7.6 BRAF_HUMAN
36 PsiBlast_CBE 92.57100%-119 - C2 -3PRF 7.3
16 PsiBlast_PDB 92.51100%-123 - C2 -4E4X 9.9 BRAF_HUMAN
13 PsiBlast_PDB 92.45100%-119 - C2 -3TV4 7.8 BRAF_HUMAN
24 PsiBlast_CBE 92.43100%-119 - C2 -3II5 10.1
8 PsiBlast_PDB 92.41100%-122 - C2 -3PRF 8.3 BRAF_HUMAN
33 PsiBlast_CBE 92.39100%-116 - C2 -3PSD 8.2
31 PsiBlast_CBE 92.22100%-117 - C2 -3TV4 7.8
42 PsiBlast_CBE 91.8099%-119 - C2 -4EHG 7.7 BRAF_HUMAN
30 PsiBlast_CBE 91.65100%-116 - C2 -3TV6 8.6
39 PsiBlast_CBE 91.61100%-117 - C2 -3D4Q 6.6
44 PsiBlast_CBE 91.4399%-117 - C2 -3IDP 10.8 BRAF_HUMAN
37 PsiBlast_CBE 91.33100%-117 - C2 -3PPK 8.4
34 PsiBlast_CBE 91.11100%-117 - C2 -3PSB 7.7
49 PsiBlast_CBE 91.0799%-118 - C2 -1UWH 9.0
50 PsiBlast_CBE 90.8399%-117 - C2 -1UWH 9.1 BRAF_HUMAN
32 PsiBlast_CBE 90.81100%-113 - C2 -3SKC 9.3
41 PsiBlast_CBE 90.6399%-120 - C2 -4EHG 8.7
4 PsiBlast_PDB 90.45100%-115 - C2 -3D4Q 7.0 BRAF_HUMAN
3 PsiBlast_PDB 89.59100%-114 - C2 -3II5 10.4 BRAF_HUMAN
59 PsiBlast_CBE 89.3793%-118 - C2 -3OG7 9.8 BRAF_HUMAN
40 PsiBlast_CBE 89.2099%-111 - C2 -4G9R 10.9
55 PsiBlast_CBE 88.6694%-118 - C2 -4JVG 9.1 BRAF_HUMAN
35 PsiBlast_CBE 88.66100%-115 - C2 -3PRI 7.7
9 PsiBlast_PDB 88.65100%-115 - C2 -3PRI 7.5 BRAF_HUMAN
51 PsiBlast_CBE 88.2899%-108 - C2 -1UWJ 8.8
54 PsiBlast_CBE 87.2494%-114 - C2 -4JVG 8.4 BRAF_HUMAN
53 PsiBlast_CBE 86.8594%-114 - C2 -4JVG 8.6
56 PsiBlast_CBE 86.8094%-116 - C2 -4JVG 8.4 BRAF_HUMAN
58 PsiBlast_CBE 86.5294%-106 - C2 -3C4C 8.2 BRAF_HUMAN
57 PsiBlast_CBE 86.0594%-116 - C2 -3C4C 6.1
52 PsiBlast_CBE 85.9999%-110 - C2 -1UWJ 9.4 BRAF_HUMAN
61 PsiBlast_CBE 84.6177%-117 - C2 -3OMV 4.4 RAF1_HUMAN
60 PsiBlast_CBE 83.7577%-119 - C2 -3OMV 6.4
63 PsiBlast_CBE 64.9136%-109 - C2 -3P86 5.6 CTR1_ARATH