@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : EF2K_HUMAN: (2013-07-20 )
MADEDLIFRLEGVDGGQSPRAGHDGDSDGDSDDEEGYFICPITDDPSSNQNVNSKVNKYYSNLTKSERYSSSGSPANSFHFKEAWKHAIQKAKHMPDPWAEFHLEDIATERATRHRYNAVTGEWLDDEVLIKMASQPFGRGAMRECFRTKKLSNFLHAQQWKGASNYVAKRYIEPVDRDVYFEDVRLQMEAKLWGEEYNRHKPPKQVDIMQMCIIELKDRPGKPLFHLEHYIEGKYIKYNSNSGFVRDDNIRLTPQAFSHFTFERSGHQLIVVDIQGVGDLYTDPQIHTETGTDFGDGNLGVRGMALFFYSHACNRICESMGLAPFDLSPRERDAVNQNTKLLQSAKTILRGTEEKCGSPQVRTLSGSRPPLLRPLSENSGDENMSDVTFDSLPSSPSSATPHSQKLDHLHWPVFSDLDNMASRDHDHLDNHRESENSGDSGYPSEKRGELDDPEPREHGHSYSNRKYESDEDSLGSSGRVCVEKWNLLNSSRLHLPRASAVALEVQRLNALDLEKKIGKSILGKVHLAMVRYHEGGRFCEKGEEWDQESAVFHLEHAANLGELEAIVGLGLMYSQLPHHILADVSLKETEENKTKGFDYLLKAAEAGDRQSMILVARAFDSGQNLSPDRCQDWLEALHWYNTALEMTDCDEGGEYDGMQDEPRYMMLAREAEMLFTGGYGLEKDPQRSGDLYTQAAEAAMEAMKGRLANQYYQKAEEAWAQMEE

Atome Classification :

(8 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_C_17(3LMI)
MHCKA_DICDI
[Raw transfer]




ATP_D_22(3LMI)

[Raw transfer]




ATP_B_13(3LMI)
MHCKA_DICDI
[Raw transfer]




ATP_A_8(3LMI)
MHCKA_DICDI
[Raw transfer]




ACP_A_4(3LLA)
MHCKA_DICDI
[Raw transfer]




ACP_B_7(3LLA)

[Raw transfer]




ADP_A_6(3PDT)

[Raw transfer]




AMP_A_8(3LKM)

[Raw transfer]




AMP_A_8(3LKM)

[Raw transfer]




23 Fugue 91.6441% -57 - C7 -3LKM 6.1
16 PsiBlast_CBE 89.0436% -57 - C7 -3LLA 7.9
3 PsiBlast_PDB 88.8436% -55 - C7 -3PDT 5.4
18 PsiBlast_CBE 88.4636% -57 - C7 -3LMI 5.3 MHCKA_DICDI
17 PsiBlast_CBE 88.4636% -57 - C7 -3LMI 6.1
2 PsiBlast_PDB 88.3336% -59 - C7 -3LLA 7.9 MHCKA_DICDI
19 PsiBlast_CBE 88.0136% -52 - C7 -3LMI 6.4 MHCKA_DICDI
4 PsiBlast_PDB 87.9836% -56 - C7 -3LMI 7.0 MHCKA_DICDI