@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : FYN_HUMAN: (2013-07-20 )
MGCVQCKDKEATKLTEERDGSLNQSSGYRYGTDPTPQHYPSFGVTSIPNYNNFHAAGGQGLTVFGGVNSSSHTGTLRTRGGTGVTLFVALYDYEARTEDDLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPVDSIQAEEWYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDNGGYYITTRAQFETLQQLVQHYSERAAGLCCRLVVPCHKGMPRLTDLSVKTKDVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATEPQYQPGENL

Atome Classification :

(101 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

VRZ_B_8(3VRZ)
HCK_HUMAN
[Raw transfer]




L1G_A_3(2C0I)
HCK_HUMAN
[Raw transfer]




L3G_A_3(2C0T)
HCK_HUMAN
[Raw transfer]




L2G_A_3(2C0O)
HCK_HUMAN
[Raw transfer]




VSG_A_3(3VS5)
HCK_HUMAN
[Raw transfer]




L3G_B_6(2C0T)
HCK_HUMAN
[Raw transfer]




VRZ_A_5(3VRZ)
HCK_HUMAN
[Raw transfer]




L1G_B_5(2C0I)
HCK_HUMAN
[Raw transfer]




VS0_A_5(3VS0)
HCK_HUMAN
[Raw transfer]




VSA_A_5(3VS1)
HCK_HUMAN
[Raw transfer]




VSA_B_8(3VS1)
HCK_HUMAN
[Raw transfer]




VSF_A_5(3VS4)
HCK_HUMAN
[Raw transfer]




L2G_B_5(2C0O)
HCK_HUMAN
[Raw transfer]




VSF_B_8(3VS4)
HCK_HUMAN
[Raw transfer]




VSB_A_3(3VS2)
HCK_HUMAN
[Raw transfer]




PD3_A_2(3EL7)
SRC_CHICK
[Raw transfer]




G6G_B_5(3G6G)
SRC_CHICK
[Raw transfer]




KS1_B_4(3EN4)
SRC_CHICK
[Raw transfer]




VSB_B_7(3VS2)
HCK_HUMAN
[Raw transfer]




VSG_B_6(3VS5)
HCK_HUMAN
[Raw transfer]




B43_A_3(3VRY)
HCK_HUMAN
[Raw transfer]




VSE_A_3(3VS3)
HCK_HUMAN
[Raw transfer]




VSP_A_3(3SVV)
SRC_CHICK
[Raw transfer]




KS1_B_6(3VS7)
HCK_HUMAN
[Raw transfer]




I76_B_4(4DGG)
SRC_CHICK
[Raw transfer]




VSH_B_10(3VS6)
HCK_HUMAN
[Raw transfer]




BK5_B_4(3UQF)
SRC_CHICK
[Raw transfer]




PD5_A_3(3EL8)
SRC_CHICK
[Raw transfer]




PD5_A_3(3QLF)
SRC_CHICK
[Raw transfer]




VS0_B_8(3VS0)
HCK_HUMAN
[Raw transfer]




VSH_A_6(3VS6)
HCK_HUMAN
[Raw transfer]




VSE_B_7(3VS3)
HCK_HUMAN
[Raw transfer]




KS5_B_3(3EN6)
SRC_CHICK
[Raw transfer]




S03_C_3(1YOL)
SRC_HUMAN
[Raw transfer]




B43_B_7(3VRY)
HCK_HUMAN
[Raw transfer]




BK5_A_3(3UQF)
SRC_CHICK
[Raw transfer]




KS1_A_3(3EN4)
SRC_CHICK
[Raw transfer]




G6G_A_3(3G6G)
SRC_CHICK
[Raw transfer]




I76_A_3(4DGG)
SRC_CHICK
[Raw transfer]




AMP_B_4(3DQX)
SRC_CHICK
[Raw transfer]




PP1_B_2(1QCF)
HCK_HUMAN
[Raw transfer]




KS4_A_3(3EN5)
SRC_CHICK
[Raw transfer]




IHH_C_7(3F6X)
SRC_CHICK
[Raw transfer]




STI_B_6(3OEZ)
SRC_CHICK
[Raw transfer]




B43_A_2(3GEN)

[Raw transfer]




NG7_A_3(4AGW)
SRC_CHICK
[Raw transfer]




AQB_B_4(3TZ7)
SRC_CHICK
[Raw transfer]




08L_A_9(3U4W)
SRC_CHICK
[Raw transfer]




AQM_B_4(3TZ8)
SRC_CHICK
[Raw transfer]




AQU_A_3(3TZ9)
SRC_CHICK
[Raw transfer]




IHH_B_6(3F6X)
SRC_CHICK
[Raw transfer]




AMP_A_3(3DQX)
SRC_CHICK
[Raw transfer]




AQM_A_3(3TZ8)
SRC_CHICK
[Raw transfer]




242_C_3(2OFV)
LCK_HUMAN
[Raw transfer]




ABJ_A_3(3EN7)
SRC_CHICK
[Raw transfer]




1BU_B_4(3F3V)
SRC_CHICK
[Raw transfer]




IHH_D_8(3F6X)
SRC_CHICK
[Raw transfer]




242_D_4(2OFV)
?
[Raw transfer]




NG7_B_6(4AGW)
SRC_CHICK
[Raw transfer]




STI_A_3(3OEZ)
SRC_CHICK
[Raw transfer]




STU_B_3(3D7T)
SRC_CHICK
[Raw transfer]




AM6_A_2(3BYU)
LCK_HUMAN
[Raw transfer]




PP2_B_4(3GEQ)
SRC_CHICK
[Raw transfer]




AQB_A_3(3TZ7)
SRC_CHICK
[Raw transfer]




AQU_B_4(3TZ9)
SRC_CHICK
[Raw transfer]




08X_A_3(3U51)
SRC_CHICK
[Raw transfer]




1BU_B_4(3F3W)
SRC_CHICK
[Raw transfer]




1N1_A_3(3QLG)
SRC_CHICK
[Raw transfer]




9NH_A_2(3B2W)
LCK_HUMAN
[Raw transfer]




1BU_A_3(3F3V)
SRC_CHICK
[Raw transfer]




RBS_A_3(2HWO)
SRC_CHICK
[Raw transfer]




1AW_A_3(3F3U)
SRC_CHICK
[Raw transfer]




1BM_A_2(2HK5)
HCK_HUMAN
[Raw transfer]




1N1_B_4(3QLG)
SRC_CHICK
[Raw transfer]




1BU_A_3(3F3W)
SRC_CHICK
[Raw transfer]




B5A_A_3(3UQG)
SRC_CHICK
[Raw transfer]




4ST_A_2(2J0J)
FAK1_CHICK
[Raw transfer]




P01_B_4(1YOM)
SRC_HUMAN
[Raw transfer]




SR2_A_3(2QLQ)
SRC_CHICK
[Raw transfer]




1N1_B_5(3G5D)
SRC_CHICK
[Raw transfer]




MPZ_G_7(1Y57)
SRC_HUMAN
[Raw transfer]




P01_A_3(1YOM)
SRC_HUMAN
[Raw transfer]




P16_A_3(1OPK)
ABL1_MOUSE
[Raw transfer]




V4Z_A_4(4AOJ)
NTRK1_HUMAN
[Raw transfer]




STU_X_2(3A4O)
LYN_HUMAN
[Raw transfer]




STI_A_2(2PL0)
LCK_HUMAN
[Raw transfer]




08X_B_4(3U51)
SRC_CHICK
[Raw transfer]




1AU_A_3(3F3T)
SRC_CHICK
[Raw transfer]




0UL_B_4(4FIC)
SRC_CHICK
[Raw transfer]




B5A_B_4(3UQG)
SRC_CHICK
[Raw transfer]




1AW_B_5(3F3U)
SRC_CHICK
[Raw transfer]




RBS_B_4(2HWO)
SRC_CHICK
[Raw transfer]




0UL_A_3(4FIC)
SRC_CHICK
[Raw transfer]




SR2_B_5(2QLQ)
SRC_CHICK
[Raw transfer]




24A_C_3(2BDF)
SRC_HUMAN
[Raw transfer]




24A_D_4(2BDF)
SRC_HUMAN
[Raw transfer]




HET_B_2(2BDJ)
SRC_HUMAN
[Raw transfer]




DJK_B_4(2HWP)
SRC_CHICK
[Raw transfer]




1HX_A_3(4ITJ)
RIPK1_HUMAN
[Raw transfer]




MES_A_4(4AGW)
SRC_CHICK
[Raw transfer]




MES_B_7(4AGW)
SRC_CHICK
[Raw transfer]




1 PsiBlast_PDB 90.9477%-107 - C4 -1Y57 7.2 SRC_HUMAN
46 PsiBlast_CBE 87.4864%-104 - C4 -1QCF 6.6 HCK_HUMAN
26 PsiBlast_CBE 85.8764%-107 - C4 -3VS4 8.7 HCK_HUMAN
44 PsiBlast_CBE 85.8364%-109 - C4 -2C0I 11.1 HCK_HUMAN
37 PsiBlast_CBE 85.7164%-109 - C4 -3VRZ 8.6 HCK_HUMAN
36 PsiBlast_CBE 85.4564%-111 - C4 -3VRZ 9.7 HCK_HUMAN
40 PsiBlast_CBE 85.4364%-108 - C4 -2C0T 10.2 HCK_HUMAN
38 PsiBlast_CBE 85.4164%-111 - C4 -3VRY 8.8 HCK_HUMAN
45 PsiBlast_CBE 85.0964%-109 - C4 -2C0I 11.5 HCK_HUMAN
25 PsiBlast_CBE 85.0664%-113 - C4 -3VS5 8.5 HCK_HUMAN
41 PsiBlast_CBE 84.9664%-108 - C4 -2C0T 11.3 HCK_HUMAN
24 PsiBlast_CBE 84.9164%-111 - C4 -3VS5 8.5 HCK_HUMAN
22 PsiBlast_CBE 84.8564%-108 - C4 -3VS6 8.1 HCK_HUMAN
42 PsiBlast_CBE 84.6664%-110 - C4 -2C0O 10.6 HCK_HUMAN
33 PsiBlast_CBE 84.6164%-105 - C4 -3VS1 8.9 HCK_HUMAN
29 PsiBlast_CBE 84.5564%-107 - C4 -3VS3 9.1 HCK_HUMAN
30 PsiBlast_CBE 84.5364%-109 - C4 -3VS2 8.6 HCK_HUMAN
43 PsiBlast_CBE 84.4364%-109 - C4 -2C0O 10.7 HCK_HUMAN
27 PsiBlast_CBE 84.3164%-109 - C4 -3VS4 8.6 HCK_HUMAN
34 PsiBlast_CBE 84.2764%-109 - C4 -3VS0 8.4 HCK_HUMAN
31 PsiBlast_CBE 84.2064%-112 - C4 -3VS2 8.9 HCK_HUMAN
35 PsiBlast_CBE 83.9864%-109 - C4 -3VS0 9.0 HCK_HUMAN
23 PsiBlast_CBE 83.2664%-108 - C4 -3VS6 8.3 HCK_HUMAN
39 PsiBlast_CBE 83.1264%-108 - C4 -3VRY 8.9 HCK_HUMAN
21 PsiBlast_CBE 82.8364%-107 - C4 -3VS7 6.7 HCK_HUMAN
28 PsiBlast_CBE 82.1764%-109 - C4 -3VS3 9.4 HCK_HUMAN
32 PsiBlast_CBE 82.1064%-111 - C4 -3VS1 9.2 HCK_HUMAN
114 HHSearch 76.3844% -99 - C4 -1OPK 10.3 ABL1_MOUSE
12 PsiBlast_PDB 76.3284%-117 - C4 -3G6G 12.3 SRC_CHICK
14 PsiBlast_PDB 76.0684%-120 - C4 -3UQF 7.1 SRC_CHICK
6 PsiBlast_PDB 75.9984%-119 - C4 -3EN4 6.6 SRC_CHICK
62 PsiBlast_CBE 75.8783%-119 - C4 -3QLG 8.1 SRC_CHICK
20 PsiBlast_PDB 75.6383%-117 - C4 -3OEZ 10.0 SRC_CHICK
91 PsiBlast_CBE 75.5984%-120 - C4 -3U4W 10.9 SRC_CHICK
60 PsiBlast_CBE 75.5283%-118 - C4 -1YOL - SRC_HUMAN
85 PsiBlast_CBE 75.0683%-119 - C4 -3SVV 5.7 SRC_CHICK
57 PsiBlast_CBE 74.7984%-121 - C4 -3EN4 6.9 SRC_CHICK
92 PsiBlast_CBE 74.7783%-118 - C4 -3F3W 11.1 SRC_CHICK
79 PsiBlast_CBE 74.7283%-120 - C4 -3F3T 8.0 SRC_CHICK
19 PsiBlast_PDB 74.7083%-119 - C4 -1YOL 3.9 SRC_HUMAN
55 PsiBlast_CBE 74.5784%-118 - C4 -3F6X 7.0 SRC_CHICK
84 PsiBlast_CBE 74.4683%-125 - C4 -2HWO 4.7 SRC_CHICK
93 PsiBlast_CBE 74.3583%-116 - C4 -3F3W 10.6 SRC_CHICK
74 PsiBlast_CBE 74.3383%-125 - C4 -3G5D 7.6 SRC_CHICK
16 PsiBlast_PDB 74.2784%-117 - C4 -4DGG 8.9 SRC_CHICK
61 PsiBlast_CBE 74.1883%-121 - C4 -3QLG 8.2 SRC_CHICK
15 PsiBlast_PDB 73.8684%-118 - C4 -3UQG 4.1 SRC_CHICK
71 PsiBlast_CBE 73.8283%-118 - C4 -3TZ8 10.8 SRC_CHICK
73 PsiBlast_CBE 73.7583%-115 - C4 -3TZ7 9.4 SRC_CHICK
78 PsiBlast_CBE 73.6283%-114 - C4 -3F3U 7.3 SRC_CHICK
69 PsiBlast_CBE 73.5983%-118 - C4 -3TZ9 10.2 SRC_CHICK
13 PsiBlast_PDB 73.5784%-119 - C4 -4AGW 9.6 SRC_CHICK
7 PsiBlast_PDB 73.5584%-123 - C4 -3EN5 6.1 SRC_CHICK
49 PsiBlast_CBE 73.4884%-116 - C4 -4AGW 10.5 SRC_CHICK
72 PsiBlast_CBE 73.4483%-117 - C4 -3TZ7 9.8 SRC_CHICK
51 PsiBlast_CBE 73.4284%-117 - C4 -3UQF 7.6 SRC_CHICK
52 PsiBlast_CBE 73.3084%-116 - C4 -3G6G 13.0 SRC_CHICK
58 PsiBlast_CBE 73.2584%-119 - C4 -3DQX 4.3 SRC_CHICK
53 PsiBlast_CBE 73.1484%-115 - C4 -3F6X 7.1 SRC_CHICK
83 PsiBlast_CBE 73.0683%-119 - C4 -2HWO 3.2 SRC_CHICK
56 PsiBlast_CBE 73.0584%-132 - C4 -3EN6 6.1 SRC_CHICK
70 PsiBlast_CBE 72.9383%-115 - C4 -3TZ8 11.6 SRC_CHICK
81 PsiBlast_CBE 72.8283%-128 - C4 -2QLQ 6.4 SRC_CHICK
65 PsiBlast_CBE 72.8183%-120 - C4 -2BDJ 9.1 SRC_HUMAN
86 PsiBlast_CBE 72.7283%-115 - C4 -3GEQ 6.5 SRC_CHICK
48 PsiBlast_CBE 72.6384%-118 - C4 -4DGG 9.9 SRC_CHICK
64 PsiBlast_CBE 72.5983%-115 - C4 -3OEZ 9.2 SRC_CHICK
5 PsiBlast_PDB 72.5684%-120 - C4 -3DQX 4.3 SRC_CHICK
90 PsiBlast_CBE 72.4184%-116 - C4 -3U51 8.9 SRC_CHICK
50 PsiBlast_CBE 72.3684%-121 - C4 -3UQG 4.2 SRC_CHICK
89 PsiBlast_CBE 72.3584%-115 - C4 -3U51 8.7 SRC_CHICK
67 PsiBlast_CBE 72.2783%-120 - C4 -2BDF 6.9 SRC_HUMAN
9 PsiBlast_PDB 72.2584%-127 - C4 -3EN7 5.5 SRC_CHICK
54 PsiBlast_CBE 72.0384%-119 - C4 -3F6X 7.3 SRC_CHICK
66 PsiBlast_CBE 72.0083%-119 - C4 -2BDF 7.0 SRC_HUMAN
47 PsiBlast_CBE 71.9484%-120 - C4 -4FIC 5.2 SRC_CHICK
76 PsiBlast_CBE 71.9083%-116 - C4 -3F3V 10.6 SRC_CHICK
75 PsiBlast_CBE 71.8983%-115 - C4 -3F3V 10.5 SRC_CHICK
68 PsiBlast_CBE 71.8483%-115 - C4 -3TZ9 9.3 SRC_CHICK
17 PsiBlast_PDB 71.7384%-122 - C4 -4FIC 5.3 SRC_CHICK
10 PsiBlast_PDB 71.5784%-116 - C4 -3EL7 10.0 SRC_CHICK
82 PsiBlast_CBE 71.5183%-123 - C4 -2HWP 2.8 SRC_CHICK
11 PsiBlast_PDB 71.4684%-117 - C4 -3EL8 8.1 SRC_CHICK
4 PsiBlast_PDB 71.1184%-117 - C4 -3D7T 8.4 SRC_CHICK
87 PsiBlast_CBE 71.0383%-119 - C4 -1YOM 6.9 SRC_HUMAN
88 PsiBlast_CBE 70.9583%-115 - C4 -1YOM 6.9 SRC_HUMAN
80 PsiBlast_CBE 70.4683%-121 - C4 -2QLQ 2.6 SRC_CHICK
63 PsiBlast_CBE 69.3683%-121 - C4 -3QLF 7.8 SRC_CHICK
77 PsiBlast_CBE 69.2583%-114 - C4 -3F3U 6.3 SRC_CHICK
96 PsiBlast_CBE 68.0170%-122 - C4 -2HK5 9.3 HCK_HUMAN
94 PsiBlast_CBE 67.5469%-110 - C4 -2PL0 10.4 LCK_HUMAN
97 PsiBlast_CBE 67.4269%-121 - C4 -3B2W 11.2 LCK_HUMAN
99 PsiBlast_CBE 67.0369%-119 - C4 -2OFV 10.6 LCK_HUMAN
100 PsiBlast_CBE 65.2269%-118 - C4 -3BYU 11.0 LCK_HUMAN
98 PsiBlast_CBE 63.1969%-115 - C4 -2OFV 10.6 ?
122 HHSearch 61.5237%-106 * C4 *4AOJ 7.6 NTRK1_HUMAN
134 HHSearch 61.1741%-116 - C4 -3GEN 8.6
95 PsiBlast_CBE 61.0269%-106 - C4 -3A4O 7.8 LYN_HUMAN
129 HHSearch 60.3439%-109 - C4 -2J0J 5.6 FAK1_CHICK
132 HHSearch 56.9241%-100 - C4 -3L9P -
126 HHSearch 46.2831%-112 - C4 -4ITJ 5.8 RIPK1_HUMAN


Add PDB User Result:

(79 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

VRZ_B_8(3VRZ)
HCK_HUMAN
[Raw transfer]




L1G_A_3(2C0I)
HCK_HUMAN
[Raw transfer]




L3G_A_3(2C0T)
HCK_HUMAN
[Raw transfer]




L2G_A_3(2C0O)
HCK_HUMAN
[Raw transfer]




VSG_A_3(3VS5)
HCK_HUMAN
[Raw transfer]




L3G_B_6(2C0T)
HCK_HUMAN
[Raw transfer]




VRZ_A_5(3VRZ)
HCK_HUMAN
[Raw transfer]




L1G_B_5(2C0I)
HCK_HUMAN
[Raw transfer]




VS0_A_5(3VS0)
HCK_HUMAN
[Raw transfer]




VSA_A_5(3VS1)
HCK_HUMAN
[Raw transfer]




VSA_B_8(3VS1)
HCK_HUMAN
[Raw transfer]




VSF_A_5(3VS4)
HCK_HUMAN
[Raw transfer]




L2G_B_5(2C0O)
HCK_HUMAN
[Raw transfer]




VSF_B_8(3VS4)
HCK_HUMAN
[Raw transfer]




VSB_A_3(3VS2)
HCK_HUMAN
[Raw transfer]




PD3_A_2(3EL7)
SRC_CHICK
[Raw transfer]




G6G_B_5(3G6G)
SRC_CHICK
[Raw transfer]




KS1_B_4(3EN4)
SRC_CHICK
[Raw transfer]




VSB_B_7(3VS2)
HCK_HUMAN
[Raw transfer]




VSG_B_6(3VS5)
HCK_HUMAN
[Raw transfer]




B43_A_3(3VRY)
HCK_HUMAN
[Raw transfer]




VSE_A_3(3VS3)
HCK_HUMAN
[Raw transfer]




VSP_A_3(3SVV)
SRC_CHICK
[Raw transfer]




KS1_B_6(3VS7)
HCK_HUMAN
[Raw transfer]




I76_B_4(4DGG)
SRC_CHICK
[Raw transfer]




VSH_B_10(3VS6)
HCK_HUMAN
[Raw transfer]




BK5_B_4(3UQF)
SRC_CHICK
[Raw transfer]




PD5_A_3(3EL8)
SRC_CHICK
[Raw transfer]




PD5_A_3(3QLF)
SRC_CHICK
[Raw transfer]




VS0_B_8(3VS0)
HCK_HUMAN
[Raw transfer]




VSH_A_6(3VS6)
HCK_HUMAN
[Raw transfer]




VSE_B_7(3VS3)
HCK_HUMAN
[Raw transfer]




KS5_B_3(3EN6)
SRC_CHICK
[Raw transfer]




S03_C_3(1YOL)
SRC_HUMAN
[Raw transfer]




B43_B_7(3VRY)
HCK_HUMAN
[Raw transfer]




BK5_A_3(3UQF)
SRC_CHICK
[Raw transfer]




KS1_A_3(3EN4)
SRC_CHICK
[Raw transfer]




G6G_A_3(3G6G)
SRC_CHICK
[Raw transfer]




I76_A_3(4DGG)
SRC_CHICK
[Raw transfer]




AMP_B_4(3DQX)
SRC_CHICK
[Raw transfer]




PP1_B_2(1QCF)
HCK_HUMAN
[Raw transfer]




KS4_A_3(3EN5)
SRC_CHICK
[Raw transfer]




IHH_C_7(3F6X)
SRC_CHICK
[Raw transfer]




STI_B_6(3OEZ)
SRC_CHICK
[Raw transfer]




B43_A_2(3GEN)

[Raw transfer]




NG7_A_3(4AGW)
SRC_CHICK
[Raw transfer]




AQB_B_4(3TZ7)
SRC_CHICK
[Raw transfer]




08L_A_9(