@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : IKKA_HUMAN: (2013-07-21 )
MERPPGLRPGAGGPWEMRERLGTGGFGNVCLYQHRELDLKIAIKSCRLELSTKNRERWCHEIQIMKKLNHANVVKACDVPEELNILIHDVPLLAMEYCSGGDLRKLLNKPENCCGLKESQILSLLSDIGSGIRYLHENKIIHRDLKPENIVLQDVGGKIIHKIIDLGYAKDVDQGSLCTSFVGTLQYLAPELFENKPYTATVDYWSFGTMVFECIAGYRPFLHHLQPFTWHEKIKKKDPKCIFACEEMSGEVRFSSHLPQPNSLCSLVVEPMENWLQLMLNWDPQQRGGPVDLTLKQPRCFVLMDHILNLKIVHILNMTSAKIISFLLPPDESLHSLQSRIERETGINTGSQELLSETGISLDPRKPASQCVLDGVRGCDSYMVYLFDKSKTVYEGPFASRSLSDCVNYIVQDSKIQLPIIQLRKVWAEAVHYVSGLKEDYSRLFQGQRAAMLSLLRYNANLTKMKNTLISASQQLKAKLEFFHKSIQLDLERYSEQMTYGISSEKMLKAWKEMEEKAIHYAEVGVIGYLEDQIMSLHAEIMELQKSPYGRRQGDLMESLEQRAIDLYKQLKHRPSDHSYSDSTEMVKIIVHTVQSQDRVLKELFGHLSKLLGCKQKIIDLLPKVEVALSNIKEADNTVMFMQGKRQKEIWHLLKIACTQSSARSLVGSSLEGAVTPQTSAWLPPTSAEHDHSLSCVVTPQDGETSAQMIEENLNCLGHLSTIIHEANEEQGNSMMNLDWSWLTE

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_3(4GV1)
AKT1_HUMAN
[Raw transfer]




ADP_A_6(2CN5)
CHK2_HUMAN
[Raw transfer]




ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




WTI_A_2(2WTI)
CHK2_HUMAN
[Raw transfer]




GOL_A_6(4GV1)
AKT1_HUMAN
[Raw transfer]




ZZK_A_2(2WTD)
CHK2_HUMAN
[Raw transfer]




P3J_A_2(4BDG)
?
[Raw transfer]




ATP_B_4(4FG9)
KCC1A_HUMAN
[Raw transfer]




WTJ_A_2(2WTJ)
CHK2_HUMAN
[Raw transfer]




A9T_A_2(4A9T)
CHK2_HUMAN
[Raw transfer]




LWH_A_2(2XM9)
CHK2_HUMAN
[Raw transfer]




H3R_A_2(4BDF)
?
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




DBQ_A_4(2CN8)
CHK2_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




AMP_B_13(3NYO)
GRK6_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ANP_B_8(2ACX)
GRK6_HUMAN
[Raw transfer]




ANP_A_7(2ACX)
GRK6_HUMAN
[Raw transfer]




IQU_D_8(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_B_6(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_A_5(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_C_7(2CKE)
DAPK2_HUMAN
[Raw transfer]




QPP_C_4(2JC6)
KCC1D_HUMAN
[Raw transfer]




EDO_A_5(4BDK)
?
[Raw transfer]




110 HHSearch 51.4432% -75 - C1 -4GV1 2.9 AKT1_HUMAN
106 HHSearch 50.6630% -80 - C1 -4FG7 4.2 KCC1A_HUMAN
86 PsiBlast_CBE 47.9133% -77 - C1 -2ACX 4.5 GRK6_HUMAN
87 PsiBlast_CBE 47.3233% -73 - C1 -2ACX 4.6 GRK6_HUMAN
41 PsiBlast_CBE 43.8733% -82 - C1 -2CKE 4.2 DAPK2_HUMAN
40 PsiBlast_CBE 43.1233% -75 - C1 -2CKE 3.9 DAPK2_HUMAN
42 PsiBlast_CBE 42.4733% -77 - C1 -2CKE 4.0 DAPK2_HUMAN
39 PsiBlast_CBE 42.4133% -77 - C1 -2CKE 4.0 DAPK2_HUMAN
72 PsiBlast_CBE 37.9933% -88 - C1 -4FG8 4.4 KCC1A_HUMAN
24 PsiBlast_CBE 37.1433% -91 - C1 -2JC6 5.3 KCC1D_HUMAN
73 PsiBlast_CBE 37.0733% -93 - C1 -4FG8 5.6 KCC1A_HUMAN
56 PsiBlast_CBE 36.7333% -77 - C1 -4BDK 2.7 ?
67 PsiBlast_CBE 36.6333% -74 - C1 -2WTD 5.0 CHK2_HUMAN
76 PsiBlast_CBE 36.6133% -91 - C1 -4FG9 5.5 KCC1A_HUMAN
64 PsiBlast_CBE 36.5033% -66 - C1 -2XM9 7.8 CHK2_HUMAN
59 PsiBlast_CBE 36.4733% -74 - C1 -4BDF 4.5 ?
58 PsiBlast_CBE 36.2233% -76 - C1 -4BDG 3.6 ?
75 PsiBlast_CBE 35.6533% -90 - C1 -4FG9 5.3 KCC1A_HUMAN
70 PsiBlast_CBE 35.0233% -71 - C1 -2CN5 6.7 CHK2_HUMAN
66 PsiBlast_CBE 34.9633% -70 - C1 -2WTI 5.5 CHK2_HUMAN
63 PsiBlast_CBE 34.8933% -67 - C1 -4A9T 5.1 CHK2_HUMAN
65 PsiBlast_CBE 34.3333% -73 - C1 -2WTJ 3.0 CHK2_HUMAN
69 PsiBlast_CBE 34.2133% -71 - C1 -2CN8 3.1 CHK2_HUMAN
88 PsiBlast_CBE 12.5233% 27 - C1 -3NYO 2.9 GRK6_HUMAN