@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : IKKE_HUMAN: (2013-07-21 )
MQSTANYLWHTDDLLGQGATASVYKARNKKSGELVAVKVFNTTSYLRPREVQVREFEVLRKLNHQNIVKLFAVEETGGSRQKVLVMEYCSSGSLLSVLESPENAFGLPEDEFLVVLRCVVAGMNHLRENGIVHRDIKPGNIMRLVGEEGQSIYKLTDFGAARELDDDEKFVSVYGTEEYLHPDMYERAVLRKPQQKAFGVTVDLWSIGVTLYHAATGSLPFIPFGGPRRNKEIMYRITTEKPAGAIAGAQRRENGPLEWSYTLPITCQLSLGLQSQLVPILANILEVEQAKCWGFDQFFAETSDILQRVVVHVFSLSQAVLHHIYIHAHNTIAIFQEAVHKQTSVAPRHQEYLFEGHLCVLEPSVSAQHIAHTTASSPLTLFSTAIPKGLAFRDPALDVPKFVPKVDLQADYNTAKGVLGAGYQALRLARALLDGQELMFRGLHWVMEVLQATCRRTLEVARTSLLYLSSSLGTERFSSVAGTPEIQELKAAAELRSRLRTLAEVLSRCSQNITETQESLSSLNRELVKSRDQVHEDRSIQQIQCCLDKMNFIYKQFKKSRMRPGLGYNEEQIHKLDKVNFSHLAKRLLQVFQEECVQKYQASLVTHGKRMRVVHETRNHLRLVGCSVAACNTEAQGVQESLSKLLEELSHQLLQDRAKGAQASPPPIAPYPSPTRKDLLLHMQELCEGMKLLASDLLDNNRIIERLNRVPAPPDV

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_2(3G51)
KS6A3_MOUSE
[Raw transfer]




ATP_B_6(2YAA)
DAPK2_MOUSE
[Raw transfer]




ATP_A_4(1PHK)
PHKG1_RABIT
[Raw transfer]




1H4_A_2(4IWO)
TBK1_HUMAN
[Raw transfer]




38R_A_2(3ZDU)
CDKL3_HUMAN
[Raw transfer]




GVD_A_9(2UV2)
SLK_HUMAN
[Raw transfer]




BX7_A_2(4JL9)
?
[Raw transfer]




1FV_A_2(4IWQ)
TBK1_HUMAN
[Raw transfer]




ATP_A_3(2YAA)
DAPK2_MOUSE
[Raw transfer]




BX7_A_2(4IW0)
TBK1_HUMAN
[Raw transfer]




STU_A_2(3A61)
KS6B1_HUMAN
[Raw transfer]




BX7_A_2(4IWP)
TBK1_HUMAN
[Raw transfer]




STU_B_4(3A60)
KS6B1_HUMAN
[Raw transfer]




BX7_A_2(4IM3)
TBK1_HUMAN
[Raw transfer]




BX7_A_3(4EUU)
TBK1_HUMAN
[Raw transfer]




STU_A_3(3A60)
KS6B1_HUMAN
[Raw transfer]




ACP_A_3(2Z7Q)
KS6A1_HUMAN
[Raw transfer]




BX7_A_3(4EUT)
TBK1_HUMAN
[Raw transfer]




BX7_B_5(4EUT)
TBK1_HUMAN
[Raw transfer]




SU6_A_2(4JLC)
?
[Raw transfer]




IQU_B_6(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_D_8(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_C_7(2CKE)
DAPK2_HUMAN
[Raw transfer]




IQU_A_5(2CKE)
DAPK2_HUMAN
[Raw transfer]




DKI_A_13(2J51)
SLK_HUMAN
[Raw transfer]




GOL_A_6(4GV1)
AKT1_HUMAN
[Raw transfer]




EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




5 PsiBlast_PDB 94.8050% -98 - C2 -4IW0 7.3 TBK1_HUMAN
4 PsiBlast_PDB 92.6650%-100 - C2 -4IWO 7.7 TBK1_HUMAN
1 PsiBlast_PDB 92.4650%-103 - C2 -4IM3 7.6 TBK1_HUMAN
3 PsiBlast_PDB 90.6150% -98 - C2 -4IWQ 7.4 TBK1_HUMAN
6 PsiBlast_PDB 90.0452% -98 - C2 -4JL9 8.6 ?
2 PsiBlast_PDB 89.7350% -94 - C2 -4IWP 7.5 TBK1_HUMAN
7 PsiBlast_PDB 88.3552%-101 - C2 -4JLC 6.3 ?
21 PsiBlast_CBE 73.0567%-108 - C2 -4EUT 6.9 TBK1_HUMAN
77 HHSearch 71.0967%-102 - C2 -4EUT 6.9 TBK1_HUMAN
9 PsiBlast_PDB 69.6572% -92 - C2 -4EUU 7.8 TBK1_HUMAN
22 PsiBlast_CBE 46.2772% -56 - C2 -4EUU - TBK1_HUMAN
27 PsiBlast_CBE 39.0532% -74 - C2 -2YAA 5.8 DAPK2_MOUSE
32 PsiBlast_CBE 37.9432% -74 - C2 -2CKE 3.8 DAPK2_HUMAN
28 PsiBlast_CBE 37.6932% -72 - C2 -2YAA 4.8 DAPK2_MOUSE
63 PsiBlast_CBE 37.0133% -67 - C2 -2WEL 3.4 KCC2D_HUMAN
31 PsiBlast_CBE 36.6232% -70 - C2 -2CKE 3.9 DAPK2_HUMAN
30 PsiBlast_CBE 36.2432% -72 - C2 -2CKE 4.0 DAPK2_HUMAN
33 PsiBlast_CBE 35.9632% -70 - C2 -2CKE 3.9 DAPK2_HUMAN
50 PsiBlast_CBE 34.4432% -69 - C2 -1PHK 5.9 PHKG1_RABIT
57 PsiBlast_CBE 33.7732% -69 - C2 -3A61 7.1 KS6B1_HUMAN
59 PsiBlast_CBE 33.0032% -64 - C2 -3A60 8.0 KS6B1_HUMAN
40 PsiBlast_CBE 31.0535% -70 - C2 -2Z7Q 4.8 KS6A1_HUMAN
47 PsiBlast_CBE 30.5035% -66 - C2 -3G51 7.6 KS6A3_MOUSE
48 PsiBlast_CBE 25.4931% -60 - C2 -3ZDU 7.3 CDKL3_HUMAN
24 PsiBlast_CBE 25.3033% -60 - C2 -2JAM 1.9 KCC1G_HUMAN
16 PsiBlast_PDB 23.9233% -60 - C2 -2JAM 2.0 KCC1G_HUMAN
58 PsiBlast_CBE 23.7832% -49 - C2 -3A60 8.6 KS6B1_HUMAN
46 PsiBlast_CBE 17.0631% -45 - C2 -2J51 6.6 SLK_HUMAN
45 PsiBlast_CBE 15.3831% -44 - C2 -2UV2 6.6 SLK_HUMAN