@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : IRAK1_HUMAN: (2013-07-21 )
MAGGPGPGEPAAPGAQHFLYEVPPWVMCRFYKVMDALEPADWCQFAALIVRDQTELRLCERSGQRTASVLWPWINRNARVADLVHILTHLQLLRARDIITAWHPPAPLPSPGTTAPRPSSIPAPAEAEAWSPRKLPSSASTFLSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSSTKPGPESSVSLLQGARPFPFCWPLCEISRGTHNFSEELKIGEGGFGCVYRAVMRNTVYAVKRLKENADLEWTAVKQSFLTEVEQLSRFRHPNIVDFAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDSPSLIHGDIKSSNVLLDERLTPKLGDFGLARFSRFAGSSPSQSSMVARTQTVRGTLAYLPEEYIKTGRLAVDTDTFSFGVVVLETLAGQRAVKTHGARTKYLKDLVEEEAEEAGVALRSTQSTLQAGLAADAWAAPIAMQIYKKHLDPRPGPCPPELGLGLGQLACCCLHRRAKRRPPMTQVYERLEKLQAVVAGVPGHSEAASCIPPSPQENSYVSSTGRAHSGAAPWQPLAAPSGASAQAAEQLQRGPNQPVESDESLGGLSAALRSWHLTPSCPLDPAPLREAGCPQGDTAGESSWGSGPGSRPTAVEGLALGSSASSSSEPPQIIINPARQKMVQKLALYEDGALDSLQLLSSSSLPGLGLEQDRQGPEESDEFQS

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RI9_A_3(4EHG)
BRAF_HUMAN
[Raw transfer]



BR2_A_3(3SKC)
BRAF_HUMAN
[Raw transfer]



T1Q_B_4(4E4X)

[Raw transfer]



ATG_A_10(4DN5)
M3K14_HUMAN
[Raw transfer]



SM5_B_4(3D4Q)

[Raw transfer]



SM5_A_3(3D4Q)
BRAF_HUMAN
[Raw transfer]



032_A_3(3OG7)
BRAF_HUMAN
[Raw transfer]



ANP_A_2(3UIM)
BAK1_ARATH
[Raw transfer]



325_A_3(4FK3)
BRAF_HUMAN
[Raw transfer]



ANP_A_2(3UIM)

[Raw transfer]



FNI_A_3(3PPK)
BRAF_HUMAN
[Raw transfer]



B0R_A_3(3TV6)
BRAF_HUMAN
[Raw transfer]



RI9_B_4(4EHG)

[Raw transfer]



FNI_B_4(3PPK)

[Raw transfer]



BR2_B_4(3SKC)

[Raw transfer]



RI8_A_3(4EHE)
BRAF_HUMAN
[Raw transfer]



324_A_3(3C4C)
BRAF_HUMAN
[Raw transfer]



SM6_A_3(3PSB)
BRAF_HUMAN
[Raw transfer]



L1E_B_3(3IDP)

[Raw transfer]



L1E_A_4(3IDP)
BRAF_HUMAN
[Raw transfer]



FOI_B_4(3PPJ)

[Raw transfer]



TV4_B_4(3TV4)

[Raw transfer]



FOI_A_3(3PPJ)
BRAF_HUMAN
[Raw transfer]



T1Q_A_3(4E4X)
BRAF_HUMAN
[Raw transfer]



T12_C_9(2NRU)
IRAK4_HUMAN
[Raw transfer]



T12_A_7(2NRU)
IRAK4_HUMAN
[Raw transfer]



T12_A_7(2NRU)
IRAK4_HUMAN
[Raw transfer]



FP4_A_3(3PRI)
BRAF_HUMAN
[Raw transfer]



RI8_B_4(4EHE)

[Raw transfer]



B1E_B_4(4G9R)

[Raw transfer]



B96_A_6(4JVG)
?
[Raw transfer]



FP4_B_4(3PRI)

[Raw transfer]



B0R_B_4(3TV6)

[Raw transfer]



SM6_B_4(3PSB)

[Raw transfer]



STU_E_5(2OIC)
IRAK4_HUMAN
[Raw transfer]



STU_A_3(3PPZ)
CTR1_ARATH
[Raw transfer]



T12_D_10(2NRU)
IRAK4_HUMAN
[Raw transfer]



T12_B_8(2NRU)
IRAK4_HUMAN
[Raw transfer]



B96_C_7(4JVG)
?
[Raw transfer]



ADP_A_6(3C4Z)
RK_BOVIN
[Raw transfer]



STU_A_8(2NRY)
IRAK4_HUMAN
[Raw transfer]



STU_A_3(3P86)
CTR1_ARATH
[Raw transfer]



FP3_A_3(3PRF)
BRAF_HUMAN
[Raw transfer]



BAX_A_3(1UWH)
BRAF_HUMAN
[Raw transfer]



FP3_B_4(3PRF)

[Raw transfer]



SM5_A_3(3OMV)
RAF1_HUMAN
[Raw transfer]



BAX_A_3(1UWJ)
BRAF_HUMAN
[Raw transfer]



831_B_6(3II5)

[Raw transfer]
104 HHSearch 88.7438% -90 - C2 -2NRU 6.1 IRAK4_HUMAN
109 HHSearch 85.2336% -89 - C2 -3UIM 4.3 BAK1_ARATH
4 PsiBlast_PDB 82.0534% -93 - C2 -2OIC 8.6 IRAK4_HUMAN
1 PsiBlast_PDB 80.9234% -92 - C2 -2NRY 9.1 IRAK4_HUMAN
22 PsiBlast_CBE 63.5933% -55 - C2 -2NRU 5.1 IRAK4_HUMAN
21 PsiBlast_CBE 63.2133% -53 - C2 -2NRU 5.9 IRAK4_HUMAN
23 PsiBlast_CBE 63.0233% -54 - C2 -2NRU 6.0 IRAK4_HUMAN
11 PsiBlast_PDB 51.1533% -85 - C2 -3PPZ 8.3 CTR1_ARATH
12 PsiBlast_PDB 49.5733% -87 - C2 -3P86 8.3 CTR1_ARATH
50 PsiBlast_CBE 44.1732% -82 - C2 -3PPK 6.7 BRAF_HUMAN
16 PsiBlast_PDB 42.3432% -75 - C2 -4FK3 5.4 BRAF_HUMAN
19 PsiBlast_PDB 42.1532% -72 - C2 -3PSB 5.6 BRAF_HUMAN
30 PsiBlast_CBE 42.1432% -77 - C2 -4EHE 4.2
20 PsiBlast_PDB 41.7132% -75 - C2 -3PPJ 5.3 BRAF_HUMAN
52 PsiBlast_CBE 41.5832% -75 - C2 -3D4Q 5.4
18 PsiBlast_PDB 41.5232% -76 - C2 -3D4Q 5.6 BRAF_HUMAN
49 PsiBlast_CBE 41.4832% -76 - C2 -3PPK 6.3
38 PsiBlast_CBE 41.3532% -76 - C2 -3TV4 3.9
48 PsiBlast_CBE 41.1432% -79 - C2 -3PRF 6.1 BRAF_HUMAN
51 PsiBlast_CBE 41.0632% -75 - C2 -3PPJ 5.0
57 PsiBlast_CBE 40.4832% -73 - C2 -3OG7 7.0 BRAF_HUMAN
47 PsiBlast_CBE 40.3632% -71 - C2 -3PRF 5.1
32 PsiBlast_CBE 40.3532% -71 - C2 -4E4X 6.3
37 PsiBlast_CBE 40.0832% -77 - C2 -3TV6 2.8 BRAF_HUMAN
65 PsiBlast_CBE 39.9432% -74 - C2 -1UWH 8.4 BRAF_HUMAN
33 PsiBlast_CBE 39.8032% -80 - C2 -4E4X 6.4 BRAF_HUMAN
44 PsiBlast_CBE 39.7032% -72 - C2 -3PSB 5.6
36 PsiBlast_CBE 39.6632% -72 - C2 -3TV6 3.4
63 PsiBlast_CBE 39.6432% -69 - C2 -3IDP 8.9 BRAF_HUMAN
60 PsiBlast_CBE 39.4232% -72 - C2 -4EHG 3.7
53 PsiBlast_CBE 39.1632% -68 - C2 -3II5 7.6
61 PsiBlast_CBE 38.7932% -72 - C2 -4EHG 6.4 BRAF_HUMAN
45 PsiBlast_CBE 38.7732% -70 - C2 -3PRI 6.6
26 PsiBlast_CBE 38.5532% -68 - C2 -4JVG 6.3 ?
39 PsiBlast_CBE 38.4032% -71 - C2 -3SKC 5.2
58 PsiBlast_CBE 38.3232% -70 - C2 -4G9R 8.5
56 PsiBlast_CBE 38.0332% -69 - C2 -1UWJ 8.9 BRAF_HUMAN
46 PsiBlast_CBE 38.0032% -70 - C2 -3PRI 6.5 BRAF_HUMAN
31 PsiBlast_CBE 37.4132% -75 - C2 -4EHE 4.4 BRAF_HUMAN
27 PsiBlast_CBE 37.4032% -74 - C2 -4JVG 7.4 ?
62 PsiBlast_CBE 37.3932% -70 - C2 -3IDP 10.1
14 PsiBlast_PDB 36.7332% -64 - C2 -3C4C 5.7 BRAF_HUMAN
40 PsiBlast_CBE 36.7132% -73 - C2 -3SKC 4.6 BRAF_HUMAN