@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : IRAK4_HUMAN: (2013-07-21 )
MNKPITPSTYVRCLNVGLIRKLSDFIDPQEGWKKLAVAIKKPSGDDRYNQFHIRRFEALLQTGKSPTSELLFDWGTTNCTVGDLVDLLIQNEFFAPASLLLPDAVPKTANTLPSKEAITVQQKQMPFCDKDRTLMTPVQNLEQSYMPPDSSSPENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS

Atome Classification :

(57 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

T12_C_9(2NRU)
IRAK4_HUMAN
[Raw transfer]




STU_E_5(2OIC)
IRAK4_HUMAN
[Raw transfer]




IHH_C_7(3F6X)
SRC_CHICK
[Raw transfer]




STU_A_8(2NRY)
IRAK4_HUMAN
[Raw transfer]




T12_D_10(2NRU)
IRAK4_HUMAN
[Raw transfer]




T12_A_7(2NRU)
IRAK4_HUMAN
[Raw transfer]




T12_A_7(2NRU)
IRAK4_HUMAN
[Raw transfer]




G6G_A_3(3G6G)
SRC_CHICK
[Raw transfer]




NG7_A_3(4AGW)
SRC_CHICK
[Raw transfer]




547_B_2(2OF2)
LCK_HUMAN
[Raw transfer]




9NH_A_2(3B2W)
LCK_HUMAN
[Raw transfer]




G6G_B_5(3G6G)
SRC_CHICK
[Raw transfer]




I76_B_4(4DGG)
SRC_CHICK
[Raw transfer]




BK5_A_3(3UQF)
SRC_CHICK
[Raw transfer]




NG7_B_6(4AGW)
SRC_CHICK
[Raw transfer]




T12_B_8(2NRU)
IRAK4_HUMAN
[Raw transfer]




KS1_B_4(3EN4)
SRC_CHICK
[Raw transfer]




I76_A_3(4DGG)
SRC_CHICK
[Raw transfer]




ANP_A_2(3UIM)
BAK1_ARATH
[Raw transfer]




IHH_B_6(3F6X)
SRC_CHICK
[Raw transfer]




STU_A_3(3P86)
CTR1_ARATH
[Raw transfer]




BK5_B_4(3UQF)
SRC_CHICK
[Raw transfer]




ANP_B_2(2SRC)
SRC_HUMAN
[Raw transfer]




IHH_D_8(3F6X)
SRC_CHICK
[Raw transfer]




P01_B_4(1YOM)
SRC_HUMAN
[Raw transfer]




T1Q_B_4(4E4X)

[Raw transfer]




P16_A_3(1OPK)
ABL1_MOUSE
[Raw transfer]




979_B_2(2OF4)
LCK_HUMAN
[Raw transfer]




AM6_A_2(3BYU)
LCK_HUMAN
[Raw transfer]




ANP_A_3(4FIE)
PAK4_HUMAN
[Raw transfer]




08L_A_9(3U4W)
SRC_CHICK
[Raw transfer]




FP4_B_4(3PRI)

[Raw transfer]




242_D_4(2OFV)
?
[Raw transfer]




STU_X_2(3A4O)

[Raw transfer]




STU_B_2(1BYG)
CSK_HUMAN
[Raw transfer]




P01_A_3(1YOM)
SRC_HUMAN
[Raw transfer]




ABJ_A_3(3EN7)
SRC_CHICK
[Raw transfer]




5LK_A_2(3MPM)
LCK_HUMAN
[Raw transfer]




1N8_D_4(2OG8)
?
[Raw transfer]




NBS_B_2(1KSW)
SRC_HUMAN
[Raw transfer]




T1Q_A_3(4E4X)
BRAF_HUMAN
[Raw transfer]




242_C_3(2OFV)
LCK_HUMAN
[Raw transfer]




MPZ_G_7(1Y57)
SRC_HUMAN
[Raw transfer]




SM5_A_3(3OMV)
RAF1_HUMAN
[Raw transfer]




FP4_A_3(3PRI)
BRAF_HUMAN
[Raw transfer]




KS4_A_3(3EN5)
SRC_CHICK
[Raw transfer]




STI_A_2(2PL0)
LCK_HUMAN
[Raw transfer]




B5A_A_3(3UQG)
SRC_CHICK
[Raw transfer]




734_A_3(4E26)
BRAF_HUMAN
[Raw transfer]




RI8_A_3(4EHE)
BRAF_HUMAN
[Raw transfer]




H8H_A_2(2H8H)
SRC_HUMAN
[Raw transfer]




0UL_B_4(4FIC)
SRC_CHICK
[Raw transfer]




0UL_A_3(4FIC)
SRC_CHICK
[Raw transfer]




08X_B_4(3U51)
SRC_CHICK
[Raw transfer]




08X_A_3(3U51)
SRC_CHICK
[Raw transfer]




BAX_A_3(1UWH)
BRAF_HUMAN
[Raw transfer]




RI8_B_4(4EHE)

[Raw transfer]




24A_C_3(2BDF)
SRC_HUMAN
[Raw transfer]




24A_D_4(2BDF)
SRC_HUMAN
[Raw transfer]




HET_B_2(2BDJ)
SRC_HUMAN
[Raw transfer]




EDO_A_3(3MPM)
LCK_HUMAN
[Raw transfer]




4 PsiBlast_PDB 87.6999% -99 - C2 -2OIC 8.4 IRAK4_HUMAN
116 HHSearch 87.09100%-100 - C2 -2NRU 8.2 IRAK4_HUMAN
1 PsiBlast_PDB 86.8099% -95 - C2 -2NRY 9.4 IRAK4_HUMAN
23 PsiBlast_CBE 69.6599% -41 - C2 -2NRU 8.1 IRAK4_HUMAN
21 PsiBlast_CBE 69.2699% -39 - C2 -2NRU 7.2 IRAK4_HUMAN
22 PsiBlast_CBE 69.0999% -39 - C2 -2NRU 8.7 IRAK4_HUMAN
10 PsiBlast_PDB 64.2035% -94 - C2 -3UIM 4.4 BAK1_ARATH
111 HHSearch 57.0931% -77 - C2 -3OMV 4.1 RAF1_HUMAN
83 PsiBlast_CBE 57.0531% -72 - C2 -3U4W 10.4 SRC_CHICK
87 PsiBlast_CBE 56.9931% -77 - C2 -4DGG 6.5 SRC_CHICK
86 PsiBlast_CBE 56.9531% -75 - C2 -4DGG 8.7 SRC_CHICK
82 PsiBlast_CBE 56.5531% -79 - C2 -3U51 8.5 SRC_CHICK
28 PsiBlast_CBE 56.1531% -76 - C2 -4EHE 4.6
102 Fugue 56.0631% -91 - C2 -1BYG 7.4 CSK_HUMAN
65 PsiBlast_CBE 55.7131% -75 - C2 -2OFV 9.1 LCK_HUMAN
81 PsiBlast_CBE 55.5631% -78 - C2 -3U51 8.8 SRC_CHICK
100 PsiBlast_CBE 55.4631% -74 - C2 -3EN4 5.7 SRC_CHICK
89 PsiBlast_CBE 55.4631% -73 - C2 -4AGW 8.0 SRC_CHICK
90 PsiBlast_CBE 55.2931% -77 - C2 -3UQG 4.0 SRC_CHICK
92 PsiBlast_CBE 55.0531% -78 - C2 -3UQF 5.8 SRC_CHICK
71 PsiBlast_CBE 54.7531% -72 - C2 -2H8H 7.5 SRC_HUMAN
30 PsiBlast_CBE 54.7131% -80 - C2 -4E4X 6.4
95 PsiBlast_CBE 54.6731% -73 - C2 -3F6X 6.9 SRC_CHICK
97 PsiBlast_CBE 54.6231% -72 - C2 -3F6X 6.8 SRC_CHICK
93 PsiBlast_CBE 54.6231% -71 - C2 -3G6G 10.4 SRC_CHICK
31 PsiBlast_CBE 54.5631% -83 - C2 -4E4X 5.8 BRAF_HUMAN
85 PsiBlast_CBE 54.5031% -73 - C2 -4FIC 3.3 SRC_CHICK
91 PsiBlast_CBE 54.4931% -71 - C2 -3UQF 6.3 SRC_CHICK
99 PsiBlast_CBE 54.4331% -72 - C2 -3EN5 5.9 SRC_CHICK
74 PsiBlast_CBE 54.3731% -71 - C2 -2BDF 6.9 SRC_HUMAN
67 PsiBlast_CBE 54.3531% -71 - C2 -2OF4 6.1 LCK_HUMAN
72 PsiBlast_CBE 54.2331% -65 * C2 *2BDJ 8.5 SRC_HUMAN
96 PsiBlast_CBE 54.1831% -71 - C2 -3F6X 7.3 SRC_CHICK
73 PsiBlast_CBE 54.1831% -72 - C2 -2BDF 7.0 SRC_HUMAN
66 PsiBlast_CBE 54.1231% -69 - C2 -3BYU 8.0 LCK_HUMAN
88 PsiBlast_CBE 54.0031% -70 - C2 -4AGW 10.2 SRC_CHICK
84 PsiBlast_CBE 53.9531% -73 - C2 -4FIC 5.0 SRC_CHICK
94 PsiBlast_CBE 53.8131% -75 - C2 -3G6G 10.0 SRC_CHICK
98 PsiBlast_CBE 53.6231% -75 - C2 -3EN7 5.1 SRC_CHICK
14 PsiBlast_PDB 53.5831% -69 - C2 -1UWH 7.8 BRAF_HUMAN
63 PsiBlast_CBE 53.5531% -68 - C2 -2PL0 7.0 LCK_HUMAN
68 PsiBlast_CBE 53.5431% -72 - C2 -2OF2 6.7 LCK_HUMAN
77 PsiBlast_CBE 53.4031% -70 - C2 -1Y57 7.1 SRC_HUMAN
76 PsiBlast_CBE 53.3931% -69 - C2 -2SRC 4.6 SRC_HUMAN
44 PsiBlast_CBE 53.2531% -71 - C2 -3PRI 6.6
45 PsiBlast_CBE 53.1731% -70 - C2 -3PRI 6.5 BRAF_HUMAN
64 PsiBlast_CBE 53.0931% -76 - C2 -2OFV 8.8 ?
62 PsiBlast_CBE 52.7431% -66 - C2 -3B2W 9.6 LCK_HUMAN
79 PsiBlast_CBE 52.6332% -69 - C2 -1YOM 5.8 SRC_HUMAN
29 PsiBlast_CBE 52.5631% -74 - C2 -4EHE 3.6 BRAF_HUMAN
70 PsiBlast_CBE 52.4531% -59 - C2 -3MPM 5.0 LCK_HUMAN
78 PsiBlast_CBE 52.4131% -66 - C2 -1KSW 7.3 SRC_HUMAN
69 PsiBlast_CBE 52.0131% -67 - C2 -2OG8 9.0 ?
33 PsiBlast_CBE 51.8331% -71 - C2 -4E26 4.6 BRAF_HUMAN
80 PsiBlast_CBE 50.4832% -67 - C2 -1YOM 6.8 SRC_HUMAN
61 PsiBlast_CBE 47.7436% -91 - C2 -3P86 7.9 CTR1_ARATH
75 PsiBlast_CBE 39.9637% -83 - C2 -3A4O 4.5