@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : KCC2D_HUMAN: (2013-07-21 )
MASTTTCTRFTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSAAKSLLKKPDGVKESTESSNTTIEDEDVKARKQEIIKVTEQLIEAINNGDFEAYTKICDPGLTAFEPEALGNLVEGMDFHRFYFENALSKSNKPIHTIILNPHVHLVGDDAACIAYIRLTQYMDGSGMPKTMQSEETRVWHRRDGKWQNVHFHRSGSPTVPIKPPCIPNGKENFSGGTSLWQNI

Atome Classification :

(56 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




GVD_B_8(2VN9)
KCC2D_HUMAN
[Raw transfer]




ATP_A_4(1PHK)
PHKG1_RABIT
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]




ATP_B_2(1QL6)
PHKG1_RABIT
[Raw transfer]




ADP_A_2(2XUU)
DAPK1_HUMAN
[Raw transfer]




ANP_A_2(3MFU)
CSKP_HUMAN
[Raw transfer]




ANP_A_2(3MFS)
CSKP_HUMAN
[Raw transfer]




ANP_A_5(3IGO)
?
[Raw transfer]




5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]




ATP_A_5(2PHK)
PHKG1_RABIT
[Raw transfer]




ATP_B_6(2YAA)
DAPK2_MOUSE
[Raw transfer]




ADP_A_2(2W4K)
DAPK1_HUMAN
[Raw transfer]




K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




ATP_A_3(2YAA)
DAPK2_MOUSE
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_B_4(4FG9)
KCC1A_HUMAN
[Raw transfer]




0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]




B6A_A_2(3UPX)
?
[Raw transfer]




C88_A_2(3V5P)
?
[Raw transfer]




BK6_A_2(3T3U)
?
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




GOL_A_9(3HZT)
?
[Raw transfer]




IQU_D_8(2CKE)
DAPK2_HUMAN
[Raw transfer]




3AM_A_3(3C0G)
CSKP_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




ANP_A_6(3HX4)
?
[Raw transfer]




DTQ_A_2(3NYV)
?
[Raw transfer]




BK5_A_2(3SXF)
?
[Raw transfer]




ANP_A_7(3LIJ)
?
[Raw transfer]




AMP_B_4(3C0H)
CSKP_HUMAN
[Raw transfer]




BK1_A_2(3I7B)
?
[Raw transfer]




3AM_B_4(3C0G)
CSKP_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




IQU_C_7(2CKE)
DAPK2_HUMAN
[Raw transfer]




BK1_A_5(3NCG)
?
[Raw transfer]




AMP_A_3(3C0H)
CSKP_HUMAN
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




B49_A_5(2Y7J)
PHKG2_HUMAN
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




IQU_B_6(2CKE)
DAPK2_HUMAN
[Raw transfer]




BK3_A_2(3N51)
?
[Raw transfer]




IQU_A_5(2CKE)
DAPK2_HUMAN
[Raw transfer]




B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




ANP_A_2(3MFR)
CSKP_HUMAN
[Raw transfer]




BK3_A_6(3MWU)
?
[Raw transfer]




B49_D_8(2Y7J)
PHKG2_HUMAN
[Raw transfer]




MES_A_2(2Y0A)
DAPK1_HUMAN
[Raw transfer]




J60_A_6(2JAM)
KCC1G_HUMAN
[Raw transfer]




J60_B_10(2JAM)
KCC1G_HUMAN
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




SL0_A_2(3UBD)
KS6A3_MOUSE
[Raw transfer]




EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]




EDO_A_4(3T3U)
?
[Raw transfer]




EDO_A_3(3I7B)
?
[Raw transfer]




138 HHSearch 83.3489% -95 - C1 -3SOA 4.7 KCC2A_HUMAN
2 PsiBlast_PDB 80.0999%-124 - C1 -2WEL 6.0 KCC2D_HUMAN
3 PsiBlast_PDB 79.7399%-114 - C1 -2VN9 7.1 KCC2D_HUMAN
21 PsiBlast_CBE 77.2799%-114 - C1 -2VN9 7.0 KCC2D_HUMAN
5 PsiBlast_PDB 76.7991%-115 - C1 -3BHH 6.1 KCC2B_HUMAN
22 PsiBlast_CBE 76.2791%-114 - C1 -3BHH 6.4 KCC2B_HUMAN
4 PsiBlast_PDB 76.1691%-109 - C1 -2V7O 6.7 KCC2G_HUMAN
150 HHSearch 66.1648%-100 - C1 -3C0I 5.0 CSKP_HUMAN
13 PsiBlast_PDB 65.4749%-100 - C1 -3MFU 4.5 CSKP_HUMAN
17 PsiBlast_PDB 65.1547%-103 - C1 -3C0H 4.2 CSKP_HUMAN
11 PsiBlast_PDB 64.9149%-103 - C1 -3MFS 5.1 CSKP_HUMAN
10 PsiBlast_PDB 64.7449%-100 - C1 -3MFR 4.0 CSKP_HUMAN
36 PsiBlast_CBE 63.4347%-104 - C1 -3C0H 4.0 CSKP_HUMAN
140 HHSearch 62.9943%-112 * C1 *4FG7 4.4 KCC1A_HUMAN
114 PsiBlast_CBE 62.9141%-114 - C1 -2PHK 5.1 PHKG1_RABIT
113 PsiBlast_CBE 62.8540%-112 - C1 -1PHK 5.8 PHKG1_RABIT
108 PsiBlast_CBE 62.1038%-105 - C1 -2CKE 3.9 DAPK2_HUMAN
16 PsiBlast_PDB 61.4047%-100 - C1 -3C0G 4.0 CSKP_HUMAN
104 PsiBlast_CBE 61.3440%-111 - C1 -1QL6 5.9 PHKG1_RABIT
106 PsiBlast_CBE 61.2338%-102 - C1 -2CKE 3.7 DAPK2_HUMAN
94 PsiBlast_CBE 61.0240%-113 - C1 -2Y7J 6.5 PHKG2_HUMAN
105 PsiBlast_CBE 60.1438%-103 - C1 -2CKE 3.9 DAPK2_HUMAN
95 PsiBlast_CBE 59.8840%-115 - C1 -2Y7J 7.1 PHKG2_HUMAN
37 PsiBlast_CBE 59.6847% -99 - C1 -3C0G 4.6 CSKP_HUMAN
76 PsiBlast_CBE 59.6440%-113 - C1 -3LIJ 3.7 ?
84 PsiBlast_CBE 59.4741%-107 - C1 -4FG8 5.9 KCC1A_HUMAN
107 PsiBlast_CBE 59.2938%-107 - C1 -2CKE 3.8 DAPK2_HUMAN
93 PsiBlast_CBE 59.1540%-115 - C1 -2Y7J 6.3 PHKG2_HUMAN
80 PsiBlast_CBE 58.6843%-105 - C1 -3MA6 3.5 ?
89 PsiBlast_CBE 58.5037%-101 - C1 -2YAA 5.7 DAPK2_MOUSE
90 PsiBlast_CBE 58.2637%-103 - C1 -2YAA 5.1 DAPK2_MOUSE
83 PsiBlast_CBE 57.7841%-105 - C1 -4FG8 4.5 KCC1A_HUMAN
78 PsiBlast_CBE 57.5340%-101 - C1 -3HZT 3.2 ?
82 PsiBlast_CBE 56.8845%-106 - C1 -2JAM 6.6 KCC1G_HUMAN
79 PsiBlast_CBE 56.5243%-106 - C1 -3MA6 5.4 ?
81 PsiBlast_CBE 56.3445%-105 - C1 -2JAM 6.4 KCC1G_HUMAN
56 PsiBlast_CBE 55.7243%-102 - C1 -2W4O 5.4 KCC4_HUMAN
115 PsiBlast_CBE 55.5235%-100 - C1 -2W4K 5.4 DAPK1_HUMAN
153 HHSearch 55.3141% -94 - C1 -3MWU 3.5 ?
68 PsiBlast_CBE 54.7338% -90 - C1 -3UPX 5.1 ?
122 PsiBlast_CBE 54.5234%-101 - C1 -2Y0A 2.9 DAPK1_HUMAN
86 PsiBlast_CBE 54.3441% -99 - C1 -4FG9 5.8 KCC1A_HUMAN
159 HHSearch 53.6040% -99 - C1 -3NYV 5.0 ?
59 PsiBlast_CBE 53.4740% -97 - C1 -3IGO 5.6 ?
57 PsiBlast_CBE 53.2440% -96 - C1 -3NCG 6.6 ?
148 HHSearch 53.1733%-107 - C1 -4GV1 6.2 AKT1_HUMAN
120 PsiBlast_CBE 52.9834% -97 - C1 -2XUU 5.7 DAPK1_HUMAN
85 PsiBlast_CBE 52.9841% -98 - C1 -4FG9 5.9 KCC1A_HUMAN
77 PsiBlast_CBE 51.7942% -93 - C1 -2WEI 3.4 ?
74 PsiBlast_CBE 50.9338% -84 - C1 -3I7B 3.2 ?
70 PsiBlast_CBE 50.6538% -85 - C1 -3T3U 3.2 ?
73 PsiBlast_CBE 50.1638% -84 - C1 -3N51 4.9 ?
65 PsiBlast_CBE 49.9438% -85 - C1 -3V5P 5.0 ?
62 PsiBlast_CBE 49.7638% -85 - C1 -3HX4 4.0 ?
71 PsiBlast_CBE 49.6038% -82 - C1 -3SXF 5.3 ?
146 HHSearch 40.5732% -96 - C1 -3UBD 6.6 KS6A3_MOUSE