@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : KKCC2_HUMAN: (2013-07-22 )
MSSCVSSQPSSNRAAPQDELGGRGSSSSESQKPCEALRGLSSLSIHLGMESFIVVTECEPGCAVDLGLARDRPLEADGQEVPLDTSGSQARPHLSGRKLSLQERSQGGLAAGGSLDMNGRCICPSLPYSPVSSPQSSPRLPRRPTVESHHVSITGMQDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTRHGAEPLPSEDENCTLVEVTEEEVENSVKHIPSLATVILVKTMIRKRSFGNPFEGSRREERSLSAPGNLLTKKPTRECESLSELKEARQRRQPPGHRPAPRGGGGSALVRGSPCVESCWAPAPGSPARMHPLRPEEAMEPE

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2PY_C_3(2OH0)
KAPCA_BOVIN
[Raw transfer]




2EA_C_3(2F7E)
KAPCA_BOVIN
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]




6EA_C_3(2F7Z)
KAPCA_BOVIN
[Raw transfer]




4PY_C_3(2OJF)
KAPCA_BOVIN
[Raw transfer]




GVD_B_8(2VN9)
KCC2D_HUMAN
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




4EA_C_3(2F7X)
KAPCA_BOVIN
[Raw transfer]




0XZ_A_2(4GV1)
AKT1_HUMAN
[Raw transfer]




STU_A_5(2Y94)
AAPK1_RAT
[Raw transfer]




K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]




LWH_A_2(2XM9)
CHK2_HUMAN
[Raw transfer]




609_A_2(2ZV2)
KKCC2_HUMAN
[Raw transfer]




ANP_A_5(3IGO)
?
[Raw transfer]




DBQ_A_4(2CN8)
CHK2_HUMAN
[Raw transfer]




BK1_A_5(3NCG)
?
[Raw transfer]




R4L_A_2(4B99)
MK07_HUMAN
[Raw transfer]




WTI_A_2(2WTI)
CHK2_HUMAN
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




BK3_A_6(3MWU)
?
[Raw transfer]




VGM_A_2(2WTC)
CHK2_HUMAN
[Raw transfer]




ADE_A_3(4DC2)
KPCI_MOUSE
[Raw transfer]




HCW_A_2(2YCR)
CHK2_HUMAN
[Raw transfer]




EDO_A_3(4BDE)
?
[Raw transfer]




DB8_A_2(3SOA)
KCC2A_HUMAN
[Raw transfer]




EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]




ODO_A_4(4BDB)
?
[Raw transfer]




EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]




1 PsiBlast_PDB 86.96100%-116 - C1 -2ZV2 8.0 KKCC2_HUMAN
96 HHSearch 64.4831%-104 - C1 -2Y94 8.0 AAPK1_RAT
7 PsiBlast_PDB 63.7832% -99 - C1 -2VN9 5.8 KCC2D_HUMAN
83 HHSearch 63.6232%-107 - C1 -4GV1 6.6 AKT1_HUMAN
32 PsiBlast_CBE 61.8531% -99 - C1 -2V7O 5.2 KCC2G_HUMAN
68 PsiBlast_CBE 61.5031%-103 - C1 -2F7Z 6.5 KAPCA_BOVIN
66 PsiBlast_CBE 61.2031%-102 - C1 -2OJF 6.5 KAPCA_BOVIN
67 PsiBlast_CBE 60.8931%-101 - C1 -2OH0 6.7 KAPCA_BOVIN
6 PsiBlast_PDB 60.6232%-101 - C1 -2WEL 5.6 KCC2D_HUMAN
69 PsiBlast_CBE 60.3731%-100 - C1 -2F7X 7.0 KAPCA_BOVIN
22 PsiBlast_CBE 59.8632% -98 - C1 -2VN9 4.2 KCC2D_HUMAN
70 PsiBlast_CBE 59.5831%-104 - C1 -2F7E 7.0 KAPCA_BOVIN
44 PsiBlast_CBE 57.7031% -97 - C1 -3SOA 2.9 KCC2A_HUMAN
48 PsiBlast_CBE 53.7931% -99 - C1 -3BHH 6.5 KCC2B_HUMAN
49 PsiBlast_CBE 53.5331% -97 - C1 -3BHH 6.5 KCC2B_HUMAN
9 PsiBlast_PDB 53.0231% -97 - C1 -2CN8 4.3 CHK2_HUMAN
30 PsiBlast_CBE 52.6931% -99 - C1 -4BDD - ?
12 PsiBlast_PDB 52.5731% -95 - C1 -2WTI 6.1 CHK2_HUMAN
40 PsiBlast_CBE 52.3831% -92 - C1 -2YCR 6.8 CHK2_HUMAN
61 PsiBlast_CBE 52.1031% -94 - C1 -3MWU 3.4 ?
62 PsiBlast_CBE 51.7631% -95 - C1 -3IGO 5.7 ?
14 PsiBlast_PDB 51.2831% -92 - C1 -2XM9 6.2 CHK2_HUMAN
23 PsiBlast_CBE 51.2731% -96 - C1 -4BDK - ?
20 PsiBlast_PDB 51.0531%-100 - C1 -4BDB 3.4 ?
60 PsiBlast_CBE 50.0431% -97 - C1 -3NCG 6.7 ?
19 PsiBlast_PDB 49.4031% -98 - C1 -4BDA - ?
29 PsiBlast_CBE 49.0831% -96 - C1 -4BDE 3.3 ?
10 PsiBlast_PDB 49.0131% -95 - C1 -2WTC 4.2 CHK2_HUMAN
26 PsiBlast_CBE 48.2331% -99 - C1 -4BDH - ?