@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : KPCD3_HUMAN: (2013-07-22 )
MSANNSPPSAQKSVLPTAIPAVLPAASPCSSPKTGLSARLSNGSFSAPSLTNSRGSVHTVSFLLQIGLTRESVTIEAQELSLSAVKDLVCSIVYQKFPECGFFGMYDKILLFRHDMNSENILQLITSADEIHEGDLVEVVLSALATVEDFQIRPHTLYVHSYKAPTFCDYCGEMLWGLVRQGLKCEGCGLNYHKRCAFKIPNNCSGVRKRRLSNVSLPGPGLSVPRPLQPEYVALPSEESHVHQEPSKRIPSWSGRPIWMEKMVMCRVKVPHTFAVHSYTRPTICQYCKRLLKGLFRQGMQCKDCKFNCHKRCASKVPRDCLGEVTFNGEPSSLGTDTDIPMDIDNNDINSDSSRGLDDTEEPSPPEDKMFFLDPSDLDVERDEEAVKTISPSTSNNIPLMRVVQSIKHTKRKSSTMVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIITDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALMPVTPQASVCTSPGQGKDHKDLSTSISVSNCQIQENVDISTVYQIFADEVLGSGQFGIVYGGKHRKTGRDVAIKVIDKMRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKSRLPERITKFMVTQILVALRNLHFKNIVHCDLKPENVLLASAEPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRSKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWREISGEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLDLREFETRIGERYITHESDDARWEIHAYTHNLVYPKHFIMAPNPDDMEEDP

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




ANP_A_2(3F5U)
DAPK1_HUMAN
[Raw transfer]




ANP_A_2(3EHA)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(2W4J)
DAPK1_HUMAN
[Raw transfer]




ANP_A_5(3IGO)
?
[Raw transfer]




ATP_B_6(2YAA)
DAPK2_MOUSE
[Raw transfer]




ADP_A_2(2XUU)
DAPK1_HUMAN
[Raw transfer]




ACP_A_5(3ZXT)
DAPK1_HUMAN
[Raw transfer]




ADP_A_2(2W4K)
DAPK1_HUMAN
[Raw transfer]




ADP_A_6(2CN5)
CHK2_HUMAN
[Raw transfer]




ANP_A_8(3Q5I)
?
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(2YAA)
DAPK2_MOUSE
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




ANP_A_2(3MFS)
CSKP_HUMAN
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




38R_A_2(3ZDU)
CDKL3_HUMAN
[Raw transfer]




ANP_A_2(3MFU)
CSKP_HUMAN
[Raw transfer]




GOL_A_12(3HX4)
?
[Raw transfer]




IQU_D_8(2CKE)
DAPK2_HUMAN
[Raw transfer]




GOL_A_4(3HZT)
?
[Raw transfer]




STU_B_2(1WVY)
DAPK1_HUMAN
[Raw transfer]




5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




3AM_A_2(3C0I)
CSKP_HUMAN
[Raw transfer]




GOL_A_9(3HZT)
?
[Raw transfer]




IQU_C_7(2CKE)
DAPK2_HUMAN
[Raw transfer]




LWH_A_2(2XM9)
CHK2_HUMAN
[Raw transfer]




BK3_A_2(3N51)
?
[Raw transfer]




DKI_A_2(2W4O)
KCC4_HUMAN
[Raw transfer]




P3J_A_2(4BDG)
?
[Raw transfer]




ANP_A_2(3MFR)
CSKP_HUMAN
[Raw transfer]




J60_A_7(3HZT)
?
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




BK1_A_2(3I7B)
?
[Raw transfer]




OSV_A_2(2YAK)
DAPK1_HUMAN
[Raw transfer]




A9T_A_2(4A9T)
CHK2_HUMAN
[Raw transfer]




DRG_A_2(1P4F)
DAPK1_HUMAN
[Raw transfer]




NXP_A_2(2YCS)
CHK2_HUMAN
[Raw transfer]




HCW_A_2(2YCR)
CHK2_HUMAN
[Raw transfer]




EDO_A_5(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_B_8(2JAM)
KCC1G_HUMAN
[Raw transfer]




EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]




EDO_A_3(3I7B)
?
[Raw transfer]




EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]




33 PsiBlast_CBE 70.2734%-107 - C1 -3MFR 3.9 CSKP_HUMAN
32 PsiBlast_CBE 70.0034%-107 - C1 -3MFS 4.6 CSKP_HUMAN
31 PsiBlast_CBE 68.8334%-103 - C1 -3MFU 4.4 CSKP_HUMAN
47 PsiBlast_CBE 66.5033%-104 - C1 -3C0I 4.5 CSKP_HUMAN
116 HHSearch 66.1135%-112 * C1 *4FG7 4.5 KCC1A_HUMAN
136 HHSearch 65.9635%-104 - C1 -3Q5I 4.1 ?
57 PsiBlast_CBE 65.7935%-107 - C1 -3HX4 4.3 ?
54 PsiBlast_CBE 65.3034% -96 - C1 -2XUU 5.8 DAPK1_HUMAN
20 PsiBlast_PDB 64.8434%-118 - C1 -4FG8 5.7 KCC1A_HUMAN
94 PsiBlast_CBE 64.6933% -94 - C1 -2W4J 5.1 DAPK1_HUMAN
89 PsiBlast_CBE 64.6133% -95 - C1 -2W4K 5.5 DAPK1_HUMAN
88 PsiBlast_CBE 64.5033% -99 - C1 -2YAK 8.1 DAPK1_HUMAN
95 PsiBlast_CBE 64.4133% -97 - C1 -1WVY 7.4 DAPK1_HUMAN
125 HHSearch 64.0734%-102 - C1 -4GV1 - AKT1_HUMAN
30 PsiBlast_CBE 63.5236%-102 - C1 -2WEL 3.4 KCC2D_HUMAN
7 PsiBlast_PDB 63.3139%-106 - C1 -2YCS 6.3 CHK2_HUMAN
9 PsiBlast_PDB 63.0839%-106 - C1 -2CN5 6.2 CHK2_HUMAN
2 PsiBlast_PDB 63.0539%-107 - C1 -2YCR 6.4 CHK2_HUMAN
58 PsiBlast_CBE 62.9834%-108 - C1 -3BHH 5.9 KCC2B_HUMAN
39 PsiBlast_CBE 62.9635%-104 - C1 -2V7O 6.3 KCC2G_HUMAN
23 PsiBlast_CBE 62.8234%-116 - C1 -4FG8 4.7 KCC1A_HUMAN
59 PsiBlast_CBE 62.6734%-106 - C1 -3BHH 5.6 KCC2B_HUMAN
77 PsiBlast_CBE 62.6333% -97 - C1 -3EHA 6.9 DAPK1_HUMAN
74 PsiBlast_CBE 62.5833% -92 - C1 -3F5U 5.9 DAPK1_HUMAN
38 PsiBlast_CBE 62.4837%-107 - C1 -3HZT 6.4 ?
29 PsiBlast_CBE 62.3835% -95 - C1 -3IGO 5.2 ?
42 PsiBlast_CBE 62.3635%-103 - C1 -2YAA 5.4 DAPK2_MOUSE
43 PsiBlast_CBE 62.2135%-102 - C1 -2YAA 5.1 DAPK2_MOUSE
25 PsiBlast_CBE 62.1434%-119 - C1 -4FG9 5.4 KCC1A_HUMAN
12 PsiBlast_PDB 62.1339%-110 - C1 -4BDG 3.5 ?
70 PsiBlast_CBE 61.5135% -99 - C1 -3I7B 5.3 ?
105 PsiBlast_CBE 61.0734%-101 - C1 -2CKE 4.1 DAPK2_HUMAN
83 PsiBlast_CBE 60.8533% -97 - C1 -1P4F 4.9 DAPK1_HUMAN
11 PsiBlast_PDB 60.8039% -99 - C1 -4A9T 6.0 CHK2_HUMAN
17 PsiBlast_PDB 60.7337%-105 - C1 -2W4O 5.4 KCC4_HUMAN
69 PsiBlast_CBE 60.6935% -96 - C1 -3N51 6.2 ?
10 PsiBlast_PDB 60.5039%-104 - C1 -2XM9 7.7 CHK2_HUMAN
37 PsiBlast_CBE 60.4336%-105 - C1 -2VN9 6.8 KCC2D_HUMAN
16 PsiBlast_PDB 59.9037%-105 - C1 -2JAM 2.0 KCC1G_HUMAN
106 PsiBlast_CBE 59.8034% -99 - C1 -2CKE 3.8 DAPK2_HUMAN
87 PsiBlast_CBE 59.1033% -98 - C1 -3ZXT 4.4 DAPK1_HUMAN
22 PsiBlast_CBE 57.7937%-101 - C1 -2JAM 2.5 KCC1G_HUMAN
130 HHSearch 55.3730% -89 - C1 -3ZDU 6.6 CDKL3_HUMAN