@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : KPCD_HUMAN: (2015-06-17 )
MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEGRVIQIVLMRAAEEPVSEVTVGVSVLAERCKKNNGKAEFWLDLQPQAKVLMSVQYFLEDVDCKQSMRSEDEAKFPTMNRRGAIKQAKIHYIKNHEFIATFFGQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDKIIGRCTGTAANSRDTIFQKERFNIDMPHRFKVHNYMSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCREKVANLCGINQKLLAEALNQVTQRASRRSDSASSEPVGIYQGFEKKTGVAGEDMQDNSGTYGKIWEGSSKCNINNFIFHKVLGKGSFGKVLLGELKGRGEYFAIKALKKDVVLIDDDVECTMVEKRVLTLAAENPFLTHLICTFQTKDHLFFVMEFLNGGDLMYHIQDKGRFELYRATFYAAEIMCGLQFLHSKGIIYRDLKLDNVLLDRDGHIKIADFGMCKENIFGESRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFEREPTKRLGVTGNIKIHPFFKTINWTLLEKRRLEPPFRPKVKSPRDYSNFDQEFLNEKARLSYSDKNLIDSMDQSAFAGFSFVNPKFEHLLED

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_3(1O6K)
AKT2_HUMAN
[Raw transfer]




ANP_A_4(2R5T)
SGK1_HUMAN
[Raw transfer]




ADP_E_6(1RDQ)
KAPCA_MOUSE
[Raw transfer]




L20_A_3(2JDR)
AKT2_HUMAN
[Raw transfer]




ATP_A_3(3A8W)
KPCI_HUMAN
[Raw transfer]




SS3_A_3(2UZT)
KAPCA_BOVIN
[Raw transfer]




ADP_A_6(3C4Z)
RK_BOVIN
[Raw transfer]




SS4_E_3(2UZW)
KAPCA_BOVIN
[Raw transfer]




MMG_A_2(3HDM)
SGK1_HUMAN
[Raw transfer]




L20_E_3(2UZU)
KAPCA_BOVIN
[Raw transfer]




GMG_A_2(3HDN)
SGK1_HUMAN
[Raw transfer]




07U_A_2(3TXO)
KPCL_HUMAN
[Raw transfer]




STU_B_2(1XJD)

[Raw transfer]




I5S_A_3(2JDO)
AKT2_HUMAN
[Raw transfer]




ACP_A_3(2Z7Q)
KS6A1_HUMAN
[Raw transfer]




ANP_A_7(3PFQ)
KPCB_RAT
[Raw transfer]




STU_A_2(3A62)
KS6B1_HUMAN
[Raw transfer]




STU_A_2(2Z7R)
KS6A1_HUMAN
[Raw transfer]




5FI_A_2(4L43)
KS6B1_HUMAN
[Raw transfer]




5FI_A_5(4L44)
KS6B1_HUMAN
[Raw transfer]




5FI_A_2(4L46)
KS6B1_HUMAN
[Raw transfer]




C58_A_9(3ZH8)
KPCI_HUMAN
[Raw transfer]




ADE_A_3(4DC2)
KPCI_MOUSE
[Raw transfer]




SL0_A_2(3UBD)
KS6A3_MOUSE
[Raw transfer]




AFE_A_2(4EL9)
KS6A3_MOUSE
[Raw transfer]




EDO_A_4(2JDO)
AKT2_HUMAN
[Raw transfer]




SS5_A_3(2UZV)
KAPCA_BOVIN
[Raw transfer]




67 HHSearch 91.0951% -95 - C3 -3PFQ 3.9 KPCB_RAT
1 PsiBlast_PDB 84.5872%-116 - C3 -1XJD 8.9
5 PsiBlast_PDB 77.1255%-102 - C3 -3TXO 6.6 KPCL_HUMAN
20 PsiBlast_PDB 76.9642%-112 - C3 -2JDR 7.6 AKT2_HUMAN
19 PsiBlast_PDB 76.7042%-111 - C3 -2JDO 5.9 AKT2_HUMAN
9 PsiBlast_PDB 76.2842%-107 - C3 -4DC2 4.0 KPCI_MOUSE
11 PsiBlast_PDB 76.0743%-103 - C3 -3ZH8 7.4 KPCI_HUMAN
12 PsiBlast_PDB 75.9643%-106 - C3 -3A8W 6.7 KPCI_HUMAN
18 PsiBlast_PDB 75.7942%-108 - C3 -1O6K 6.4 AKT2_HUMAN
84 HHSearch 72.6837% -98 - C3 -3C4Z 6.0 RK_BOVIN
27 PsiBlast_CBE 71.9640% -94 - C3 -4L43 7.7 KS6B1_HUMAN
29 PsiBlast_CBE 71.8840% -98 - C3 -4L46 8.0 KS6B1_HUMAN
26 PsiBlast_CBE 70.2640% -86 - C3 -4L44 7.7 KS6B1_HUMAN
52 PsiBlast_CBE 69.9439% -92 - C3 -2UZW 6.0 KAPCA_BOVIN
25 PsiBlast_CBE 69.7443%-112 - C3 -2R5T 6.4 SGK1_HUMAN
85 HHSearch 69.6241%-102 * C3 *3A62 8.5 KS6B1_HUMAN
55 PsiBlast_CBE 69.4439% -92 - C3 -2UZT 7.2 KAPCA_BOVIN
80 HHSearch 69.2640% -86 - C3 -1RDQ 7.3 KAPCA_MOUSE
23 PsiBlast_CBE 69.1843%-110 - C3 -3HDN 7.7 SGK1_HUMAN
51 PsiBlast_CBE 68.8641%-107 - C3 -3UBD 6.6 KS6A3_MOUSE
24 PsiBlast_CBE 68.8143%-107 - C3 -3HDM 6.9 SGK1_HUMAN
54 PsiBlast_CBE 68.5039% -91 - C3 -2UZU 6.0 KAPCA_BOVIN
50 PsiBlast_CBE 68.4841%-106 - C3 -4EL9 7.1 KS6A3_MOUSE
53 PsiBlast_CBE 25.9139% 33 - C3 -2UZV Error KAPCA_BOVIN