@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : NLK_HUMAN: (2015-06-18 )
MSLCGARANAKMMAAYNGGTSAAAAGHHHHHHHHLPHLPPPHLHHHHHPQHHLHPGSAAAVHPVQQHTSSAAAAAAAAAAAAAMLNPGQQQPYFPSPAPGQAPGPAAAAPAQVQAAAAATVKAHHHQHSHHPQQQLDIEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTSTGRVYTSDFEPVTNPKFDDTFEKNLSSVRQVKEIIHQFILEQQKGNRVPLCINPQSAAFKSFISSTVAQPSEMPPSPLVWE

Atome Classification :

(14 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(4IC7)
MK07_HUMAN
[Raw transfer]




ADP_A_4(2B9H)
FUS3_YEAST
[Raw transfer]




3NW_A_2(3NWW)
MK14_HUMAN
[Raw transfer]




P39_A_2(3BV3)
MK14_HUMAN
[Raw transfer]




39P_B_4(3MVM)
MK14_HUMAN
[Raw transfer]




P38_A_2(3BV2)
MK14_HUMAN
[Raw transfer]




ANP_A_7(1CM8)
MK12_HUMAN
[Raw transfer]




39P_A_3(3MVM)
MK14_HUMAN
[Raw transfer]




287_A_2(2RG6)
MK14_HUMAN
[Raw transfer]




279_A_2(2RG5)
MK14_HUMAN
[Raw transfer]




GOL_A_3(3N9X)
?
[Raw transfer]




R4L_A_2(4B99)
MK07_HUMAN
[Raw transfer]




R4L_A_2(4B99)
MK07_HUMAN
[Raw transfer]




JBI_A_2(3TTJ)
MK10_HUMAN
[Raw transfer]




P7B_A_2(3P7B)
MK14_MOUSE
[Raw transfer]




1R9_A_3(4KIP)
MK14_HUMAN
[Raw transfer]




Z8B_A_2(3QYZ)
MK01_RAT
[Raw transfer]




P79_A_3(3P79)
MK14_MOUSE
[Raw transfer]




LGF_A_2(2QD9)
MK14_HUMAN
[Raw transfer]




P7C_A_3(3P7C)
MK14_MOUSE
[Raw transfer]




B45_A_4(3GC9)
MK11_HUMAN
[Raw transfer]




P78_A_3(3P78)
MK14_MOUSE
[Raw transfer]




B45_A_4(3GC8)
MK11_HUMAN
[Raw transfer]




BOG_X_3(2FST)
MK14_HUMAN
[Raw transfer]




BOG_A_7(3ZS5)
MK14_HUMAN
[Raw transfer]




121 HHSearch 89.6046%-118 - C1 -4IC7 5.4 MK07_HUMAN
120 HHSearch 88.4047%-124 * C1 *4B99 8.1 MK07_HUMAN
77 PsiBlast_CBE 88.4040%-131 - C1 -2QD9 7.3 MK14_HUMAN
67 PsiBlast_CBE 87.3740%-129 - C1 -3MVM 7.1 MK14_HUMAN
50 PsiBlast_CBE 87.1240%-133 - C1 -3P7B 8.7 MK14_MOUSE
52 PsiBlast_CBE 87.1140%-134 - C1 -3P79 7.6 MK14_MOUSE
74 PsiBlast_CBE 86.2740%-127 - C1 -3BV2 9.9 MK14_HUMAN
49 PsiBlast_CBE 86.2240%-133 - C1 -3P7C 7.9 MK14_MOUSE
75 PsiBlast_CBE 86.0440%-126 - C1 -2RG6 8.8 MK14_HUMAN
66 PsiBlast_CBE 85.7240%-128 - C1 -3NWW 8.2 MK14_HUMAN
134 HHSearch 82.5740%-120 - C1 -2B9H 5.5 FUS3_YEAST
126 HHSearch 82.2943%-132 - C1 -2FST 3.8 MK14_HUMAN
127 HHSearch 81.0538%-131 - C1 -3TTJ 7.9 MK10_HUMAN
129 HHSearch 80.7243%-115 - C1 -3QYZ 5.6 MK01_RAT