@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : NTRK1_HUMAN: (2013-07-23 )
MLRGGRRGQLGWHSWAAGPGSLLAWLILASAGAAPCPDACCPHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQGPLAHMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNPFEFNPEDPIPVSFSPVDTNSTSGDPVEKKDETPFGVSVAVGLAVFACLFLSTLLLVLNKCGRRNKFGINRPAVLAPEDGLAMSLHFMTLGGSSLSPTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVLG

Atome Classification :

(91 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0F4_A_4(3V5Q)
NTRK3_HUMAN
[Raw transfer]




351_B_4(3ETA)

[Raw transfer]




351_A_3(3ETA)
INSR_HUMAN
[Raw transfer]




EBI_A_2(3I81)

[Raw transfer]




ANP_A_2(4FL3)
KSYK_HUMAN
[Raw transfer]




V4Z_C_10(4AOJ)

[Raw transfer]




LGV_A_2(3NW7)

[Raw transfer]




STI_A_3(4BKJ)
?
[Raw transfer]




0LI_B_7(3ZOS)

[Raw transfer]




MUJ_A_2(4AT5)

[Raw transfer]




STI_B_14(4BKJ)
?
[Raw transfer]




LGX_A_2(3NW5)

[Raw transfer]




0LI_A_3(3ZOS)
DDR1_HUMAN
[Raw transfer]




LGW_A_2(3NW6)

[Raw transfer]




V4Z_B_7(4AOJ)
NTRK1_HUMAN
[Raw transfer]




571_A_2(2XBA)

[Raw transfer]




0S9_A_10(4F65)
FGFR1_HUMAN
[Raw transfer]




0S7_B_6(4F63)

[Raw transfer]




V4Z_A_4(4AOJ)
NTRK1_HUMAN
[Raw transfer]




ANP_D_4(1MQB)

[Raw transfer]




ACP_B_12(2PZP)

[Raw transfer]




ANP_A_3(2OZO)
ZAP70_HUMAN
[Raw transfer]




C4F_A_3(3C4F)
FGFR1_HUMAN
[Raw transfer]




C4F_B_4(3C4F)

[Raw transfer]




0S9_B_18(4F65)

[Raw transfer]




LTI_A_2(4AT3)

[Raw transfer]




STI_A_2(3GVU)
ABL2_HUMAN
[Raw transfer]




GQL_B_5(3GQL)
FGFR1_HUMAN
[Raw transfer]




T6E_A_2(4AT4)

[Raw transfer]




64M_A_2(4HW7)

[Raw transfer]




GQL_C_6(3GQL)

[Raw transfer]




NZF_A_2(4FNZ)

[Raw transfer]




VX6_A_5(2XYN)
ABL2_HUMAN
[Raw transfer]




ACP_A_3(1I44)

[Raw transfer]




STU_A_3(3CBL)

[Raw transfer]




GOL_A_3(3LCS)

[Raw transfer]




3RH_B_3(3RHX)

[Raw transfer]




ABG_B_8(2PWL)
FGFR2_HUMAN
[Raw transfer]




ACP_A_7(2PZP)
FGFR2_HUMAN
[Raw transfer]




0S7_A_3(4F63)
FGFR1_HUMAN
[Raw transfer]




ANP_A_4(3FXX)

[Raw transfer]




0JF_B_4(4DCE)

[Raw transfer]




GQL_A_4(3GQL)
FGFR1_HUMAN
[Raw transfer]




0JF_A_3(4DCE)
ALK_HUMAN
[Raw transfer]




01P_D_8(3QQU)

[Raw transfer]




GOL_A_2(3L9P)

[Raw transfer]




SU1_A_4(1FGI)
FGFR1_HUMAN
[Raw transfer]




ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]




3RH_A_6(3RHX)
FGFR1_HUMAN
[Raw transfer]




STU_A_2(3LCS)

[Raw transfer]




0S8_B_7(4F64)

[Raw transfer]




SU2_B_3(1AGW)

[Raw transfer]




SU1_B_3(1FGI)

[Raw transfer]




GS2_A_2(3EKK)

[Raw transfer]




VGH_A_2(2YFX)

[Raw transfer]




BMI_B_2(2OJ9)

[Raw transfer]




IFC_A_2(3DZQ)

[Raw transfer]




07J_B_7(3TT0)

[Raw transfer]




I3K_A_2(4FNY)

[Raw transfer]




GUI_A_2(2XB7)

[Raw transfer]




01P_B_6(3QQU)
IGF1R_HUMAN
[Raw transfer]




0VF_A_2(4FYO)

[Raw transfer]




VGH_A_2(4ANS)

[Raw transfer]




VGH_A_2(4ANQ)

[Raw transfer]




PD1_C_3(2FGI)

[Raw transfer]




01P_A_5(3QQU)
IGF1R_HUMAN
[Raw transfer]




ADP_A_3(3LCT)

[Raw transfer]




ACK_A_6(2IVS)
RET_HUMAN
[Raw transfer]




PD1_D_4(2FGI)
FGFR1_HUMAN
[Raw transfer]




ANP_A_5(2QOC)

[Raw transfer]




C07_A_2(4G2F)

[Raw transfer]




VGH_A_2(3ZBF)
?
[Raw transfer]




0US_A_2(4FOB)

[Raw transfer]




07J_A_3(3TT0)
FGFR1_HUMAN
[Raw transfer]




GS3_A_2(3EKN)

[Raw transfer]




01P_C_7(3QQU)
IGF1R_HUMAN
[Raw transfer]




P16_A_3(1OPK)
ABL1_MOUSE
[Raw transfer]




0UU_A_2(4FOC)

[Raw transfer]




PDR_A_5(3LVP)
IGF1R_HUMAN
[Raw transfer]




ANP_B_9(1JQH)
IGF1R_HUMAN
[Raw transfer]




DKI_A_2(3HMI)
ABL2_HUMAN
[Raw transfer]




VM1_A_3(3JS2)
FGFR1_HUMAN
[Raw transfer]




0UV_A_2(4FOD)

[Raw transfer]




EMH_A_2(3AOX)

[Raw transfer]




VM1_B_5(3JS2)

[Raw transfer]




CCX_B_7(3LW0)
IGF1R_HUMAN
[Raw transfer]




CCX_D_13(3LW0)

[Raw transfer]




CCX_C_10(3LW0)
IGF1R_HUMAN
[Raw transfer]




CCX_A_5(3LW0)
IGF1R_HUMAN
[Raw transfer]




EDO_B_8(4F64)

[Raw transfer]




EDO_B_7(4F63)

[Raw transfer]




EDO_A_4(3AOX)

[Raw transfer]




EDO_A_13(4BKJ)
?
[Raw transfer]




22 PsiBlast_CBE 92.04100%-132 - C3 -4AOJ 8.0
23 PsiBlast_CBE 91.87100%-134 - C3 -4AOJ 7.9 NTRK1_HUMAN
122 HHSearch 91.72100%-135 - C3 -4AOJ 8.1 NTRK1_HUMAN
5 PsiBlast_PDB 86.0875%-123 - C3 -4AT3 6.9
6 PsiBlast_PDB 85.6375%-126 - C3 -4AT4 9.6
7 PsiBlast_PDB 85.5375%-120 - C3 -4AT5 9.0
8 PsiBlast_PDB 84.5276%-129 - C3 -3V5Q 10.9 NTRK3_HUMAN
60 PsiBlast_CBE 75.9841%-120 - C3 -4FOB 8.9
58 PsiBlast_CBE 75.7041%-124 - C3 -2XB7 6.9
59 PsiBlast_CBE 75.5041%-120 - C3 -4FOC 8.6
48 PsiBlast_CBE 75.3440%-112 - C3 -3LCS 8.8
51 PsiBlast_CBE 75.2241%-124 - C3 -4DCE 9.6
50 PsiBlast_CBE 75.0941%-118 - C3 -4FOD 10.0
49 PsiBlast_CBE 75.0541%-121 - C3 -4FNW -
57 PsiBlast_CBE 74.7641%-127 - C3 -2XBA 6.9
130 HHSearch 74.6541%-119 - C3 -3CBL 8.5
56 PsiBlast_CBE 74.6041%-121 - C3 -2YFX 7.4
54 PsiBlast_CBE 74.4941%-119 - C3 -4FNZ 8.6
39 PsiBlast_CBE 74.4540%-111 - C3 -3L9P 2.6
62 PsiBlast_CBE 74.4141%-124 - C3 -4FNY 10.8
52 PsiBlast_CBE 74.2541%-120 - C3 -4DCE 8.9 ALK_HUMAN
36 PsiBlast_CBE 74.2445%-116 - C3 -4BKJ 8.4 ?
47 PsiBlast_CBE 74.2040%-107 - C3 -3LCT 4.7
61 PsiBlast_CBE 74.1841%-121 - C3 -4ANQ 7.5
64 PsiBlast_CBE 74.0741%-120 - C3 -4ANS 7.5
28 PsiBlast_CBE 73.8342%-115 - C3 -3LW0 4.3 IGF1R_HUMAN
35 PsiBlast_CBE 73.6445%-112 - C3 -4BKJ 8.3 ?
53 PsiBlast_CBE 73.5341%-119 - C3 -3AOX 6.5
16 PsiBlast_PDB 73.2742%-117 - C3 -3LW0 3.4 IGF1R_HUMAN
27 PsiBlast_CBE 73.2342%-116 - C3 -3LW0 3.7 IGF1R_HUMAN
26 PsiBlast_CBE 73.0242%-114 - C3 -3LW0 4.6
37 PsiBlast_CBE 72.8745%-106 - C3 -3ZOS 10.1
24 PsiBlast_CBE 72.5441%-114 - C3 -1JQH 4.4 IGF1R_HUMAN
81 PsiBlast_CBE 72.5339%-118 - C3 -3ZBF 7.4 ?
38 PsiBlast_CBE 72.4645%-109 - C3 -3ZOS 10.4 DDR1_HUMAN
19 PsiBlast_PDB 72.4341%-115 - C3 -2OJ9 8.0
140 HHSearch 72.4034%-110 - C3 -4FL3 6.3 KSYK_HUMAN
14 PsiBlast_PDB 72.3841%-114 - C3 -3I81 8.6
20 PsiBlast_PDB 72.2941%-113 - C3 -3NW5 7.7
65 PsiBlast_CBE 72.2239%-119 - C3 -1MQB 5.8
33 PsiBlast_CBE 72.1541%-113 - C3 -3NW6 8.6
107 PsiBlast_CBE 72.1339%-108 - C3 -4HW7 10.1
105 PsiBlast_CBE 72.1040%-119 - C3 -3GQL 6.4 FGFR1_HUMAN
32 PsiBlast_CBE 71.8841%-114 - C3 -3NW7 8.4
104 PsiBlast_CBE 71.8340%-123 - C3 -3GQL 6.4
70 PsiBlast_CBE 71.7136%-114 - C3 -2IVS 5.1 RET_HUMAN
84 PsiBlast_CBE 71.6140%-128 - C3 -4F65 8.4
41 PsiBlast_CBE 71.5443%-124 - C3 -3EKK 5.8
69 PsiBlast_CBE 71.4835%-119 - C3 -3FXX 4.4
46 PsiBlast_CBE 71.3643%-116 - C3 -1I44 5.1
15 PsiBlast_PDB 71.3444%-112 - C3 -3ETA 12.2 INSR_HUMAN
98 PsiBlast_CBE 71.3040%-121 - C3 -3JS2 3.9
29 PsiBlast_CBE 71.3041%-115 - C3 -3QQU 5.7
71 PsiBlast_CBE 71.2937%-123 - C3 -2QOC 4.9
93 PsiBlast_CBE 71.1740%-120 - C3 -1FGI 6.5 FGFR1_HUMAN
99 PsiBlast_CBE 71.1640%-119 - C3 -3JS2 4.3 FGFR1_HUMAN
25 PsiBlast_CBE 71.1644%-112 - C3 -3ETA 12.1
31 PsiBlast_CBE 71.0141%-118 - C3 -3QQU 6.9 IGF1R_HUMAN
13 PsiBlast_PDB 70.9841%-117 - C3 -3LVP 3.8 IGF1R_HUMAN
30 PsiBlast_CBE 70.8841%-113 - C3 -3QQU 8.3 IGF1R_HUMAN
75 PsiBlast_CBE 70.8637%-125 - C3 -3DZQ 6.9
17 PsiBlast_PDB 70.8641%-118 - C3 -3QQU 7.2 IGF1R_HUMAN
134 HHSearch 70.8535%-114 - C3 -2OZO 5.9 ZAP70_HUMAN
101 PsiBlast_CBE 70.6940%-122 - C3 -3RHX 6.2 FGFR1_HUMAN
77 PsiBlast_CBE 70.6237%-115 - C3 -3GVU 8.3 ABL2_HUMAN
89 PsiBlast_CBE 70.6040%-129 - C3 -4F63 5.2 FGFR1_HUMAN
100 PsiBlast_CBE 70.5340%-122 - C3 -3RHX 7.1
40 PsiBlast_CBE 70.5343%-115 - C3 -3EKN 6.0
85 PsiBlast_CBE 70.4440%-126 - C3 -4F65 8.2 FGFR1_HUMAN
82 PsiBlast_CBE 70.4240%-123 - C3 -3TT0 7.4
103 PsiBlast_CBE 70.2540%-118 - C3 -3C4F 7.4 FGFR1_HUMAN
76 PsiBlast_CBE 70.1837%-119 - C3 -3HMI 7.2 ABL2_HUMAN
66 PsiBlast_CBE 70.0939%-119 - C3 -1MQB 4.1 EPHA2_HUMAN
102 PsiBlast_CBE 70.0540%-118 - C3 -3C4F 7.3
86 PsiBlast_CBE 69.9940%-125 - C3 -4F64 6.4
111 PsiBlast_CBE 69.7238%-111 - C3 -2PWL 4.5 FGFR2_HUMAN
91 PsiBlast_CBE 69.6040%-126 - C3 -2FGI 6.7 FGFR1_HUMAN
92 PsiBlast_CBE 69.5640%-123 - C3 -1FGI 6.6
74 PsiBlast_CBE 69.5337%-121 - C3 -4G2F 4.6
131 HHSearch 69.4537%-113 - C3 -1OPK 9.0 ABL1_MOUSE
83 PsiBlast_CBE 69.3040%-111 - C3 -3TT0 7.1 FGFR1_HUMAN
78 PsiBlast_CBE 69.1937%-114 - C3 -2XYN - ABL2_HUMAN
94 PsiBlast_CBE 68.8340%-122 - C3 -1AGW 6.0
106 PsiBlast_CBE 68.7640%-116 - C3 -3GQL 6.7 FGFR1_HUMAN
79 PsiBlast_CBE 68.7037%-116 - C3 -2XYN - ABL2_HUMAN
88 PsiBlast_CBE 68.6540%-123 - C3 -4F63 5.6
90 PsiBlast_CBE 68.6240%-116 - C3 -2FGI 7.4
80 PsiBlast_CBE 68.5037%-118 - C3 -2XYN 6.9 ABL2_HUMAN
109 PsiBlast_CBE 68.3138%-113 - C3 -2PZP 4.8
110 PsiBlast_CBE 67.3038%-116 - C3 -2PZP 4.7 FGFR2_HUMAN
124 HHSearch 66.7234%-118 - C3 -4FYO 6.7


Add PDB User Result:

(80 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0F4_A_4(3V5Q)
NTRK3_HUMAN
[Raw transfer]




351_B_4(3ETA)

[Raw transfer]




351_A_3(3ETA)
INSR_HUMAN
[Raw transfer]




EBI_A_2(3I81)

[Raw transfer]




ANP_A_2(4FL3)
KSYK_HUMAN
[Raw transfer]




V4Z_C_10(4AOJ)

[Raw transfer]




LGV_A_2(3NW7)

[Raw transfer]




STI_A_3(4BKJ)
?
[Raw transfer]




0LI_B_7(3ZOS)

[Raw transfer]




MUJ_A_2(4AT5)

[Raw transfer]




STI_B_14(4BKJ)
?
[Raw transfer]




LGX_A_2(3NW5)

[Raw transfer]




0LI_A_3(3ZOS)
DDR1_HUMAN
[Raw transfer]




LGW_A_2(3NW6)

[Raw transfer]




V4Z_B_7(4AOJ)
NTRK1_HUMAN
[Raw transfer]




571_A_2(2XBA)

[Raw transfer]




0S9_A_10(4F65)
FGFR1_HUMAN
[Raw transfer]




0S7_B_6(4F63)

[Raw transfer]




V4Z_A_4(4AOJ)
NTRK1_HUMAN
[Raw transfer]




ANP_D_4(1MQB)

[Raw transfer]




ACP_B_12(2PZP)

[Raw transfer]




ANP_A_3(2OZO)
ZAP70_HUMAN
[Raw transfer]




C4F_A_3(3C4F)
FGFR1_HUMAN
[Raw transfer]




C4F_B_4(3C4F)

[Raw transfer]




0S9_B_18(4F65)

[Raw transfer]




LTI_A_2(4AT3)

[Raw transfer]




STI_A_2(3GVU)
ABL2_HUMAN
[Raw transfer]




GQL_B_5(3GQL)
FGFR1_HUMAN
[Raw transfer]




T6E_A_2(4AT4)

[Raw transfer]




64M_A_2(4HW7)

[Raw transfer]




GQL_C_6(3GQL)

[Raw transfer]




NZF_A_2(4FNZ)

[Raw transfer]




VX6_A_5(2XYN)
ABL2_HUMAN
[Raw transfer]




ACP_A_3(1I44)

[Raw transfer]




STU_A_3(3CBL)

[Raw transfer]




GOL_A_3(3LCS)

[Raw transfer]




3RH_B_3(3RHX)

[Raw transfer]




ABG_B_8(2PWL)
FGFR2_HUMAN
[Raw transfer]




ACP_A_7(2PZP)
FGFR2_HUMAN
[Raw transfer]




0S7_A_3(4F63)
FGFR1_HUMAN
[Raw transfer]




ANP_A_4(3FXX)

[Raw transfer]




0JF_B_4(4DCE)

[Raw transfer]




GQL_A_4(3GQL)
FGFR1_HUMAN
[Raw transfer]




0JF_A_3(4DCE)
ALK_HUMAN
[Raw transfer]




01P_D_8(3QQU)

[Raw transfer]




GOL_A_2(3L9P)

[Raw transfer]




SU1_A_4(1FGI)
FGFR1_HUMAN
[Raw transfer]




ANP_C_3(1MQB)
EPHA2_HUMAN
[Raw transfer]




3RH_A_6(3RHX)
FGFR1_HUMAN
[Raw transfer]




STU_A_2(3LCS)

[Raw transfer]




0S8_B_7(4F64)

[Raw transfer]




SU2_B_3(1AGW)

[Raw transfer]




SU1_B_3(1FGI)

[Raw transfer]




GS2_A_2(3EKK)

[Raw transfer]




VGH_A_2(2YFX)

[Raw transfer]




BMI_B_2(2OJ9)

[Raw transfer]




IFC_A_2(3DZQ)

[Raw transfer]




07J_B_7(3TT0)

[Raw transfer]




I3K_A_2(4FNY)

[Raw transfer]




GUI_A_2(2XB7)

[Raw transfer]




01P_B_6(3QQU)
IGF1R_HUMAN
[Raw transfer]




0VF_A_2(4FYO)

[Raw transfer]




VGH_A_2(4ANS)

[Raw transfer]




VGH_A_2(4ANQ)

[Raw transfer]




PD1_C_3(2FGI)

[Raw transfer]




01P_A_5(3QQU)
IGF1R_HUMAN
[Raw transfer]




ADP_A_3(3LCT)

[Raw transfer]




ACK_A_6(2IVS)
RET_HUMAN
[Raw transfer]




PD1_D_4(2FGI)
FGFR1_HUMAN
[Raw transfer]




ANP_A_5(2QOC)

[Raw transfer]




C07_A_2(4G2F)

[Raw transfer]




VGH_A_2(3ZBF)
?
[Raw transfer]




0US_A_2(4FOB)

[Raw transfer]




07J_A_3(3TT0)
FGFR1_HUMAN
[Raw transfer]




GS3_A_2(3EKN)

[Raw transfer]




01P_C_7(3QQU)
IGF1R_HUMAN
[Raw transfer]




P16_A_3(1OPK)
ABL1_MOUSE
[Raw transfer]




0UU_A_2(4FOC)

[Raw transfer]




PDR_A_5(3LVP)
IGF1R_HUMAN
[Raw transfer]




ANP_B_9(1JQH)
IGF1R_HUMAN
[Raw transfer]




DKI_A_2(3HMI)
ABL2_HUMAN
[Raw transfer]




VM1_A_3(3JS2)
FGFR1_HUMAN
[Raw transfer]




0UV_A_2(4FOD)

[Raw transfer]




EMH_A_2(3AOX)

[Raw transfer]




VM1_B_5(3JS2)

[Raw transfer]




CCX_B_7(3LW0)
IGF1R_HUMAN
[Raw transfer]




CCX_D_13(3LW0)

[Raw transfer]




CCX_C_10(3LW0)
IGF1R_HUMAN
[Raw transfer]




CCX_A_5(3LW0)
IGF1R_HUMAN
[Raw transfer]




EDO_B_8(4F64)

[Raw transfer]




EDO_B_7(4F63)

[Raw transfer]




EDO_A_4(3AOX)

[Raw transfer]




EDO_A_13(4BKJ)
?
[Raw transfer]




143 -100%-131 - C3 -U143 - -
144 -100%-130 - C3 -U144 - -
145 -100%-135 - C3 -U145 - -
146 -100%-124 - C3 -U146 - -
147 -100%-131 - C3 -U147 - -
148 -100%-130 - C3 -U148 - -
149 -100%-130 - C3 -U149 - -
150 -100%-130 - C3 -U150 - -
151 -100%-130 - C3 -U151 - -
152 -100%-138 - C3 -U152 - -
153 -100%-129 - C3 -U153 - -
154 -100%-131 - C3 -U154 - -
155 -100%-131 - C3 -U155 - -
156 -100%-131 - C3 -U156 - -
157 -100%-130 - C3 -U157 - -
158 -100%-117 - C3 -U158 - -
159 -98%-122 - C3 -U159 - -