@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PLK1_HUMAN: (2013-07-24 )
MSAAVTAGKLARAPADPGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPSNRKPLTVLNKGLENPLPERPREKEEPVVRETGEVVDCHLSDMLQQLHSVNASKPSERGLVRQEEAEDPACIPIFWVSKWVDYSDKYGLGYQLCDNSVGVLFNDSTRLILYNDGDSLQYIERDGTESYLTVSSHPNSLMKKITLLKYFRNYMSEHLLKAGANITPREGDELARLPYLRTWFRTRSAIILHLSNGSVQINFFQDHTKLILCPLMAAVTYIDEKRDFRTYRLSLLEEYGCCKELASRLRYARTMVDKLLSSRSASNRLKAS

Atome Classification :

(14 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_11(3FC2)
PLK1_HUMAN
[Raw transfer]




4FR_A_2(3DBE)
?
[Raw transfer]




IBI_A_2(3FC2)
PLK1_HUMAN
[Raw transfer]




1J4_A_4(4J53)
?
[Raw transfer]




5FR_A_2(3DBF)
?
[Raw transfer]




R78_A_3(2RKU)
PLK1_HUMAN
[Raw transfer]




2FR_A_2(3DBC)
?
[Raw transfer]




R78_A_3(2RKU)
PLK1_HUMAN
[Raw transfer]




626_A_5(2OWB)
PLK1_HUMAN
[Raw transfer]




1J3_A_2(4J52)
?
[Raw transfer]




626_A_5(2OWB)
PLK1_HUMAN
[Raw transfer]




3FR_A_2(3DBD)
?
[Raw transfer]




FRS_A_2(3DB6)
?
[Raw transfer]




ADP_A_2(3D5W)
?
[Raw transfer]




ANP_A_7(2OU7)
PLK1_HUMAN
[Raw transfer]




1FR_A_2(3DB8)
?
[Raw transfer]




KWT_A_2(3D5X)
?
[Raw transfer]




TAR_A_8(2RKU)
PLK1_HUMAN
[Raw transfer]




EDO_A_3(3FC2)
PLK1_HUMAN
[Raw transfer]




EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]




10 PsiBlast_PDB 89.4599%-127 - C2 -4J52 9.8 ?
2 PsiBlast_PDB 89.2399%-125 - C2 -2OU7 3.5 PLK1_HUMAN
11 PsiBlast_PDB 88.8499%-123 - C2 -4J53 9.2 ?
134 HHSearch 88.76100%-124 - C2 -2RKU 9.8 PLK1_HUMAN
123 HHSearch 88.7099%-125 - C2 -2OWB 8.2 PLK1_HUMAN
4 PsiBlast_PDB 88.5799%-124 - C2 -3FC2 8.4 PLK1_HUMAN
19 PsiBlast_PDB 81.4978%-121 - C2 -3DB6 8.0 ?
23 PsiBlast_CBE 81.3078%-128 - C2 -3DBF 8.0 ?
20 PsiBlast_PDB 81.0078%-121 - C2 -3D5X 4.2 ?
15 PsiBlast_PDB 80.6376%-131 - C2 -3DB8 7.6 ?
17 PsiBlast_PDB 80.6276%-130 - C2 -3DBD 8.5 ?
18 PsiBlast_PDB 80.4976%-122 - C2 -3D5W 5.3 ?
16 PsiBlast_PDB 79.1176%-128 - C2 -3DBC 7.5 ?
24 PsiBlast_CBE 79.0078%-118 - C2 -3DBE 7.5 ?