@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PLK3_HUMAN: (2013-07-24 )
MEPAAGFLSPRPFQRAAAAPAPPAGPGPPPSALRGPELEMLAGLPTSDPGRLITDPRSGRTYLKGRLLGKGGFARCYEATDTETGSAYAVKVIPQSRVAKPHQREKILNEIELHRDLQHRHIVRFSHHFEDADNIYIFLELCSRKSLAHIWKARHTLLEPEVRYYLRQILSGLKYLHQRGILHRDLKLGNFFITENMELKVGDFGLAARLEPPEQRKKTICGTPNYVAPEVLLRQGHGPEADVWSLGCVMYTLLCGSPPFETADLKETYRCIKQVHYTLPASLSLPARQLLAAILRASPRDRPSIDQILRHDFFTKGYTPDRLPISSCVTVPDLTPPNPARSLFAKVTKSLFGRKKKSKNHAQERDEVSGLVSGLMRTSVGHQDARPEAPAASGPAPVSLVETAPEDSSPRGTLASSGDGFEEGLTVATVVESALCALRNCIAFMPPAEQNPAPLAQPEPLVWVSKWVDYSNKFGFGYQLSSRRVAVLFNDGTHMALSANRKTVHYNPTSTKHFSFSVGAVPRALQPQLGILRYFASYMEQHLMKGGDLPSVEEVEVPAPPLLLQWVKTDQALLMLFSDGTVQVNFYGDHTKLILSGWEPLLVTFVARNRSACTYLASHLRQLGCSPDLRQRLRYALRLLRDRSPA

Atome Classification :

(18 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

664_A_4(4A4O)
PLK1_HUMAN
[Raw transfer]




2FR_A_2(3DBC)
?
[Raw transfer]




937_A_2(2YAC)
PLK1_HUMAN
[Raw transfer]




939_A_4(4A4L)
PLK1_HUMAN
[Raw transfer]




3FR_A_2(3DBD)
?
[Raw transfer]




R78_A_3(2RKU)
PLK1_HUMAN
[Raw transfer]




FRS_A_2(3DB6)
?
[Raw transfer]




626_A_5(2OWB)
PLK1_HUMAN
[Raw transfer]




4FR_A_2(3DBE)
?
[Raw transfer]




071_A_2(3KB7)
PLK1_HUMAN
[Raw transfer]




1J3_A_2(4J52)
?
[Raw transfer]




1J4_A_4(4J53)
?
[Raw transfer]




IBI_A_2(3FC2)
PLK1_HUMAN
[Raw transfer]




5FR_A_2(3DBF)
?
[Raw transfer]




ADP_A_2(3D5W)
?
[Raw transfer]




1FR_A_2(3DB8)
?
[Raw transfer]




ANP_A_7(2OU7)
PLK1_HUMAN
[Raw transfer]




GOL_A_11(3FC2)
PLK1_HUMAN
[Raw transfer]




KWT_A_2(3D5X)
?
[Raw transfer]




EDO_A_4(3FC2)
PLK1_HUMAN
[Raw transfer]




TAR_A_8(2RKU)
PLK1_HUMAN
[Raw transfer]




6 PsiBlast_PDB 90.9149%-122 - C1 -3DBD 9.0 ?
7 PsiBlast_PDB 90.6651%-115 - C1 -3DB6 7.5 ?
10 PsiBlast_PDB 90.4951%-123 - C1 -3DBF 7.6 ?
20 PsiBlast_PDB 90.3653%-114 - C1 -2RKU 9.4 PLK1_HUMAN
17 PsiBlast_PDB 90.1653%-116 - C1 -2OU7 3.5 PLK1_HUMAN
5 PsiBlast_PDB 89.6649%-120 - C1 -3DBC 7.6 ?
2 PsiBlast_PDB 89.4449%-111 - C1 -3D5W 5.2 ?
18 PsiBlast_PDB 89.1553%-115 - C1 -2OWB 8.1 PLK1_HUMAN
22 PsiBlast_CBE 89.0653%-116 - C1 -4J52 9.4 ?
4 PsiBlast_PDB 88.9349%-120 - C1 -3DB8 7.8 ?
14 PsiBlast_PDB 88.8052%-109 - C1 -4A4O 9.3 PLK1_HUMAN
21 PsiBlast_CBE 88.7453%-114 - C1 -4J53 9.0 ?
19 PsiBlast_PDB 88.5953%-112 - C1 -3FC2 7.9 PLK1_HUMAN
13 PsiBlast_PDB 87.8652%-110 - C1 -4A4L 9.1 PLK1_HUMAN
12 PsiBlast_PDB 86.9652%-111 - C1 -2YAC 9.4 PLK1_HUMAN
9 PsiBlast_PDB 86.7751%-112 - C1 -3DBE 7.6 ?
8 PsiBlast_PDB 86.4651%-109 - C1 -3D5X 4.2 ?
15 PsiBlast_PDB 85.6352%-109 - C1 -3KB7 8.9 PLK1_HUMAN