@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PLK4_HUMAN: (2013-07-24 )
MATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDLGTVEDSIDSGHATISTAITASSSTSISGSLFDKRRLLIGQPLPNKMTVFPKNKSSTDFSSSGDGNSFYTQWGNQETSNSGRGRVIQDAEERPHSRYLRRAYSSDRSGTSNSQSQAKTYTMERCHSAEMLSVSKRSGGGENEERYSPTDNNANIFNFFKEKTSSSSGSFERPDNNQALSNHLCPGKTPFPFADPTPQTETVQQWFGNLQINAHLRKTTEYDSISPNRDFQGHPDLQKDTSKNAWTDTKVKKNSDASDNAHSVKQQNTMKYMTALHSKPEIIQQECVFGSDPLSEQSKTRGMEPPWGYQNRTLRSITSPLVAHRLKPIRQKTKKAVVSILDSEEVCVELVKEYASQEYVKEVLQISSDGNTITIYYPNGGRGFPLADRPPSPTDNISRYSFDNLPEKYWRKYQYASRFVQLVRSKSPKITYFTRYAKCILMENSPGADFEVWFYDGVKIHKTEDFIQVIEKTGKSYTLKSESEVNSLKEEIKMYMDHANEGHRICLALESIISEEERKTRSAPFFPIIIGRKPGSTSSPKALSPPPSVDSNYPTRERASFNRMVMHSAASPTQAPILNPSMVTNEGLGLTTTASGTDISSNSLKDCLPKSAQLLKSVFVKNVGWATQLTSGAVWVQFNDGSQLVVQAGVSSISYTSPNGQTTRYGENEKLPDYIKQKLQCLSSILLMFSNPTPNFH

Atome Classification :

(61 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

0C0_A_2(3UO4)
AURKA_HUMAN
[Raw transfer]




AK3_A_2(3D2I)
AURKA_MOUSE
[Raw transfer]




NHI_A_5(4DEA)
AURKA_HUMAN
[Raw transfer]




0C9_A_2(3UP7)
AURKA_HUMAN
[Raw transfer]




0C3_A_2(3UOD)
AURKA_HUMAN
[Raw transfer]




NHU_A_2(4DED)
AURKA_HUMAN
[Raw transfer]




EML_A_3(3MYG)
AURKA_HUMAN
[Raw transfer]




0BX_A_2(3UO5)
AURKA_HUMAN
[Raw transfer]




NHJ_A_2(4DEB)
AURKA_HUMAN
[Raw transfer]




ADP_A_4(4DEE)
AURKA_HUMAN
[Raw transfer]




MMH_A_2(3FDN)
AURKA_HUMAN
[Raw transfer]




AK6_A_2(3DJ6)
AURKA_MOUSE
[Raw transfer]




0C8_A_2(3UP2)
AURKA_HUMAN
[Raw transfer]




AK1_A_2(3D14)
AURKA_MOUSE
[Raw transfer]




ZZL_A_2(2WTW)
AURKA_HUMAN
[Raw transfer]




0C5_A_3(3UOJ)
AURKA_HUMAN
[Raw transfer]




AK8_A_3(3EFW)
AURKA_HUMAN
[Raw transfer]




NRM_A_2(3NRM)
AURKA_HUMAN
[Raw transfer]




AK8_B_5(3EFW)
AURKA_HUMAN
[Raw transfer]




HPM_B_4(2C6E)
AURKA_HUMAN
[Raw transfer]




0C5_B_4(3UOJ)
AURKA_HUMAN
[Raw transfer]




0C4_A_3(3UOH)
AURKA_HUMAN
[Raw transfer]




CC3_E_5(2NP8)
AURKA_HUMAN
[Raw transfer]




VX6_A_2(4JBQ)
?
[Raw transfer]




97B_A_4(3H10)
AURKA_HUMAN
[Raw transfer]




WPH_A_2(4JBO)
?
[Raw transfer]




97B_D_6(3H10)
AURKA_HUMAN
[Raw transfer]




XU2_A_2(4JAI)
?
[Raw transfer]




AK7_A_2(3DJ7)
AURKA_MOUSE
[Raw transfer]




L0E_A_2(2W1E)
AURKA_HUMAN
[Raw transfer]




VEK_A_2(4B0G)
AURKA_HUMAN
[Raw transfer]




97B_B_5(3H10)
AURKA_HUMAN
[Raw transfer]




PFQ_A_2(3K5U)
AURKA_HUMAN
[Raw transfer]




0BZ_A_3(3UNZ)
AURKA_HUMAN
[Raw transfer]




P9J_A_2(3P9J)
AURKA_HUMAN
[Raw transfer]




XU1_A_2(4JAJ)
?
[Raw transfer]




HPM_A_3(2C6E)
AURKA_HUMAN
[Raw transfer]




0BZ_B_6(3UNZ)
AURKA_HUMAN
[Raw transfer]




0K6_B_6(4DHF)
AURKA_HUMAN
[Raw transfer]




ZZL_A_2(2X81)
AURKA_HUMAN
[Raw transfer]




0C4_B_7(3UOH)
AURKA_HUMAN
[Raw transfer]




ANP_A_7(3COK)
PLK4_HUMAN
[Raw transfer]




83H_A_3(3COH)
AURKA_HUMAN
[Raw transfer]




83H_B_4(3COH)
AURKA_HUMAN
[Raw transfer]




0C6_A_3(3UOK)
AURKA_HUMAN
[Raw transfer]




ANP_A_7(2OU7)
PLK1_HUMAN
[Raw transfer]




48B_A_2(3H0Y)
AURKA_HUMAN
[Raw transfer]




YM4_A_2(2X6E)
AURKA_HUMAN
[Raw transfer]




LJE_B_4(3O50)
AURKA_HUMAN
[Raw transfer]




0BY_B_6(3UO6)
AURKA_HUMAN
[Raw transfer]




LJE_A_3(3O50)
AURKA_HUMAN
[Raw transfer]




ANP_A_3(1O6L)
AKT2_HUMAN
[Raw transfer]




0BY_A_3(3UO6)
AURKA_HUMAN
[Raw transfer]




0C6_B_4(3UOK)
AURKA_HUMAN
[Raw transfer]




OFI_A_2(3LAU)
AURKA_HUMAN
[Raw transfer]




L0D_A_2(2W1D)
AURKA_HUMAN
[Raw transfer]




AK5_A_2(3DJ5)
AURKA_MOUSE
[Raw transfer]




ADN_B_2(1MUO)
AURKA_HUMAN
[Raw transfer]




KWT_A_2(3D5X)
?
[Raw transfer]




TAR_A_8(2RKU)
PLK1_HUMAN
[Raw transfer]




1 PsiBlast_PDB 85.9499%-136 - C2 -3COK 6.3 PLK4_HUMAN
87 PsiBlast_CBE 69.1037%-116 - C2 -3K5U 6.5 AURKA_HUMAN
88 PsiBlast_CBE 68.3037%-112 - C2 -3FDN 5.8 AURKA_HUMAN
76 PsiBlast_CBE 67.7838%-111 - C2 -3D14 8.1 AURKA_MOUSE
74 PsiBlast_CBE 67.2138%-117 - C2 -3D2I 8.1 AURKA_MOUSE
71 PsiBlast_CBE 66.8138%-113 - C2 -3DJ7 8.1 AURKA_MOUSE
63 PsiBlast_CBE 66.7637%-118 - C2 -2X81 7.7 AURKA_HUMAN
49 PsiBlast_CBE 66.4237%-111 - C2 -3UOD 6.3 AURKA_HUMAN
98 PsiBlast_CBE 66.2637%-117 - C2 -3H0Y 4.6 AURKA_HUMAN
33 PsiBlast_CBE 66.1737%-111 - C2 -4JAJ 4.9 ?
85 PsiBlast_CBE 65.9737%-113 - C2 -4JBQ 6.7 ?
40 PsiBlast_CBE 65.6837%-111 - C2 -3UP2 6.6 AURKA_HUMAN
52 PsiBlast_CBE 65.6737%-108 - C2 -3UO5 5.6 AURKA_HUMAN
62 PsiBlast_CBE 65.5937%-114 - C2 -3MYG 6.2 AURKA_HUMAN
91 PsiBlast_CBE 65.5437%-117 - C2 -3P9J 5.8 AURKA_HUMAN
82 PsiBlast_CBE 65.4137%-109 - C2 -2W1E 5.6 AURKA_HUMAN
83 PsiBlast_CBE 65.3937%-109 - C2 -2W1D 4.3 AURKA_HUMAN
53 PsiBlast_CBE 65.2637%-114 - C2 -3UO4 6.8 AURKA_HUMAN
21 PsiBlast_CBE 65.2037%-118 - C2 -3EFW 8.2 AURKA_HUMAN
35 PsiBlast_CBE 64.8937%-107 - C2 -4DEE 5.4 AURKA_HUMAN
38 PsiBlast_CBE 64.7637%-107 - C2 -4DEA 5.9 AURKA_HUMAN
72 PsiBlast_CBE 64.7138%-116 - C2 -3DJ6 9.9 AURKA_MOUSE
73 PsiBlast_CBE 64.6838%-118 - C2 -3DJ5 9.3 AURKA_MOUSE
100 PsiBlast_CBE 64.6637%-116 - C2 -3LAU 5.8 AURKA_HUMAN
101 PsiBlast_CBE 64.5037%-110 - C2 -4DHF 6.4 AURKA_HUMAN
25 PsiBlast_CBE 64.4737%-113 - C2 -4B0G 7.3 AURKA_HUMAN
37 PsiBlast_CBE 64.1837%-110 - C2 -4DEB 5.8 AURKA_HUMAN
79 PsiBlast_CBE 64.1637%-116 - C2 -3O50 7.1 AURKA_HUMAN
93 PsiBlast_CBE 64.1037%-105 - C2 -3H10 8.4 AURKA_HUMAN
22 PsiBlast_CBE 63.8837%-117 - C2 -3EFW 7.7 AURKA_HUMAN
92 PsiBlast_CBE 63.7437%-109 - C2 -3H10 8.4 AURKA_HUMAN
94 PsiBlast_CBE 63.6337%-103 - C2 -3H10 8.5 AURKA_HUMAN
36 PsiBlast_CBE 63.3437%-108 - C2 -4DED 5.8 AURKA_HUMAN
86 PsiBlast_CBE 63.3337%-101 - C2 -4JBO 9.1 ?
34 PsiBlast_CBE 63.3037%-112 - C2 -4JAI 8.1 ?
48 PsiBlast_CBE 63.2737%-102 - C2 -3UOH 5.5 AURKA_HUMAN
80 PsiBlast_CBE 62.9537%-106 - C2 -3NRM 6.1 AURKA_HUMAN
39 PsiBlast_CBE 62.9137%-109 - C2 -3UP7 6.4 AURKA_HUMAN
12 PsiBlast_PDB 62.8737%-109 - C2 -2WTW 7.3 AURKA_HUMAN
66 PsiBlast_CBE 62.8537%-112 - C2 -3COH 6.7 AURKA_HUMAN
89 PsiBlast_CBE 62.6937%-113 - C2 -2C6E 8.7 AURKA_HUMAN
67 PsiBlast_CBE 62.3637%-112 - C2 -3COH 6.6 AURKA_HUMAN
78 PsiBlast_CBE 62.3537%-115 - C2 -3O50 8.1 AURKA_HUMAN
46 PsiBlast_CBE 62.2437%-100 - C2 -3UOJ 4.7 AURKA_HUMAN
54 PsiBlast_CBE 62.0537%-101 - C2 -3UNZ 4.5 AURKA_HUMAN
47 PsiBlast_CBE 62.0537%-103 - C2 -3UOH 4.3 AURKA_HUMAN
55 PsiBlast_CBE 61.9637%-100 - C2 -3UNZ 4.5 AURKA_HUMAN
51 PsiBlast_CBE 61.5937%-100 - C2 -3UO6 5.0 AURKA_HUMAN
90 PsiBlast_CBE 61.5737%-114 - C2 -2C6E 8.4 AURKA_HUMAN
45 PsiBlast_CBE 61.5437%-100 - C2 -3UOJ 4.4 AURKA_HUMAN
131 HHSearch 61.0531%-103 - C2 -1O6L 5.3 AKT2_HUMAN
9 PsiBlast_PDB 60.9839%-109 - C2 -3D5X 2.8 ?
50 PsiBlast_CBE 60.9637%-101 - C2 -3UO6 5.1 AURKA_HUMAN
15 PsiBlast_PDB 60.9637%-113 - C2 -1MUO 3.2 AURKA_HUMAN
44 PsiBlast_CBE 60.9237% -98 - C2 -3UOK 4.4 AURKA_HUMAN
68 PsiBlast_CBE 60.7537%-109 - C2 -2RKU 2.7 PLK1_HUMAN
113 HHSearch 60.5431%-103 * C2 *4GV1 - AKT1_HUMAN
43 PsiBlast_CBE 60.2737% -97 - C2 -3UOK 4.9 AURKA_HUMAN
31 PsiBlast_CBE 59.6337%-112 - C2 -2OU7 3.3 PLK1_HUMAN
24 PsiBlast_CBE 58.8737%-107 - C2 -2X6E 7.1 AURKA_HUMAN
64 PsiBlast_CBE 41.8437% -82 - C2 -2NP8 6.8 AURKA_HUMAN