@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PTK6_HUMAN: (2013-07-24 )
MVSRDQAHLGPKYVGLWDFKSRTDEELSFRAGDVFHVARKEEQWWWATLLDEAGGAVAQGYVPHNYLAERETVESEPWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNEAVSFLSLPELVNYHRAQSLSHGLRLAAPCRKHEPEPLPHWDDWERPREEFTLCRKLGSGYFGEVFEGLWKDRVQVAIKVISRDNLLHQQMLQSEIQAMKKLRHKHILALYAVVSVGDPVYIITELMAKGSLLELLRDSDEKVLPVSELLDIAWQVAEGMCYLESQNYIHRDLAARNILVGENTLCKVGDFGLARLIKEDVYLSHDHNIPYKWTAPEALSRGHYSTKSDVWSFGILLHEMFSRGQVPYPGMSNHEAFLRVDAGYRMPCPLECPPSVHKLMLTCWCRDPEQRPCFKALRERLSSFTSYENPT

Atome Classification :

(64 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PD5_A_3(3QLF)
SRC_CHICK
[Raw transfer]




KS1_B_4(3EN4)
SRC_CHICK
[Raw transfer]




PD5_A_3(3EL8)
SRC_CHICK
[Raw transfer]




KS5_B_3(3EN6)
SRC_CHICK
[Raw transfer]




AQM_B_4(3TZ8)
SRC_CHICK
[Raw transfer]




S03_D_4(1YOL)
SRC_HUMAN
[Raw transfer]




BK5_A_3(3UQF)
SRC_CHICK
[Raw transfer]




PD3_A_2(3EL7)
SRC_CHICK
[Raw transfer]




VSP_A_3(3SVV)
SRC_CHICK
[Raw transfer]




08L_A_9(3U4W)
SRC_CHICK
[Raw transfer]




BK5_B_4(3UQF)
SRC_CHICK
[Raw transfer]




S03_C_3(1YOL)
SRC_HUMAN
[Raw transfer]




KS1_A_3(3EN4)
SRC_CHICK
[Raw transfer]




G6G_B_5(3G6G)
SRC_CHICK
[Raw transfer]




STI_B_6(3OEZ)
SRC_CHICK
[Raw transfer]




IHH_C_7(3F6X)
SRC_CHICK
[Raw transfer]




AQB_B_4(3TZ7)
SRC_CHICK
[Raw transfer]




G6G_A_3(3G6G)
SRC_CHICK
[Raw transfer]




KS4_A_3(3EN5)
SRC_CHICK
[Raw transfer]




NG7_A_3(4AGW)
SRC_CHICK
[Raw transfer]




AMP_B_4(3DQX)
SRC_CHICK
[Raw transfer]




ABJ_A_3(3EN7)
SRC_CHICK
[Raw transfer]




IHH_B_6(3F6X)
SRC_CHICK
[Raw transfer]




AMP_A_3(3DQX)
SRC_CHICK
[Raw transfer]




PP1_B_2(1QCF)
HCK_HUMAN
[Raw transfer]




1BU_B_4(3F3V)
SRC_CHICK
[Raw transfer]




NG7_B_6(4AGW)
SRC_CHICK
[Raw transfer]




AQM_A_3(3TZ8)
SRC_CHICK
[Raw transfer]




IHH_D_8(3F6X)
SRC_CHICK
[Raw transfer]




1BU_B_4(3F3W)
SRC_CHICK
[Raw transfer]




STI_A_3(3OEZ)
SRC_CHICK
[Raw transfer]




AQU_A_3(3TZ9)
SRC_CHICK
[Raw transfer]




1BU_A_3(3F3W)
SRC_CHICK
[Raw transfer]




B5A_A_3(3UQG)
SRC_CHICK
[Raw transfer]




GOL_A_2(3L9P)

[Raw transfer]




1BU_A_3(3F3V)
SRC_CHICK
[Raw transfer]




AQU_B_4(3TZ9)
SRC_CHICK
[Raw transfer]




1N1_B_5(3G5D)
SRC_CHICK
[Raw transfer]




1N1_B_4(3QLG)
SRC_CHICK
[Raw transfer]




24A_D_4(2BDF)
SRC_HUMAN
[Raw transfer]




AQB_A_3(3TZ7)
SRC_CHICK
[Raw transfer]




08X_B_4(3U51)
SRC_CHICK
[Raw transfer]




1N1_A_3(3QLG)
SRC_CHICK
[Raw transfer]




07J_A_3(3TT0)
FGFR1_HUMAN
[Raw transfer]




H8H_A_2(2H8H)
SRC_HUMAN
[Raw transfer]




STU_B_3(3D7T)
SRC_CHICK
[Raw transfer]




24A_C_3(2BDF)
SRC_HUMAN
[Raw transfer]




SR2_A_3(2QLQ)
SRC_CHICK
[Raw transfer]




V4Z_A_4(4AOJ)
NTRK1_HUMAN
[Raw transfer]




1BQ_A_2(4I4E)

[Raw transfer]




B5A_B_4(3UQG)
SRC_CHICK
[Raw transfer]




RBS_A_3(2HWO)
SRC_CHICK
[Raw transfer]




P01_A_3(1YOM)
SRC_HUMAN
[Raw transfer]




P16_A_3(1OPK)
ABL1_MOUSE
[Raw transfer]




08X_A_3(3U51)
SRC_CHICK
[Raw transfer]




P01_B_4(1YOM)
SRC_HUMAN
[Raw transfer]




4ST_A_2(2J0J)
FAK1_CHICK
[Raw transfer]




1AW_A_3(3F3U)
SRC_CHICK
[Raw transfer]




SR2_B_5(2QLQ)
SRC_CHICK
[Raw transfer]




RBS_B_4(2HWO)
SRC_CHICK
[Raw transfer]




1AW_B_5(3F3U)
SRC_CHICK
[Raw transfer]




1AU_A_3(3F3T)
SRC_CHICK
[Raw transfer]




HET_B_2(2BDJ)
SRC_HUMAN
[Raw transfer]




DJK_B_4(2HWP)
SRC_CHICK
[Raw transfer]




MES_A_4(4AGW)
SRC_CHICK
[Raw transfer]




MES_B_7(4AGW)
SRC_CHICK
[Raw transfer]




111 HHSearch 84.7447%-106 - C3 -2H8H 8.1 SRC_HUMAN
113 HHSearch 80.5042%-106 - C3 -1QCF 6.7 HCK_HUMAN
114 HHSearch 76.3337%-108 - C3 -1OPK 9.4 ABL1_MOUSE
76 PsiBlast_CBE 73.1952%-119 - C3 -3U4W 10.9 SRC_CHICK
47 PsiBlast_CBE 71.7952%-120 - C3 -3UQG 4.0 SRC_CHICK
66 PsiBlast_CBE 71.1452%-118 - C3 -2BDJ 9.1 SRC_HUMAN
95 PsiBlast_CBE 70.7151%-120 - C3 -1YOL 6.1 SRC_HUMAN
90 PsiBlast_CBE 70.4252%-129 - C3 -2QLQ 6.3 SRC_CHICK
58 PsiBlast_CBE 70.2452%-120 - C3 -3EN4 6.6 SRC_CHICK
49 PsiBlast_CBE 70.1652%-121 - C3 -3UQF 7.1 SRC_CHICK
62 PsiBlast_CBE 69.8852%-117 - C3 -3DQX 4.1 SRC_CHICK
45 PsiBlast_CBE 69.6052%-118 - C3 -4AGW 8.2 SRC_CHICK
56 PsiBlast_CBE 69.4552%-132 - C3 -3EN6 6.2 SRC_CHICK
94 PsiBlast_CBE 68.8752%-114 - C3 -3SVV 5.6 SRC_CHICK
79 PsiBlast_CBE 68.8652%-121 - C3 -3TZ8 11.4 SRC_CHICK
93 PsiBlast_CBE 68.6252%-120 - C3 -2HWO 4.8 SRC_CHICK
67 PsiBlast_CBE 68.6152%-117 - C3 -2BDF 7.0 SRC_HUMAN
55 PsiBlast_CBE 68.3552%-128 - C3 -3EN7 5.5 SRC_CHICK
69 PsiBlast_CBE 67.9552%-118 - C3 -3QLG 7.6 SRC_CHICK
46 PsiBlast_CBE 67.8852%-120 - C3 -3UQG 4.2 SRC_CHICK
75 PsiBlast_CBE 67.8752%-121 - C3 -3U51 8.3 SRC_CHICK
44 PsiBlast_CBE 67.8452%-118 - C3 -4AGW 7.7 SRC_CHICK
83 PsiBlast_CBE 67.5352%-120 - C3 -3G5D 6.3 SRC_CHICK
63 PsiBlast_CBE 67.4452%-112 - C3 -3DQX 4.3 SRC_CHICK
98 PsiBlast_CBE 67.3551%-116 - C3 -3F3W 9.8 SRC_CHICK
59 PsiBlast_CBE 67.1952%-119 - C3 -3EN4 6.5 SRC_CHICK
48 PsiBlast_CBE 67.0952%-119 - C3 -3UQF 7.8 SRC_CHICK
70 PsiBlast_CBE 67.0352%-120 - C3 -3QLG 7.5 SRC_CHICK
74 PsiBlast_CBE 66.8852%-120 - C3 -3U51 8.6 SRC_CHICK
68 PsiBlast_CBE 66.6852%-116 - C3 -2BDF 7.6 SRC_HUMAN
54 PsiBlast_CBE 66.5152%-118 - C3 -3F6X 6.5 SRC_CHICK
85 PsiBlast_CBE 65.8452%-119 - C3 -3F3V 9.5 SRC_CHICK
96 PsiBlast_CBE 65.8151%-116 - C3 -1YOL 6.4 SRC_HUMAN
78 PsiBlast_CBE 65.7752%-119 - C3 -3TZ9 9.6 SRC_CHICK
89 PsiBlast_CBE 65.7652%-116 - C3 -2QLQ 3.2 SRC_CHICK
82 PsiBlast_CBE 65.7052%-117 - C3 -3TZ7 8.1 SRC_CHICK
80 PsiBlast_CBE 65.4652%-121 - C3 -3TZ8 10.6 SRC_CHICK
73 PsiBlast_CBE 65.3552%-117 - C3 -3OEZ 8.9 SRC_CHICK
52 PsiBlast_CBE 65.3052%-114 - C3 -3F6X 6.6 SRC_CHICK
72 PsiBlast_CBE 65.2252%-114 - C3 -3OEZ 8.4 SRC_CHICK
61 PsiBlast_CBE 65.0252%-115 - C3 -3EL7 9.1 SRC_CHICK
53 PsiBlast_CBE 64.9752%-114 - C3 -3F6X 7.1 SRC_CHICK
57 PsiBlast_CBE 64.6552%-119 - C3 -3EN5 6.1 SRC_CHICK
50 PsiBlast_CBE 64.6352%-116 - C3 -3G6G 12.4 SRC_CHICK
71 PsiBlast_CBE 64.5552%-120 - C3 -3QLF 7.6 SRC_CHICK
81 PsiBlast_CBE 64.4652%-120 - C3 -3TZ7 8.6 SRC_CHICK
88 PsiBlast_CBE 64.3352%-116 - C3 -3F3T 8.2 SRC_CHICK
77 PsiBlast_CBE 64.2252%-120 - C3 -3TZ9 8.7 SRC_CHICK
84 PsiBlast_CBE 63.9752%-117 - C3 -3F3V 9.6 SRC_CHICK
87 PsiBlast_CBE 63.7452%-116 - C3 -3F3U 6.8 SRC_CHICK
97 PsiBlast_CBE 63.6651%-119 - C3 -3F3W 9.5 SRC_CHICK
51 PsiBlast_CBE 62.5752%-115 - C3 -3G6G 11.9 SRC_CHICK
91 PsiBlast_CBE 62.4852%-119 - C3 -2HWP 1.8 SRC_CHICK
60 PsiBlast_CBE 62.4052%-116 - C3 -3EL8 6.9 SRC_CHICK
130 HHSearch 62.3136%-115 - C3 -2J0J 5.6 FAK1_CHICK
92 PsiBlast_CBE 62.1252%-119 - C3 -2HWO 3.0 SRC_CHICK
132 HHSearch 61.5842%-110 - C3 -3TT0 7.3 FGFR1_HUMAN
86 PsiBlast_CBE 61.5352%-116 - C3 -3F3U 6.2 SRC_CHICK
122 HHSearch 61.0236%-117 - C3 -4I4E 5.9
120 HHSearch 60.5436%-113 * C3 *4AOJ 7.1 NTRK1_HUMAN
64 PsiBlast_CBE 60.4352%-115 - C3 -3D7T 8.3 SRC_CHICK
100 PsiBlast_CBE 59.5551%-114 - C3 -1YOM 6.4 SRC_HUMAN
133 HHSearch 58.5041%-101 - C3 -3L9P 2.6
99 PsiBlast_CBE 57.3051%-116 - C3 -1YOM 5.8 SRC_HUMAN


Add PDB User Result:

(17 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PD5_A_3(3QLF)
SRC_CHICK
[Raw transfer]




KS1_B_4(3EN4)
SRC_CHICK
[Raw transfer]




PD5_A_3(3EL8)
SRC_CHICK
[Raw transfer]




KS5_B_3(3EN6)
SRC_CHICK
[Raw transfer]




AQM_B_4(3TZ8)
SRC_CHICK
[Raw transfer]




S03_D_4(1YOL)
SRC_HUMAN
[Raw transfer]




BK5_A_3(3UQF)
SRC_CHICK
[Raw transfer]




PD3_A_2(3EL7)
SRC_CHICK
[Raw transfer]




VSP_A_3(3SVV)
SRC_CHICK
[Raw transfer]




08L_A_9(3U4W)
SRC_CHICK
[Raw transfer]




BK5_B_4(3UQF)
SRC_CHICK
[Raw transfer]




S03_C_3(1YOL)
SRC_HUMAN
[Raw transfer]




KS1_A_3(3EN4)
SRC_CHICK
[Raw transfer]




G6G_B_5(3G6G)
SRC_CHICK
[Raw transfer]




STI_B_6(3OEZ)
SRC_CHICK
[Raw transfer]




IHH_C_7(3F6X)
SRC_CHICK
[Raw transfer]




AQB_B_4(3TZ7)
SRC_CHICK
[Raw transfer]




G6G_A_3(3G6G)
SRC_CHICK
[Raw transfer]




KS4_A_3(3EN5)
SRC_CHICK
[Raw transfer]




NG7_A_3(4AGW)
SRC_CHICK
[Raw transfer]




AMP_B_4(3DQX)
SRC_CHICK
[Raw transfer]




ABJ_A_3(3EN7)
SRC_CHICK
[Raw transfer]




IHH_B_6(3F6X)
SRC_CHICK
[Raw transfer]




AMP_A_3(3DQX)
SRC_CHICK
[Raw transfer]




PP1_B_2(1QCF)
HCK_HUMAN
[Raw transfer]




1BU_B_4(3F3V)
SRC_CHICK
[Raw transfer]




NG7_B_6(4AGW)
SRC_CHICK
[Raw transfer]




AQM_A_3(3TZ8)
SRC_CHICK
[Raw transfer]




IHH_D_8(3F6X)
SRC_CHICK
[Raw transfer]




1BU_B_4(3F3W)
SRC_CHICK
[Raw transfer]




STI_A_3(3OEZ)
SRC_CHICK
[Raw transfer]




AQU_A_3(3TZ9)
SRC_CHICK
[Raw transfer]




1BU_A_3(3F3W)
SRC_CHICK
[Raw transfer]




B5A_A_3(3UQG)
SRC_CHICK
[Raw transfer]




GOL_A_2(3L9P)

[Raw transfer]




1BU_A_3(3F3V)
SRC_CHICK
[Raw transfer]




AQU_B_4(3TZ9)
SRC_CHICK
[Raw transfer]




1N1_B_5(3G5D)
SRC_CHICK
[Raw transfer]




1N1_B_4(3QLG)
SRC_CHICK
[Raw transfer]




24A_D_4(2BDF)
SRC_HUMAN
[Raw transfer]




AQB_A_3(3TZ7)
SRC_CHICK
[Raw transfer]




08X_B_4(3U51)
SRC_CHICK
[Raw transfer]




1N1_A_3(3QLG)
SRC_CHICK
[Raw transfer]




07J_A_3(3TT0)
FGFR1_HUMAN
[Raw transfer]




H8H_A_2(2H8H)
SRC_HUMAN
[Raw transfer]




STU_B_3(3D7T)
SRC_CHICK
[Raw transfer]




24A_C_3(2BDF)
SRC_HUMAN
[Raw transfer]




SR2_A_3(2QLQ)
SRC_CHICK
[Raw transfer]




V4Z_A_4(4AOJ)
NTRK1_HUMAN
[Raw transfer]




1BQ_A_2(4I4E)

[Raw transfer]




B5A_B_4(3UQG)
SRC_CHICK
[Raw transfer]




RBS_A_3(2HWO)
SRC_CHICK
[Raw transfer]




P01_A_3(1YOM)
SRC_HUMAN
[Raw transfer]




P16_A_3(1OPK)
ABL1_MOUSE
[Raw transfer]




08X_A_3(3U51)
SRC_CHICK
[Raw transfer]




P01_B_4(1YOM)
SRC_HUMAN
[Raw transfer]




4ST_A_2(2J0J)
FAK1_CHICK
[Raw transfer]




1AW_A_3(3F3U)
SRC_CHICK
[Raw transfer]




SR2_B_5(2QLQ)
SRC_CHICK
[Raw transfer]




RBS_B_4(2HWO)
SRC_CHICK
[Raw transfer]




1AW_B_5(3F3U)
SRC_CHICK
[Raw transfer]




1AU_A_3(3F3T)
SRC_CHICK
[Raw transfer]




HET_B_2(2BDJ)
SRC_HUMAN
[Raw transfer]




DJK_B_4(2HWP)
SRC_CHICK
[Raw transfer]




MES_A_4(4AGW)
SRC_CHICK
[Raw transfer]




MES_B_7(4AGW)
SRC_CHICK
[Raw transfer]




134 -99%-117 - C3 -U134 - -
135 -100%-131 - C3 -U135 - -
136 -100%-125 - C3 -U136 - -
137 -100%-124 - C3 -U137 - -
138 -100%-125 - C3 -U138 - -
139 -99%-123 - C3 -U139 - -
140 -99%-117 - C3 -U140 - -
141 -100%-141 - C3 -U141 - -
142 -100%-124 - C3 -U142 - -
143 -100%-131 - C3 -U143 - -
144 -100%-141 - C3 -U144 - -
145 -100%-124 - C3 -U145 - -
146 -99%-130 - C3 -U146 - -
147 -100%-126 - C3 -U147 - -
148 -100%-126 - C3 -U148 - -
149 -100%-125 - C3 -U149 - -
150 -100%-141 - C3 -U150 - -