@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : TOPK_HUMAN: (2015-06-18 )
MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMTLSIPHINLSNDDDDEDKTFDESDFDDEAYYAALGTRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

046_A_2(3UGC)

[Raw transfer]
41 HHSearch 75.7323% -84 - C1 -4G3F - -
50 HHSearch 75.1125% -59 - C1 -3Q4U - ACVR1_HUMAN -
31 HHSearch 75.0622% -73 - C1 -4GT4 - ROR2_HUMAN -
46 HHSearch 74.7622% -71 - C1 -4FIE - PAK4_HUMAN -
33 HHSearch 73.6522% -77 * C1 *4AOJ - NTRK1_HUMAN -
22 Fugue 72.7324% -86 - C1 -1BYG - CSK_HUMAN -
35 HHSearch 72.4523% -75 - C1 -4HZS - ACK1_HUMAN -
34 HHSearch 72.4323% -79 - C1 -4HZR - ACK1_HUMAN -
12 PsiBlast_PDB 72.2224% -78 - C1 -2WQM - NEK7_HUMAN -
25 Fugue 72.0521% -69 - C1 -4DN5 - M3K14_HUMAN -
32 HHSearch 71.5122% -77 - C1 -3OMV - RAF1_HUMAN -
42 HHSearch 71.4125% -88 - C1 -4G31 - -
13 PsiBlast_PDB 71.3724% -74 - C1 -2WQN - NEK7_HUMAN -
36 HHSearch 70.0222% -69 - C1 -4FYO - -
6 PsiBlast_PDB 69.1429% -92 - C1 -2EVA - M3K7_HUMAN -
9 PsiBlast_PDB 68.7226% -92 - C1 -3OS3 - MP2K1_HUMAN -
43 HHSearch 68.3221% -84 - C1 -3HYH - SNF1_YEAST -
3 PsiBlast_PDB 67.4329% -99 - C1 -4L3P - M3K7_HUMAN -
8 PsiBlast_PDB 65.4726% -83 - C1 -3ORN - MP2K1_HUMAN -
4 PsiBlast_PDB 64.8529% -98 - C1 -4L52 - M3K7_HUMAN -