@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : AAPK1_HUMAN: (2015-10-02 )
MRRLSSWRKMATAEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLYNRNHQDPLAVAYHLIIDNRRIMNEAKDFYLATSPPDSFLDDHHLTRPHPERVPFLVAETPRARHTLDELNPQKSKHQGVRKAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTYSKMSLQLYQVDSRTYLLDFRSIDDEITEAKSGTATPQRSGSVSNYRSCQRSDSDAEAQGKSSEVSLTSSVTSLDSSPVDLTPRPGSHTIEFFEMCANLIKILAQ

Atome Classification :

(83 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

STU_A_5(4CFH)
AAPK1_RAT
[Raw transfer]




STU_A_4(4QFG)
AAPK1_RAT
[Raw transfer]




STU_A_4(4QFS)
AAPK1_RAT
[Raw transfer]




STU_A_4(4QFR)
?
[Raw transfer]




82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]




2PY_C_3(2OH0)
KAPCA_BOVIN
[Raw transfer]




STU_A_4(4REW)
AAPK1_HUMAN
[Raw transfer]




2EA_C_3(2F7E)
KAPCA_BOVIN
[Raw transfer]




4PY_C_3(2OJF)
KAPCA_BOVIN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




4EA_C_3(2F7X)
KAPCA_BOVIN
[Raw transfer]




STU_A_4(4RER)
AAPK1_HUMAN
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




6EA_C_3(2F7Z)
KAPCA_BOVIN
[Raw transfer]




STU_A_7(1NXK)
MAPK2_HUMAN
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




B49_A_5(2Y7J)
PHKG2_HUMAN
[Raw transfer]




YEX_A_9(2YEX)
CHK1_HUMAN
[Raw transfer]




S25_A_3(3TKI)
CHK1_HUMAN
[Raw transfer]




B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]




B49_D_8(2Y7J)
PHKG2_HUMAN
[Raw transfer]




TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]




CPS_B_10(4CZU)
CIPKN_ARATH
[Raw transfer]




CPS_C_16(4CZU)
CIPKN_ARATH
[Raw transfer]




2 PsiBlast_PDB 91.7798%-122 - C4 -4RER 9.0 AAPK1_HUMAN
4 PsiBlast_PDB 88.3489%-124 - C4 -4QFR 9.3 ?
3 PsiBlast_PDB 87.3689%-121 - C4 -4QFG 8.5 AAPK1_RAT
5 PsiBlast_PDB 86.9989%-123 - C4 -4QFS 8.9 AAPK1_RAT
1 PsiBlast_PDB 86.0199%-109 - C4 -4REW 8.9 AAPK1_HUMAN
6 PsiBlast_PDB 81.9198%-121 - C4 -4CFH 8.3 AAPK1_RAT
12 PsiBlast_PDB 69.6390%-115 - C4 -3AQV 8.2 AAPK2_HUMAN
124 HHSearch 58.9943% -99 - C4 -4BKY 7.9 MELK_HUMAN
36 PsiBlast_CBE 55.5348%-104 - C4 -4CQG - MELK_MOUSE -
26 PsiBlast_CBE 55.2845% -97 - C4 -4CZU - CIPKN_ARATH -
17 PsiBlast_PDB 55.0645%-100 - C4 -4CZU - CIPKN_ARATH -
23 PsiBlast_CBE 54.4445% -94 - C4 -4CZT - CIPKN_ARATH -
127 HHSearch 53.9338%-108 - C4 -4GV1 - AKT1_HUMAN -
27 PsiBlast_CBE 53.6045%-100 - C4 -4CZU 5.3 CIPKN_ARATH
24 PsiBlast_CBE 53.5845%-101 - C4 -4CZT - CIPKN_ARATH -
28 PsiBlast_CBE 53.2845% -96 - C4 -4CZU 5.8 CIPKN_ARATH
96 PsiBlast_CBE 53.1937%-102 - C4 -3IGO - ? -
16 PsiBlast_PDB 52.6345% -96 - C4 -4CZT - CIPKN_ARATH -
25 PsiBlast_CBE 52.3045% -97 - C4 -4CZT - CIPKN_ARATH -
93 PsiBlast_CBE 52.1937% -97 - C4 -4Y5Q - ? -
35 PsiBlast_CBE 52.1746% -94 - C4 -4BKY - MELK_HUMAN -
86 PsiBlast_CBE 52.0237%-111 - C4 -4FG8 - KCC1A_HUMAN -
34 PsiBlast_CBE 52.0246% -93 - C4 -4BKZ - MELK_HUMAN -
95 PsiBlast_CBE 51.9937% -99 - C4 -3MWU - ? -
61 PsiBlast_CBE 51.9035%-105 - C4 -3HX4 - ? -
132 HHSearch 51.6132% -99 - C4 -4C2V - AUKBA_XENLA -
92 PsiBlast_CBE 51.5537% -96 - C4 -3MA6 4.1 ?
59 PsiBlast_CBE 51.4135% -92 - C4 -4IFG - ? -
94 PsiBlast_CBE 51.1737%-104 - C4 -3NCG - ? -
138 HHSearch 51.0733% -93 - C4 -3C0I - CSKP_HUMAN -
77 PsiBlast_CBE 51.0135% -95 - C4 -3SX9 - ? -
60 PsiBlast_CBE 51.0035% -92 - C4 -3KU2 - ? -
71 PsiBlast_CBE 50.9135% -91 - C4 -3V51 - ? -
140 HHSearch 50.6934% -93 - C4 -1RDQ - KAPCA_MOUSE -
91 PsiBlast_CBE 50.6937% -93 - C4 -3MA6 5.5 ?
84 PsiBlast_CBE 50.6337%-109 - C4 -4FG9 - KCC1A_HUMAN -
74 PsiBlast_CBE 50.6035% -89 - C4 -3T3V - ? -
73 PsiBlast_CBE 50.5535% -91 - C4 -3UPX - ? -
65 PsiBlast_CBE 50.1935% -90 - C4 -4TZR - ? -
143 HHSearch 50.1631% -93 - C4 -2W5A - NEK2_HUMAN -
90 PsiBlast_CBE 49.7636%-103 - C4 -4MVF - CDPK2_PLAFK -
68 PsiBlast_CBE 49.7435% -90 - C4 -4JBV - ? -
144 HHSearch 49.6734% -93 - C4 -3TKI 7.2 CHK1_HUMAN
72 PsiBlast_CBE 49.6535% -94 - C4 -3UPZ - ? -
101 PsiBlast_CBE 49.6033% -90 - C4 -1CTP - KAPCA_PIG -
58 PsiBlast_CBE 49.5835% -90 - C4 -4IHP - ? -
33 PsiBlast_CBE 49.5046% -94 - C4 -4BL1 - MELK_HUMAN -
97 PsiBlast_CBE 49.4137% -92 - C4 -2WEI 6.7 ?
108 PsiBlast_CBE 49.3833% -84 - C4 -2F7Z 7.7 KAPCA_BOVIN
85 PsiBlast_CBE 49.3637%-103 - C4 -4FG8 - KCC1A_HUMAN -
109 PsiBlast_CBE 49.2633% -78 - C4 -2F7X 7.4 KAPCA_BOVIN
106 PsiBlast_CBE 49.2633% -81 - C4 -2OJF 6.5 KAPCA_BOVIN
87 PsiBlast_CBE 49.1935% -85 - C4 -4MXA - ? -
89 PsiBlast_CBE 48.9937%-105 - C4 -4FG7 4.5 KCC1A_HUMAN
70 PsiBlast_CBE 48.9535% -91 - C4 -3V5P - ? -
69 PsiBlast_CBE 48.9535% -90 - C4 -3V5T - ? -
63 PsiBlast_CBE 48.9435% -88 - C4 -4WG4 - ? -
111 PsiBlast_CBE 48.9237%-103 - C4 -2YIT - CHK2_HUMAN -
110 PsiBlast_CBE 48.9033% -82 - C4 -2F7E 7.2 KAPCA_BOVIN
64 PsiBlast_CBE 48.8335% -90 - C4 -4WG3 - ? -
103 PsiBlast_CBE 48.4437% -99 - C4 -2Y7J 6.2 PHKG2_HUMAN
104 PsiBlast_CBE 48.4137%-101 - C4 -2Y7J 5.9 PHKG2_HUMAN
133 HHSearch 48.1534% -92 - C4 -2Y0A - DAPK1_HUMAN -
76 PsiBlast_CBE 48.1135% -86 - C4 -3SXF - ? -
107 PsiBlast_CBE 48.1033% -81 - C4 -2OH0 7.1 KAPCA_BOVIN
56 PsiBlast_CBE 48.0536% -95 - C4 -2JC6 - KCC1D_HUMAN -
79 PsiBlast_CBE 47.8035% -90 - C4 -3I7B - ? -
88 PsiBlast_CBE 47.7935% -86 - C4 -4MX9 - ? -
78 PsiBlast_CBE 47.7735% -89 - C4 -3N51 - ? -
75 PsiBlast_CBE 47.4335% -90 - C4 -3T3U - ? -
57 PsiBlast_CBE 47.3936% -94 - C4 -2JC6 - KCC1D_HUMAN -
105 PsiBlast_CBE 47.2637%-102 - C4 -2Y7J 6.6 PHKG2_HUMAN
83 PsiBlast_CBE 47.1837%-105 - C4 -4FG9 - KCC1A_HUMAN -
134 HHSearch 47.1433% -94 - C4 -1XJD - -
67 PsiBlast_CBE 47.0035% -86 - C4 -4M84 - ? -
98 PsiBlast_CBE 46.6639%-105 - C4 -2W4O - KCC4_HUMAN -
100 PsiBlast_CBE 46.5739%-101 - C4 -2JAM - KCC1G_HUMAN -
99 PsiBlast_CBE 46.5539%-101 - C4 -2JAM - KCC1G_HUMAN -
66 PsiBlast_CBE 46.2235% -85 - C4 -4ONA - ? -
135 HHSearch 46.1536% -98 - C4 -3TXO - -
129 HHSearch 45.6734% -90 - C4 -2YEX 6.2 CHK1_HUMAN
62 PsiBlast_CBE 45.3635% -87 - C4 -4WG5 - ? -
142 HHSearch 41.6734% -79 - C4 -1NXK 8.3 MAPK2_HUMAN