@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : AAPK2_HUMAN: (2015-10-02 )
MAEKQKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPEDPSYDANVIDDEAVKEVCEKFECTESEVMNSLYSGDPQDQLAVAYHLIIDNRRIMNQASEFYLASSPPSGSFMDDSAMHIPPGLKPHPERMPPLIADSPKARCPLDALNTTKPKSLAVKKAKWHLGIRSQSKPYDIMAEVYRAMKQLDFEWKVVNAYHLRVRRKNPVTGNYVKMSLQLYLVDNRSYLLDFKSIDDEVVEQRSGSSTPQRSCSAAGLHRPRSSFDSTTAESHSLSGSLTGSLTGSTLSSVSPRLGSHTMDFFEMCASLITTLAR

Atome Classification :

(82 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

STU_A_4(4QFR)
?
[Raw transfer]




STU_A_5(4CFH)
AAPK1_RAT
[Raw transfer]




STU_A_4(4QFG)
AAPK1_RAT
[Raw transfer]




STU_A_4(4QFS)
AAPK1_RAT
[Raw transfer]




DRK_A_2(3F3Z)
?
[Raw transfer]




82B_A_2(4BKY)
MELK_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




STU_A_4(4REW)
AAPK1_HUMAN
[Raw transfer]




VGG_A_2(2WEI)
?
[Raw transfer]




STU_A_4(4RER)
AAPK1_HUMAN
[Raw transfer]




B49_A_5(2Y7J)
PHKG2_HUMAN
[Raw transfer]




B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]




B49_D_8(2Y7J)
PHKG2_HUMAN
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




YEX_A_9(2YEX)
CHK1_HUMAN
[Raw transfer]




DXR_A_3(3MA6)
?
[Raw transfer]




CPS_D_23(4CZT)
CIPKN_ARATH
[Raw transfer]




TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]




CPS_A_5(4CZT)
CIPKN_ARATH
[Raw transfer]




CPS_C_16(4CZT)
CIPKN_ARATH
[Raw transfer]




7 PsiBlast_PDB 85.0373%-133 - C4 -4QFS 8.9 AAPK1_RAT
6 PsiBlast_PDB 84.9173%-133 - C4 -4QFR 9.3 ?
5 PsiBlast_PDB 83.4773%-132 - C4 -4QFG 8.5 AAPK1_RAT
4 PsiBlast_PDB 82.0974%-126 - C4 -4RER 9.0 AAPK1_HUMAN
3 PsiBlast_PDB 76.3474%-115 - C4 -4REW 8.9 AAPK1_HUMAN
8 PsiBlast_PDB 75.4580%-127 - C4 -4CFH 8.3 AAPK1_RAT
12 PsiBlast_PDB 71.3599%-133 - C4 -3AQV 8.2 AAPK2_HUMAN
125 HHSearch 58.8543%-111 - C4 -4BKY 7.9 MELK_HUMAN
23 PsiBlast_CBE 56.5044%-108 - C4 -4CZT 4.9 CIPKN_ARATH
33 PsiBlast_CBE 56.1247%-121 - C4 -4CQG - MELK_MOUSE -
16 PsiBlast_PDB 55.5344%-107 - C4 -4CZT 4.2 CIPKN_ARATH
25 PsiBlast_CBE 55.1643%-109 - C4 -4CZU - CIPKN_ARATH -
94 PsiBlast_CBE 54.7836%-119 - C4 -3IGO - ? -
128 HHSearch 54.7338%-122 - C4 -4GV1 - AKT1_HUMAN -
24 PsiBlast_CBE 54.6844%-113 - C4 -4CZT 4.9 CIPKN_ARATH
50 PsiBlast_CBE 54.4338%-133 - C4 -2JC6 - KCC1D_HUMAN -
92 PsiBlast_CBE 54.3936%-120 - C4 -3NCG - ? -
82 PsiBlast_CBE 54.0738%-133 - C4 -4FG9 - KCC1A_HUMAN -
84 PsiBlast_CBE 53.8838%-134 - C4 -4FG8 - KCC1A_HUMAN -
51 PsiBlast_CBE 53.6938%-132 - C4 -2JC6 - KCC1D_HUMAN -
31 PsiBlast_CBE 53.6946%-113 - C4 -4BKZ - MELK_HUMAN -
93 PsiBlast_CBE 53.2036%-116 - C4 -3MWU - ? -
133 HHSearch 52.9131%-117 - C4 -4C2V - AUKBA_XENLA -
32 PsiBlast_CBE 52.7446%-114 - C4 -4BKY - MELK_HUMAN -
91 PsiBlast_CBE 52.7036%-114 - C4 -4Y5Q - ? -
143 HHSearch 52.5034%-108 - C4 -1RDQ - KAPCA_MOUSE -
98 PsiBlast_CBE 52.2138%-117 - C4 -3BHH - KCC2B_HUMAN -
86 PsiBlast_CBE 52.1536%-111 - C4 -3MA6 5.5 ?
87 PsiBlast_CBE 52.0636%-113 - C4 -3MA6 4.1 ?
30 PsiBlast_CBE 52.0046%-113 - C4 -4BL1 - MELK_HUMAN -
96 PsiBlast_CBE 51.5236%-108 - C4 -2WEI 6.7 ?
97 PsiBlast_CBE 51.3338%-117 - C4 -3BHH - KCC2B_HUMAN -
83 PsiBlast_CBE 51.2038%-124 - C4 -4FG8 - KCC1A_HUMAN -
106 PsiBlast_CBE 50.1136%-132 - C4 -4BDJ - CHK2_HUMAN -
110 PsiBlast_CBE 49.7836%-127 - C4 -4BDF - CHK2_HUMAN -
144 HHSearch 49.5732%-113 - C4 -2W5A - NEK2_HUMAN -
95 PsiBlast_CBE 49.3835%-115 - C4 -4MVF - CDPK2_PLAFK -
109 PsiBlast_CBE 49.2936%-125 - C4 -4BDG - CHK2_HUMAN -
104 PsiBlast_CBE 49.1836%-125 - C4 -2YCR - CHK2_HUMAN -
138 HHSearch 49.1635%-112 - C4 -3C0I - CSKP_HUMAN -
111 PsiBlast_CBE 48.8336%-130 - C4 -4BDE - CHK2_HUMAN -
105 PsiBlast_CBE 48.7936%-122 - C4 -4BDK - CHK2_HUMAN -
85 PsiBlast_CBE 48.7838%-126 - C4 -4FG7 4.5 KCC1A_HUMAN
108 PsiBlast_CBE 48.6836%-133 - C4 -4BDH - CHK2_HUMAN -
135 HHSearch 48.2634%-109 - C4 -2Y0A - DAPK1_HUMAN -
81 PsiBlast_CBE 48.2338%-127 - C4 -4FG9 - KCC1A_HUMAN -
101 PsiBlast_CBE 47.9837%-113 - C4 -2Y7J 6.2 PHKG2_HUMAN
145 HHSearch 47.9639%-113 - C4 -3F3Z 5.7 ?
136 HHSearch 47.9334%-111 - C4 -1XJD - -
134 HHSearch 47.9337%-115 - C4 -3TXO - -
107 PsiBlast_CBE 47.8136%-125 - C4 -4BDI - CHK2_HUMAN -
102 PsiBlast_CBE 47.5737%-114 - C4 -2Y7J 5.9 PHKG2_HUMAN
90 PsiBlast_CBE 47.3036%-122 - C4 -4QOX - CDPK4_PLAF7 -
103 PsiBlast_CBE 46.9937%-115 - C4 -2Y7J 6.6 PHKG2_HUMAN
89 PsiBlast_CBE 46.6939%-118 - C4 -2JAM - KCC1G_HUMAN -
88 PsiBlast_CBE 45.7739%-120 - C4 -2JAM - KCC1G_HUMAN -
80 PsiBlast_CBE 45.2132% -89 - C4 -4MX9 - ? -
54 PsiBlast_CBE 45.2132% -93 - C4 -4IFG - ? -
79 PsiBlast_CBE 45.0832% -87 - C4 -4MXA - ? -
53 PsiBlast_CBE 45.0132% -91 - C4 -4IHP - ? -
72 PsiBlast_CBE 44.8932% -91 - C4 -3T3V - ? -
52 PsiBlast_CBE 44.5532%-109 - C4 -3HX4 - ? -
130 HHSearch 44.4835%-104 - C4 -2YEX 6.3 CHK1_HUMAN
63 PsiBlast_CBE 44.2832% -91 - C4 -4TZR - ? -
55 PsiBlast_CBE 43.8232% -93 - C4 -3KU2 - ? -
69 PsiBlast_CBE 43.6732% -92 - C4 -3V51 - ? -
71 PsiBlast_CBE 43.6632% -90 - C4 -3UPX - ? -
75 PsiBlast_CBE 43.3032% -94 - C4 -3SX9 - ? -
142 HHSearch 43.2435%-110 - C4 -1NXK - MAPK2_HUMAN -
70 PsiBlast_CBE 43.1832% -94 - C4 -3UPZ - ? -
68 PsiBlast_CBE 43.1532% -92 - C4 -3V5P - ? -
66 PsiBlast_CBE 42.8232% -90 - C4 -4JBV - ? -
73 PsiBlast_CBE 42.7832% -93 - C4 -3T3U - ? -
65 PsiBlast_CBE 42.5632% -90 - C4 -4M84 - ? -
67 PsiBlast_CBE 42.4932% -92 - C4 -3V5T - ? -
74 PsiBlast_CBE 42.4732% -90 - C4 -3SXF - ? -
62 PsiBlast_CBE 42.4632% -90 - C4 -4WG3 - ? -
61 PsiBlast_CBE 42.2432% -90 - C4 -4WG4 - ? -
77 PsiBlast_CBE 41.9432% -93 - C4 -3I7B - ? -
60 PsiBlast_CBE 41.6932% -90 - C4 -4WG5 - ? -
64 PsiBlast_CBE 41.5532% -88 - C4 -4ONA - ? -
76 PsiBlast_CBE 41.4332% -91 - C4 -3N51 - ? -