@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : ARAF_HUMAN: (2015-10-03 )
MEPPRGPPANGAEPSRAVGTVKVYLPNKQRTVVTVRDGMSVYDSLDKALKVRGLNQDCCVVYRLIKGRKTVTAWDTAIAPLDGEELIVEVLEDVPLTMHNFVRKTFFSLAFCDFCLKFLFHGFRCQTCGYKFHQHCSSKVPTVCVDMSTNRQQFYHSVQDLSGGSRQHEAPSNRPLNELLTPQGPSPRTQHCDPEHFPFPAPANAPLQRIRSTSTPNVHMVSTTAPMDSNLIQLTGQSFSTDAAGSRGGSDGTPRGSPSPASVSSGRKSPHSKSPAEQRERKSLADDKKKVKNLGYRDSGYYWEVPPSEVQLLKRIGTGSFGTVFRGRWHGDVAVKVLKVSQPTAEQAQAFKNEMQVLRKTRHVNILLFMGFMTRPGFAIITQWCEGSSLYHHLHVADTRFDMVQLIDVARQTAQGMDYLHAKNIIHRDLKSNNIFLHEGLTVKIGDFGLATVKTRWSGAQPLEQPSGSVLWMAAEVIRMQDPNPYSFQSDVYAYGVVLYELMTGSLPYSHIGCRDQIIFMVGRGYLSPDLSKISSNCPKAMRRLLSDCLKFQREERPLFPQILATIELLQRSLPKIERSASEPSLHRTQADELPACLLSAARLVP

Atome Classification :

(84 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

B0R_A_3(3TV6)
BRAF_HUMAN
[Raw transfer]




TV4_A_3(3TV4)
BRAF_HUMAN
[Raw transfer]




TV4_B_4(3TV4)

[Raw transfer]




RI8_A_3(4EHE)
BRAF_HUMAN
[Raw transfer]




T1Q_A_3(4E4X)
BRAF_HUMAN
[Raw transfer]




RI8_B_4(4EHE)

[Raw transfer]




0WP_B_4(4G9C)

[Raw transfer]




BR2_A_3(3SKC)
BRAF_HUMAN
[Raw transfer]




RI9_B_4(4EHG)

[Raw transfer]




RI9_A_3(4EHG)
BRAF_HUMAN
[Raw transfer]




B0R_B_4(3TV6)

[Raw transfer]




BR2_B_4(3SKC)

[Raw transfer]




L1E_A_4(3IDP)
BRAF_HUMAN
[Raw transfer]




L1E_B_3(3IDP)

[Raw transfer]




T1Q_B_4(4E4X)

[Raw transfer]




0WP_A_3(4G9C)
BRAF_HUMAN
[Raw transfer]




DFS_B_4(4MBJ)

[Raw transfer]




2VX_A_3(4PP7)
BRAF_HUMAN
[Raw transfer]




55J_B_4(5CT7)
?
[Raw transfer]




55J_A_3(5CT7)
?
[Raw transfer]




032_A_3(3OG7)
BRAF_HUMAN
[Raw transfer]




1SU_A_3(4KSP)
BRAF_HUMAN
[Raw transfer]




032_A_3(3OG7)
BRAF_HUMAN
[Raw transfer]




4Z5_A_3(5C9C)
?
[Raw transfer]




STI_A_2(4CSV)
?
[Raw transfer]




BAX_B_4(1UWH)

[Raw transfer]




FNI_A_3(3PPK)
BRAF_HUMAN
[Raw transfer]




2VX_B_4(4PP7)

[Raw transfer]




BAX_A_3(1UWH)
BRAF_HUMAN
[Raw transfer]




GOL_A_5(3KUL)
EPHA8_HUMAN
[Raw transfer]




STI_A_4(1T46)
?
[Raw transfer]




324_A_3(3C4C)
BRAF_HUMAN
[Raw transfer]




CQE_B_4(4CQE)
?
[Raw transfer]




STI_B_6(3OEZ)
SRC_CHICK
[Raw transfer]




STI_A_3(3OEZ)
SRC_CHICK
[Raw transfer]




B1E_B_4(4G9R)

[Raw transfer]




B1E_A_3(4G9R)
BRAF_HUMAN
[Raw transfer]




FNI_B_4(3PPK)

[Raw transfer]




CQE_A_3(4CQE)
?
[Raw transfer]




DFS_A_3(4MBJ)
BRAF_HUMAN
[Raw transfer]




FP4_B_4(3PRI)

[Raw transfer]




B96_C_7(4JVG)
BRAF_HUMAN
[Raw transfer]




324_B_4(3C4C)

[Raw transfer]




BAX_B_4(1UWJ)

[Raw transfer]




00J_A_2(2XIR)

[Raw transfer]




B96_D_8(4JVG)

[Raw transfer]




B96_A_6(4JVG)
BRAF_HUMAN
[Raw transfer]




BAX_A_3(1UWJ)
BRAF_HUMAN
[Raw transfer]




324_B_4(4WO5)

[Raw transfer]




B96_B_5(4JVG)
BRAF_HUMAN
[Raw transfer]




SM6_A_3(3PSB)
BRAF_HUMAN
[Raw transfer]




SM7_A_3(3PSD)
BRAF_HUMAN
[Raw transfer]




SM7_B_4(3PSD)

[Raw transfer]




SM6_B_4(3PSB)

[Raw transfer]




10Z_A_4(4H58)
BRAF_HUMAN
[Raw transfer]




FP4_A_3(3PRI)
BRAF_HUMAN
[Raw transfer]




831_A_3(3II5)
BRAF_HUMAN
[Raw transfer]




SM5_A_3(3D4Q)
BRAF_HUMAN
[Raw transfer]




SM5_B_4(3D4Q)

[Raw transfer]




831_B_6(3II5)

[Raw transfer]




FOI_B_4(3PPJ)

[Raw transfer]




29L_B_4(4MNF)

[Raw transfer]




29L_A_3(4MNF)
BRAF_HUMAN
[Raw transfer]




29L_A_3(4MNF)
BRAF_HUMAN
[Raw transfer]




FOI_A_3(3PPJ)
BRAF_HUMAN
[Raw transfer]




FP3_B_4(3PRF)

[Raw transfer]




ANP_B_2(2SRC)
SRC_HUMAN
[Raw transfer]




SM5_A_3(3OMV)
RAF1_HUMAN
[Raw transfer]




PD5_A_3(3QLF)
SRC_CHICK
[Raw transfer]




SM5_B_4(3OMV)

[Raw transfer]




RXT_A_3(4U5J)
SRC_CHICK
[Raw transfer]




RXT_B_4(4U5J)
SRC_CHICK
[Raw transfer]




FP3_A_3(3PRF)
BRAF_HUMAN
[Raw transfer]




QB4_A_2(4CLJ)

[Raw transfer]




734_A_3(4E26)
BRAF_HUMAN
[Raw transfer]




734_B_4(4E26)

[Raw transfer]




ADN_A_2(2EVA)
M3K7_HUMAN
[Raw transfer]




5CN_B_2(2I1M)

[Raw transfer]




STU_A_3(3P86)
CTR1_ARATH
[Raw transfer]




ATP_B_3(2Y4I)

[Raw transfer]




HET_B_2(2BDJ)
SRC_HUMAN
[Raw transfer]




ATP_B_3(2Y4I)

[Raw transfer]




ACP_A_2(4UEU)
?
[Raw transfer]




RSW_A_3(3Q4C)
BRAF_HUMAN
[Raw transfer]




51 PsiBlast_CBE 93.6575%-130 - C1 -5CT7 11.4 ?
50 PsiBlast_CBE 93.5675%-129 - C1 -4KSP 9.8 BRAF_HUMAN
52 PsiBlast_CBE 93.1775%-131 - C1 -5CT7 11.6 ?
55 PsiBlast_CBE 92.2276%-131 - C1 -4H58 7.5 BRAF_HUMAN
2 PsiBlast_PDB 91.8776%-129 - C1 -3OMV 4.4 RAF1_HUMAN
22 PsiBlast_CBE 91.7776%-133 - C1 -3OMV 6.5
41 PsiBlast_CBE 91.4974%-125 - C1 -3IDP 10.7
67 PsiBlast_CBE 91.4872%-127 - C1 -4CQE 11.7 ?
49 PsiBlast_CBE 91.3174%-132 - C1 -4MBJ 5.1 BRAF_HUMAN
9 PsiBlast_PDB 90.9774%-129 - C1 -3Q4C 7.9 BRAF_HUMAN
14 PsiBlast_PDB 90.9674%-123 - C1 -4E26 5.1 BRAF_HUMAN
42 PsiBlast_CBE 90.9374%-127 - C1 -3IDP 10.8 BRAF_HUMAN
66 PsiBlast_CBE 90.8372%-125 - C1 -4CQE 11.4 ?
112 HHSearch 90.7374%-128 - C1 -4MNF 7.4 BRAF_HUMAN
12 PsiBlast_PDB 90.4474%-129 - C1 -3TV4 7.8 BRAF_HUMAN
1 PsiBlast_PDB 90.4173%-128 - C1 -4MNF 7.4 BRAF_HUMAN
16 PsiBlast_PDB 90.4074%-125 - C1 -4G9C 9.7 BRAF_HUMAN
21 PsiBlast_CBE 90.3673%-128 - C1 -4MNF 7.7
13 PsiBlast_PDB 90.1874%-128 - C1 -3TV6 8.4 BRAF_HUMAN
11 PsiBlast_PDB 90.1774%-128 - C1 -3SKC 8.6 BRAF_HUMAN
64 PsiBlast_CBE 90.0172%-126 - C1 -4WO5 3.0
15 PsiBlast_PDB 89.9974%-131 - C1 -4E4X 9.9 BRAF_HUMAN
37 PsiBlast_CBE 89.8474%-125 - C1 -3D4Q 6.6
46 PsiBlast_CBE 89.7173%-129 - C1 -4EHG 8.7
43 PsiBlast_CBE 89.6473%-128 - C1 -5C9C 9.9 ?
7 PsiBlast_PDB 89.5574%-129 - C1 -3PRF 8.3 BRAF_HUMAN
6 PsiBlast_PDB 89.5174%-130 - C1 -3PPK 9.0 BRAF_HUMAN
38 PsiBlast_CBE 89.4574%-131 - C1 -3II5 10.1
24 PsiBlast_CBE 89.4574%-127 - C1 -4G9C 9.9
27 PsiBlast_CBE 89.4474%-125 - C1 -4E26 3.7
19 PsiBlast_PDB 89.4174%-124 - C1 -3II5 10.4 BRAF_HUMAN
10 PsiBlast_PDB 89.3574%-128 - C1 -3PSD 8.3 BRAF_HUMAN
18 PsiBlast_PDB 89.2874%-127 - C1 -4PP7 9.1 BRAF_HUMAN
113 HHSearch 89.0772%-131 - C1 -3OG7 9.8 BRAF_HUMAN
4 PsiBlast_PDB 89.0674%-126 - C1 -3PSB 7.5 BRAF_HUMAN
25 PsiBlast_CBE 88.9874%-121 - C1 -4EHE 8.2
54 PsiBlast_CBE 88.9576%-128 - C1 -1UWH 9.1 BRAF_HUMAN
17 PsiBlast_PDB 88.8074%-127 - C1 -4EHE 8.0 BRAF_HUMAN
65 PsiBlast_CBE 88.7371%-131 - C1 -3OG7 9.8 BRAF_HUMAN
3 PsiBlast_PDB 88.6674%-124 - C1 -3D4Q 7.2 BRAF_HUMAN
60 PsiBlast_CBE 88.3872%-127 - C1 -4JVG 9.1 BRAF_HUMAN
34 PsiBlast_CBE 88.2674%-126 - C1 -3PRF 7.3
35 PsiBlast_CBE 88.1574%-127 - C1 -3PPK 8.4
31 PsiBlast_CBE 88.0174%-124 - C1 -3PSD 8.2
62 PsiBlast_CBE 87.9372%-127 - C1 -3C4C 6.1
29 PsiBlast_CBE 87.7874%-123 - C1 -3TV4 7.8
28 PsiBlast_CBE 87.7574%-124 - C1 -3TV6 8.6
36 PsiBlast_CBE 87.3674%-125 - C1 -3PPJ 7.4
32 PsiBlast_CBE 87.3174%-125 - C1 -3PSB 7.7
53 PsiBlast_CBE 87.1276%-127 - C1 -1UWH 9.0
44 PsiBlast_CBE 87.0673%-121 - C1 -4G9R 10.9
47 PsiBlast_CBE 87.0373%-126 - C1 -4EHG 7.7 BRAF_HUMAN
5 PsiBlast_PDB 86.9474%-125 - C1 -3PPJ 7.6 BRAF_HUMAN
58 PsiBlast_CBE 86.8472%-123 - C1 -4JVG 8.6
48 PsiBlast_CBE 86.7974%-122 - C1 -4MBJ 7.1
56 PsiBlast_CBE 86.7476%-119 - C1 -1UWJ 8.8
33 PsiBlast_CBE 86.5574%-124 - C1 -3PRI 7.7
8 PsiBlast_PDB 86.5474%-124 - C1 -3PRI 7.5 BRAF_HUMAN
30 PsiBlast_CBE 86.4874%-118 - C1 -3SKC 9.3
61 PsiBlast_CBE 86.3372%-124 - C1 -4JVG 8.4 BRAF_HUMAN
59 PsiBlast_CBE 86.1672%-123 - C1 -4JVG 8.4 BRAF_HUMAN
26 PsiBlast_CBE 85.9474%-122 - C1 -4E4X 9.5
23 PsiBlast_CBE 85.8974%-123 - C1 -4PP7 9.2
57 PsiBlast_CBE 85.6876%-121 - C1 -1UWJ 9.5 BRAF_HUMAN
63 PsiBlast_CBE 84.7372%-119 - C1 -3C4C 8.1 BRAF_HUMAN
45 PsiBlast_CBE 83.6473%-121 - C1 -4G9R 10.8 BRAF_HUMAN
118 HHSearch 70.9134%-109 - C1 -1T46 8.4 ?
69 PsiBlast_CBE 68.9234%-129 - C1 -3P86 5.6 CTR1_ARATH
131 HHSearch 67.5334%-118 - C1 -3KUL 3.0 EPHA8_HUMAN
124 HHSearch 66.1631%-114 - C1 -2EVA 3.9 M3K7_HUMAN
115 HHSearch 64.8738%-110 - C1 -2Y4I 4.9
72 PsiBlast_CBE 64.6334%-117 - C1 -4CSV 9.9 ?
119 HHSearch 63.7730%-106 - C1 -2XIR 7.1
68 PsiBlast_CBE 62.7536%-108 - C1 -2Y4I 4.9
95 PsiBlast_CBE 62.5132%-119 - C1 -3OEZ 9.1 SRC_CHICK
94 PsiBlast_CBE 62.3132%-115 - C1 -3OEZ 8.3 SRC_CHICK
93 PsiBlast_CBE 61.7532%-126 - C1 -3QLF 6.7 SRC_CHICK
127 HHSearch 61.0932%-104 - C1 -2I1M 4.3
128 HHSearch 61.0831%-108 - C1 -4CLJ 6.9
78 PsiBlast_CBE 60.7932%-120 - C1 -2BDJ 8.7 SRC_HUMAN
97 PsiBlast_CBE 59.8732%-118 - C1 -4U5J 4.3 SRC_CHICK
98 PsiBlast_CBE 59.7532%-122 - C1 -4U5J 4.8 SRC_CHICK
77 PsiBlast_CBE 59.3532%-115 - C1 -2SRC 5.1 SRC_HUMAN
71 PsiBlast_CBE 58.8534%-111 - C1 -4UEU 3.4 ?