@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : AVR2B_HUMAN: (2015-10-03 )
MTAPWVALALLWGSLCAGSGRGEAETRECIYYNANWELERTNQSGLERCEGEQDKRLHCYASWRNSSGTIELVKKGCWLDDFNCYDRQECVATEENPQVYFCCCEGNFCNERFTHLPEAGGPEVTYEPPPTAPTLLTVLAYSLLPIGGLSLIVLLAFWMYRHRKPPYGHVDIHEDPGPPPPSPLVGLKPLQLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLSAGCVEERVSLIRRSVNGTTSDCLVSLVTSVTNVDLPPKESSI

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GVD_B_10(3SOC)
AVR2A_HUMAN
[Raw transfer]




GVD_A_3(3SOC)
AVR2A_HUMAN
[Raw transfer]




LDN_B_13(3Q4U)
ACVR1_HUMAN
[Raw transfer]




QIG_A_2(3GXL)
TGFR1_HUMAN
[Raw transfer]




ZZG_A_2(2WOT)
TGFR1_HUMAN
[Raw transfer]




GVD_A_3(3SOC)
AVR2A_HUMAN
[Raw transfer]




LDN_C_6(3MDY)
BMR1B_HUMAN
[Raw transfer]




IYZ_A_4(4DYM)
ACVR1_HUMAN
[Raw transfer]




855_A_2(3HMM)
TGFR1_HUMAN
[Raw transfer]




GOL_A_6(4DYM)
ACVR1_HUMAN
[Raw transfer]




LDN_C_20(3Q4U)
ACVR1_HUMAN
[Raw transfer]




LDN_A_5(3MDY)
BMR1B_HUMAN
[Raw transfer]




TAK_B_17(3Q4T)
AVR2A_HUMAN
[Raw transfer]




LDN_A_5(3Q4U)
ACVR1_HUMAN
[Raw transfer]




TAK_A_3(3Q4T)
AVR2A_HUMAN
[Raw transfer]




LDN_A_5(3MDY)
BMR1B_HUMAN
[Raw transfer]




LDN_A_5(3Q4U)
ACVR1_HUMAN
[Raw transfer]




085_A_2(3TZM)
TGFR1_HUMAN
[Raw transfer]




PY1_C_3(1PY5)
TGFR1_HUMAN
[Raw transfer]




507_A_4(3OOM)
ACVR1_HUMAN
[Raw transfer]




GOL_A_8(4DYM)
ACVR1_HUMAN
[Raw transfer]




844_C_14(4BGG)
ACVR1_HUMAN
[Raw transfer]




844_B_10(4BGG)
ACVR1_HUMAN
[Raw transfer]




844_A_5(4BGG)
ACVR1_HUMAN
[Raw transfer]




3WN_A_2(4X2J)
TGFR1_HUMAN
[Raw transfer]




844_D_16(4BGG)
ACVR1_HUMAN
[Raw transfer]




ZZF_A_3(2WOU)
TGFR1_HUMAN
[Raw transfer]




3WO_A_2(4X2K)
TGFR1_HUMAN
[Raw transfer]




6OJ_A_3(4ASX)
AVR2A_HUMAN
[Raw transfer]




6OJ_B_8(4ASX)
AVR2A_HUMAN
[Raw transfer]




A3F_A_17(3MTF)
ACVR1_HUMAN
[Raw transfer]




TAK_A_10(4C02)
ACVR1_HUMAN
[Raw transfer]




3WK_A_2(4X2G)
?
[Raw transfer]




TAK_A_3(3H9R)
ACVR1_HUMAN
[Raw transfer]




580_B_2(1RW8)
TGFR1_HUMAN
[Raw transfer]




T12_A_7(2NRU)
IRAK4_HUMAN
[Raw transfer]




ADE_A_4(2QLU)
AVR2B_HUMAN
[Raw transfer]




3WA_A_2(4X0M)
TGFR1_HUMAN
[Raw transfer]




TRS_A_4(4X2G)
?
[Raw transfer]




EDO_A_10(3Q4U)
ACVR1_HUMAN
[Raw transfer]




1 PsiBlast_PDB 96.1498%-104 - C1 -2QLU 3.1 AVR2B_HUMAN
4 PsiBlast_PDB 88.8577%-102 - C1 -4ASX 5.7 AVR2A_HUMAN
22 PsiBlast_CBE 88.2377%-101 - C1 -3SOC 7.6 AVR2A_HUMAN
21 PsiBlast_CBE 88.1577%-100 - C1 -4ASX 5.7 AVR2A_HUMAN
23 PsiBlast_CBE 87.5977%-103 - C1 -3Q4T 7.0 AVR2A_HUMAN
2 PsiBlast_PDB 87.3777% -98 - C1 -3Q4T 7.6 AVR2A_HUMAN
3 PsiBlast_PDB 87.2777% -99 - C1 -3SOC 6.9 AVR2A_HUMAN
105 HHSearch 86.8375% -96 - C1 -3SOC 6.9 AVR2A_HUMAN
33 PsiBlast_CBE 77.8039% -97 - C1 -4X0M 3.5 TGFR1_HUMAN
12 PsiBlast_PDB 76.8539% -97 - C1 -4X2G 4.0 ?
32 PsiBlast_CBE 76.1539% -96 - C1 -4X2J 5.5 TGFR1_HUMAN
31 PsiBlast_CBE 76.1539% -96 - C1 -4X2K 5.5 TGFR1_HUMAN
6 PsiBlast_PDB 75.5239% -95 - C1 -2WOT 9.0 TGFR1_HUMAN
53 PsiBlast_CBE 75.4638% -86 - C1 -4BGG 7.1 ACVR1_HUMAN
20 PsiBlast_PDB 75.0238% -92 - C1 -3H9R 4.9 ACVR1_HUMAN
7 PsiBlast_PDB 74.6639% -96 - C1 -2WOU 6.6 TGFR1_HUMAN
62 PsiBlast_CBE 74.3838% -81 - C1 -3MTF 7.0 ACVR1_HUMAN
108 HHSearch 74.3638% -91 - C1 -3Q4U 8.6 ACVR1_HUMAN
13 PsiBlast_PDB 74.3439% -94 - C1 -1RW8 7.3 TGFR1_HUMAN
60 PsiBlast_CBE 74.1938% -85 - C1 -3OOM 6.7 ACVR1_HUMAN
8 PsiBlast_PDB 74.0839% -96 - C1 -3TZM 7.7 TGFR1_HUMAN
15 PsiBlast_PDB 73.6039% -98 - C1 -3HMM 8.3 TGFR1_HUMAN
52 PsiBlast_CBE 73.5938% -85 - C1 -4BGG 7.5 ACVR1_HUMAN
51 PsiBlast_CBE 73.5138% -89 - C1 -4C02 7.1 ACVR1_HUMAN
63 PsiBlast_CBE 73.4938% -85 - C1 -4DYM 6.4 ACVR1_HUMAN
14 PsiBlast_PDB 73.4439% -92 - C1 -3GXL 8.0 TGFR1_HUMAN
59 PsiBlast_CBE 73.3838% -84 - C1 -3Q4U 8.6 ACVR1_HUMAN
55 PsiBlast_CBE 73.3838% -83 - C1 -4BGG 7.1 ACVR1_HUMAN
54 PsiBlast_CBE 73.3338% -84 - C1 -4BGG 7.4 ACVR1_HUMAN
58 PsiBlast_CBE 73.2438% -86 - C1 -3Q4U 8.6 ACVR1_HUMAN
16 PsiBlast_PDB 73.0139% -95 - C1 -3MDY 8.5 BMR1B_HUMAN
107 HHSearch 72.4939% -93 * C1 *3MDY 8.5 BMR1B_HUMAN
57 PsiBlast_CBE 72.2038% -81 - C1 -3Q4U 8.7 ACVR1_HUMAN
5 PsiBlast_PDB 71.8339% -92 - C1 -1PY5 6.2 TGFR1_HUMAN
50 PsiBlast_CBE 71.7539% -95 - C1 -3MDY 8.1 BMR1B_HUMAN
118 HHSearch 64.5631% -96 - C1 -2NRU 4.4 IRAK4_HUMAN