@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : BMP2K_HUMAN: (2015-10-04 )
MKKFSRMPKSEGGSGGGAAGGGAGGAGAGAGCGSGGSSVGVRVFAVGRHQVTLEESLAEGGFSTVFLVRTHGGIRCALKRMYVNNMPDLNVCKREITIMKELSGHKNIVGYLDCAVNSISDNVWEVLILMEYCRAGQVVNQMNKKLQTGFTEPEVLQIFCDTCEAVARLHQCKTPIIHRDLKVENILLNDGGNYVLCDFGSATNKFLNPQKDGVNVVEEEIKKYTTLSYRAPEMINLYGGKPITTKADIWALGCLLYKLCFFTLPFGESQVAICDGNFTIPDNSRYSRNIHCLIRFMLEPDPEHRPDIFQVSYFAFKFAKKDCPVSNINNSSIPSALPEPMTASEAAARKSQIKARITDTIGPTETSIAPRQRPKANSATTATPSVLTIQSSATPVKVLAPGEFGNHRPKGALRPGNGPEILLGQGPPQQPPQQHRVLQQLQQGDWRLQQLHLQHRHPHQQQQQQQQQQQQQQQQQQQQQQQQQQQHHHHHHHHLLQDAYMQQYQHATQQQQMLQQQFLMHSVYQPQPSASQYPTMMPQYQQAFFQQQMLAQHQPSQQQASPEYLTSPQEFSPALVSYTSSLPAQVGTIMDSSYSANRSVADKEAIANFTNQKNISNPPDMSGWNPFGEDNFSKLTEEELLDREFDLLRSNRLEERASSDKNVDSLSAPHNHPPEDPFGSVPFISHSGSPEKKAEHSSINQENGTANPIKNGKTSPASKDQRTGKKTSVQGQVQKGNDESESDFESDPPSPKSSEEEEQDDEEVLQGEQGDFNDDDTEPENLGHRPLLMDSEDEEEEEKHSSDSDYEQAKAKYSDMSSVYRDRSGSGPTQDLNTILLTSAQLSSDVAVETPKQEFDVFGAVPFFAVRAQQPQQEKNEKNLPQHRFPAAGLEQEEFDVFTKAPFSKKVNVQECHAVGPEAHTIPGYPKSVDVFGSTPFQPFLTSTSKSESNEDLFGLVPFDEITGSQQQKVKQRSLQKLSSRQRRTKQDMSKSNGKRHHGTPTSTKKTLKPTYRTPERARRHKKVGRRDSQSSNEFLTISDSKENISVALTDGKDRGNVLQPEESLLDPFGAKPFHSPDLSWHPPHQGLSDIRADHNTVLPGRPRQNSLHGSFHSADVLKMDDFGAVPFTELVVQSITPHQSQQSQPVELDPFGAAPFPSKQ

Atome Classification :

(16 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3JW_A_4(4W9X)
BMP2K_HUMAN
[Raw transfer]




YDJ_A_2(4W9W)
BMP2K_HUMAN
[Raw transfer]




KSA_B_11(4WSQ)
AAK1_HUMAN
[Raw transfer]




KSA_A_7(4WSQ)
AAK1_HUMAN
[Raw transfer]




WI2_A_2(2XKE)
NEK2_HUMAN
[Raw transfer]




OL2_A_2(2XK4)
NEK2_HUMAN
[Raw transfer]




WCX_A_2(2XNP)
NEK2_HUMAN
[Raw transfer]




5R1_A_2(2XK8)
NEK2_HUMAN
[Raw transfer]




XK3_A_2(2XK3)
NEK2_HUMAN
[Raw transfer]




ED8_A_2(2XNO)
NEK2_HUMAN
[Raw transfer]




5Z5_A_2(2JAV)
NEK2_HUMAN
[Raw transfer]




EQH_A_2(2XK6)
NEK2_HUMAN
[Raw transfer]




STU_B_2(1BYG)
CSK_HUMAN
[Raw transfer]




BX7_A_3(4EUT)
TBK1_HUMAN
[Raw transfer]




SAP_A_2(2W5B)
NEK2_HUMAN
[Raw transfer]




430_A_2(2XNN)
NEK2_HUMAN
[Raw transfer]




WGZ_A_2(2XNM)
NEK2_HUMAN
[Raw transfer]




ADP_A_2(2WQN)
NEK7_HUMAN
[Raw transfer]




GOL_A_14(2XNO)
NEK2_HUMAN
[Raw transfer]




STU_A_4(2BUJ)
STK16_HUMAN
[Raw transfer]




EDO_A_4(4W9W)
BMP2K_HUMAN
[Raw transfer]




ADP_A_2(2W5A)
NEK2_HUMAN
[Raw transfer]




2 PsiBlast_PDB 98.0499%-128 - C1 -4W9W 6.3 BMP2K_HUMAN
1 PsiBlast_PDB 96.8199%-129 - C1 -4W9X 6.7 BMP2K_HUMAN
3 PsiBlast_PDB 88.0376%-120 - C1 -4WSQ 9.7 AAK1_HUMAN
21 PsiBlast_CBE 86.2976%-121 - C1 -4WSQ 9.6 AAK1_HUMAN
9 PsiBlast_PDB 56.3131%-121 - C1 -2JAV 5.0 NEK2_HUMAN
28 PsiBlast_CBE 54.9931%-125 - C1 -2XKE 4.1 NEK2_HUMAN
23 PsiBlast_CBE 50.6331%-112 - C1 -2XNP 4.8 NEK2_HUMAN
12 PsiBlast_PDB 50.6131%-118 - C1 -2W5A 3.8 NEK2_HUMAN
18 PsiBlast_PDB 50.5031%-117 - C1 -2XK8 4.2 NEK2_HUMAN
25 PsiBlast_CBE 50.3531%-115 - C1 -2XNN 3.8 NEK2_HUMAN
15 PsiBlast_PDB 50.3231%-113 - C1 -2XK4 3.7 NEK2_HUMAN
24 PsiBlast_CBE 50.0331%-116 - C1 -2XNO 3.9 NEK2_HUMAN
16 PsiBlast_PDB 48.8031%-116 - C1 -2XK6 3.7 NEK2_HUMAN
26 PsiBlast_CBE 48.7431%-111 - C1 -2XNM 5.4 NEK2_HUMAN
14 PsiBlast_PDB 46.6331%-111 - C1 -2XK3 3.9 NEK2_HUMAN
10 PsiBlast_PDB 46.3431%-111 - C1 -2W5B 5.6 NEK2_HUMAN