@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : BRAF_HUMAN: (2015-10-04 )
MAALSGGGGGGAEPGQALFNGDMEPEAGAGAGAAASSAADPAIPEEVWNIKQMIKLTQEHIEALLDKFGGEHNPPSIYLEAYEEYTSKLDALQQREQQLLESLGNGTDFSVSSSASMDTVTSSSSSSLSVLPSSLSVFQNPTDVARSNPKSPQKPIVRVFLPNKQRTVVPARCGVTVRDSLKKALMMRGLIPECCAVYRIQDGEKKPIGWDTDISWLTGEELHVEVLENVPLTTHNFVRKTFFTLAFCDFCRKLLFQGFRCQTCGYKFHQRCSTEVPLMCVNYDQLDLLFVSKFFEHHPIPQEEASLAETALTSGSSPSAPASDSIGPQILTSPSPSKSIPIPQPFRPADEDHRNQFGQRDRSSSAPNVHINTIEPVNIDDLIRDQGFRGDGGSTTGLSATPPASLPGSLTNVKALQKSPGPQRERKSSSSSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLPKIHRSASEPSLNRAGFQTEDFSLYACASPKTPIQAGGYGAFPVH

Atome Classification :

(79 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RI9_A_3(4EHG)
BRAF_HUMAN
[Raw transfer]




L1E_B_3(3IDP)

[Raw transfer]




0WP_B_4(4G9C)

[Raw transfer]




L1E_A_4(3IDP)
BRAF_HUMAN
[Raw transfer]




55J_B_4(5CT7)
?
[Raw transfer]




T1Q_A_3(4E4X)
BRAF_HUMAN
[Raw transfer]




FNI_A_3(3PPK)
BRAF_HUMAN
[Raw transfer]




55J_A_3(5CT7)
?
[Raw transfer]




0WP_A_3(4G9C)
BRAF_HUMAN
[Raw transfer]




BR2_A_3(3SKC)
BRAF_HUMAN
[Raw transfer]




1SU_A_3(4KSP)
BRAF_HUMAN
[Raw transfer]




4Z5_A_3(5C9C)
?
[Raw transfer]




SM6_A_3(3PSB)
BRAF_HUMAN
[Raw transfer]




TV4_A_3(3TV4)
BRAF_HUMAN
[Raw transfer]




FNI_B_4(3PPK)

[Raw transfer]




B0R_A_3(3TV6)
BRAF_HUMAN
[Raw transfer]




RI9_B_4(4EHG)

[Raw transfer]




FP4_B_4(3PRI)

[Raw transfer]




RI8_A_3(4EHE)
BRAF_HUMAN
[Raw transfer]




29L_B_4(4MNF)

[Raw transfer]




SM7_B_4(3PSD)

[Raw transfer]




T1Q_B_4(4E4X)

[Raw transfer]




BR2_B_4(3SKC)

[Raw transfer]




SM7_A_3(3PSD)
BRAF_HUMAN
[Raw transfer]




SM5_B_4(3D4Q)

[Raw transfer]




FOI_A_3(3PPJ)
BRAF_HUMAN
[Raw transfer]




FOI_B_4(3PPJ)

[Raw transfer]




CQE_B_4(4CQE)
?
[Raw transfer]




RI8_B_4(4EHE)

[Raw transfer]




NG7_A_3(4AGW)
SRC_CHICK
[Raw transfer]




2VX_A_3(4PP7)
BRAF_HUMAN
[Raw transfer]




NG7_B_6(4AGW)
SRC_CHICK
[Raw transfer]




B1E_B_4(4G9R)

[Raw transfer]




SM5_A_3(3D4Q)
BRAF_HUMAN
[Raw transfer]




DFS_B_4(4MBJ)

[Raw transfer]




10Z_A_4(4H58)
BRAF_HUMAN
[Raw transfer]




SM6_B_4(3PSB)

[Raw transfer]




TV4_B_4(3TV4)

[Raw transfer]




STI_A_2(4CSV)
?
[Raw transfer]




29L_A_3(4MNF)
BRAF_HUMAN
[Raw transfer]




B0R_B_4(3TV6)

[Raw transfer]




B1E_A_3(4G9R)
BRAF_HUMAN
[Raw transfer]




STI_B_6(3OEZ)
SRC_CHICK
[Raw transfer]




BAX_A_3(1UWH)
BRAF_HUMAN
[Raw transfer]




FP4_A_3(3PRI)
BRAF_HUMAN
[Raw transfer]




FP3_B_4(3PRF)

[Raw transfer]




CQE_A_3(4CQE)
?
[Raw transfer]




2VX_B_4(4PP7)

[Raw transfer]




BAX_B_4(1UWH)

[Raw transfer]




032_A_3(3OG7)
BRAF_HUMAN
[Raw transfer]




B96_B_5(4JVG)
BRAF_HUMAN
[Raw transfer]




B96_C_7(4JVG)
BRAF_HUMAN
[Raw transfer]




B96_D_8(4JVG)

[Raw transfer]




BAX_A_3(1UWJ)
BRAF_HUMAN
[Raw transfer]




FP3_A_3(3PRF)
BRAF_HUMAN
[Raw transfer]




DFS_A_3(4MBJ)
BRAF_HUMAN
[Raw transfer]




B96_A_6(4JVG)
BRAF_HUMAN
[Raw transfer]




BAX_B_4(1UWJ)

[Raw transfer]




STI_A_3(3OEZ)
SRC_CHICK
[Raw transfer]




SM5_B_4(3OMV)

[Raw transfer]




324_A_3(3C4C)
BRAF_HUMAN
[Raw transfer]




324_B_4(4WO5)

[Raw transfer]




324_B_4(3C4C)

[Raw transfer]




SM5_A_3(3OMV)
RAF1_HUMAN
[Raw transfer]




ANP_B_2(2SRC)
SRC_HUMAN
[Raw transfer]




RXT_B_4(4U5J)
SRC_CHICK
[Raw transfer]




734_A_3(4E26)
BRAF_HUMAN
[Raw transfer]




RXT_A_3(4U5J)
SRC_CHICK
[Raw transfer]




734_B_4(4E26)

[Raw transfer]




831_A_3(3II5)
BRAF_HUMAN
[Raw transfer]




PD5_A_3(3QLF)
SRC_CHICK
[Raw transfer]




831_B_6(3II5)

[Raw transfer]




I76_B_4(4DGG)
SRC_CHICK
[Raw transfer]




HET_B_2(2BDJ)
SRC_HUMAN
[Raw transfer]




STU_A_3(3P86)
CTR1_ARATH
[Raw transfer]




ATP_B_3(2Y4I)

[Raw transfer]




ACP_A_2(4UEU)
?
[Raw transfer]




STU_X_2(3A4O)
LYN_HUMAN
[Raw transfer]




RSW_A_3(3Q4C)
BRAF_HUMAN
[Raw transfer]




50 PsiBlast_CBE 93.92100%-121 - C2 -5CT7 11.6 ?
49 PsiBlast_CBE 93.27100%-120 - C2 -5CT7 11.5 ?
5 PsiBlast_PDB 93.21100%-117 - C2 -3PSB 7.5 BRAF_HUMAN
17 PsiBlast_PDB 92.85100%-118 - C2 -4G9C 9.5 BRAF_HUMAN
51 PsiBlast_CBE 92.84100%-122 - C2 -4H58 7.3 BRAF_HUMAN
21 PsiBlast_CBE 92.7699%-118 - C2 -4MNF 7.7
48 PsiBlast_CBE 92.66100%-118 - C2 -4KSP 9.8 BRAF_HUMAN
40 PsiBlast_CBE 92.4999%-117 - C2 -5C9C 9.9 ?
26 PsiBlast_CBE 92.31100%-120 - C2 -4G9C 9.9
15 PsiBlast_PDB 92.27100%-116 - C2 -4E26 5.1 BRAF_HUMAN
27 PsiBlast_CBE 92.22100%-115 - C2 -4EHE 8.2
29 PsiBlast_CBE 92.18100%-118 - C2 -4E26 3.7
38 PsiBlast_CBE 92.10100%-115 - C2 -3PPJ 7.4
7 PsiBlast_PDB 92.03100%-121 - C2 -3PPK 9.0 BRAF_HUMAN
11 PsiBlast_PDB 92.01100%-117 - C2 -3PSD 8.3 BRAF_HUMAN
44 PsiBlast_CBE 91.8599%-117 - C2 -3IDP 10.8
16 PsiBlast_PDB 91.84100%-123 - C2 -4E4X 9.9 BRAF_HUMAN
8 PsiBlast_PDB 91.68100%-122 - C2 -3PRF 8.3 BRAF_HUMAN
36 PsiBlast_CBE 91.63100%-119 - C2 -3PRF 7.3
6 PsiBlast_PDB 91.62100%-115 - C2 -3PPJ 7.6 BRAF_HUMAN
24 PsiBlast_CBE 91.61100%-119 - C2 -3II5 10.1
13 PsiBlast_PDB 91.54100%-119 - C2 -3TV4 7.8 BRAF_HUMAN
1 PsiBlast_PDB 91.4799%-115 - C2 -4MNF 7.4 BRAF_HUMAN
33 PsiBlast_CBE 91.29100%-116 - C2 -3PSD 8.2
47 PsiBlast_CBE 91.24100%-122 - C2 -4MBJ 5.1 BRAF_HUMAN
31 PsiBlast_CBE 91.19100%-117 - C2 -3TV4 7.8
10 PsiBlast_PDB 90.99100%-119 - C2 -3Q4C 7.9 BRAF_HUMAN
43 PsiBlast_CBE 90.8799%-119 - C2 -4EHG 7.7 BRAF_HUMAN
19 PsiBlast_PDB 90.56100%-117 - C2 -4PP7 9.1 BRAF_HUMAN
30 PsiBlast_CBE 90.53100%-116 - C2 -3TV6 8.6
39 PsiBlast_CBE 90.50100%-117 - C2 -3D4Q 6.6
45 PsiBlast_CBE 90.4499%-117 - C2 -3IDP 10.8 BRAF_HUMAN
37 PsiBlast_CBE 90.26100%-117 - C2 -3PPK 8.4
52 PsiBlast_CBE 89.9899%-118 - C2 -1UWH 9.0
34 PsiBlast_CBE 89.93100%-117 - C2 -3PSB 7.7
12 PsiBlast_PDB 89.89100%-121 - C2 -3SKC 8.6 BRAF_HUMAN
14 PsiBlast_PDB 89.85100%-118 - C2 -3TV6 8.4 BRAF_HUMAN
53 PsiBlast_CBE 89.7199%-117 - C2 -1UWH 9.1 BRAF_HUMAN
42 PsiBlast_CBE 89.6799%-120 - C2 -4EHG 8.7
32 PsiBlast_CBE 89.39100%-113 - C2 -3SKC 9.3
28 PsiBlast_CBE 89.19100%-115 - C2 -4E4X 9.5
4 PsiBlast_PDB 89.17100%-115 - C2 -3D4Q 7.0 BRAF_HUMAN
46 PsiBlast_CBE 89.02100%-117 - C2 -4MBJ 7.1
25 PsiBlast_CBE 88.71100%-114 - C2 -4PP7 9.2
18 PsiBlast_PDB 88.58100%-117 - C2 -4EHE 8.0 BRAF_HUMAN
63 PsiBlast_CBE 88.5793%-118 - C2 -3OG7 9.8 BRAF_HUMAN
64 PsiBlast_CBE 88.4894%-116 - C2 -4CQE 11.4 ?
3 PsiBlast_PDB 88.23100%-114 - C2 -3II5 10.4 BRAF_HUMAN
62 PsiBlast_CBE 87.8394%-115 - C2 -4WO5 3.0
41 PsiBlast_CBE 87.7099%-111 - C2 -4G9R 10.9
58 PsiBlast_CBE 87.6494%-118 - C2 -4JVG 9.1 BRAF_HUMAN
35 PsiBlast_CBE 87.25100%-115 - C2 -3PRI 7.7
9 PsiBlast_PDB 87.25100%-115 - C2 -3PRI 7.5 BRAF_HUMAN
20 PsiBlast_PDB 87.2199%-111 - C2 -4G9R 10.8 BRAF_HUMAN
65 PsiBlast_CBE 86.6894%-112 - C2 -4CQE 11.7 ?
54 PsiBlast_CBE 86.5399%-108 - C2 -1UWJ 8.8
57 PsiBlast_CBE 85.9094%-114 - C2 -4JVG 8.4 BRAF_HUMAN
59 PsiBlast_CBE 85.4894%-116 - C2 -4JVG 8.4 BRAF_HUMAN
56 PsiBlast_CBE 85.4794%-114 - C2 -4JVG 8.6
60 PsiBlast_CBE 84.8094%-116 - C2 -3C4C 6.1
61 PsiBlast_CBE 84.7194%-106 - C2 -3C4C 8.2 BRAF_HUMAN
55 PsiBlast_CBE 84.0499%-110 - C2 -1UWJ 9.4 BRAF_HUMAN
67 PsiBlast_CBE 83.5977%-117 - C2 -3OMV 4.4 RAF1_HUMAN
66 PsiBlast_CBE 82.8077%-119 - C2 -3OMV 6.4
69 PsiBlast_CBE 63.2436%-109 - C2 -3P86 5.6 CTR1_ARATH
96 PsiBlast_CBE 61.2733%-109 - C2 -4DGG 7.7 SRC_CHICK
90 PsiBlast_CBE 61.0433%-106 - C2 -4U5J 4.3 SRC_CHICK
76 PsiBlast_CBE 60.5733%-100 - C2 -2SRC 5.1 SRC_HUMAN
71 PsiBlast_CBE 60.0236%-105 - C2 -4CSV 9.9 ?
99 PsiBlast_CBE 59.7533%-106 - C2 -4AGW 8.3 SRC_CHICK
91 PsiBlast_CBE 59.2533%-106 - C2 -4U5J 4.8 SRC_CHICK
87 PsiBlast_CBE 59.0433%-111 - C2 -3QLF 6.7 SRC_CHICK
98 PsiBlast_CBE 57.6033%-105 - C2 -4AGW 7.5 SRC_CHICK
89 PsiBlast_CBE 56.6933%-102 - C2 -3OEZ 9.1 SRC_CHICK
88 PsiBlast_CBE 56.6633%-100 - C2 -3OEZ 8.3 SRC_CHICK
70 PsiBlast_CBE 56.2536% -96 - C2 -4UEU 3.6 ?
73 PsiBlast_CBE 55.5633%-105 - C2 -2BDJ 8.6 SRC_HUMAN
68 PsiBlast_CBE 55.2436% -92 - C2 -2Y4I 4.9
80 PsiBlast_CBE 51.5035%-100 - C2 -3A4O 4.7 LYN_HUMAN