@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : BRSK1_HUMAN: (2015-10-04 )
MSSGAKEGGGGSPAYHLPHPHPHPPQHAQYVGPYRLEKTLGKGQTGLVKLGVHCITGQKVAIKIVNREKLSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLTPKEARKFFRQIVSALDFCHSYSICHRDLKPENLLLDEKNNIRIADFGMASLQVGDSLLETSCGSPHYACPEVIKGEKYDGRRADMWSCGVILFALLVGALPFDDDNLRQLLEKVKRGVFHMPHFIPPDCQSLLRGMIEVEPEKRLSLEQIQKHPWYLGGKHEPDPCLEPAPGRRVAMRSLPSNGELDPDVLESMASLGCFRDRERLHRELRSEEENQEKMIYYLLLDRKERYPSCEDQDLPPRNDVDPPRKRVDSPMLSRHGKRRPERKSMEVLSITDAGGGGSPVPTRRALEMAQHSQRSRSVSGASTGLSSSPLSSPRSPVFSFSPEPGAGDEARGGGSPTSKTQTLPSRGPRGGGAGEQPPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPPSPGGGVGGAAWRSRLNSIRNSFLGSPRFHRRKMQVPTAEEMSSLTPESSPELAKRSWFGNFISLDKEEQIFLVLKDKPLSSIKADIVHAFLSIPSLSHSVLSQTSFRAEYKASGGPSVFQKPVRFQVDISSSEGPEPSPRRDGSGGGGIYSVTFTLISGPSRRFKRVVETIQAQLLSTHDQPSVQALADEKNGAQTRPAGAPPRSLQPPPGRPDPELSSSPRRGPPKDKKLLATNGTPLP

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4FG9)
KCC1A_HUMAN
[Raw transfer]




ATP_A_3(4FG8)
KCC1A_HUMAN
[Raw transfer]




ATP_A_2(4FG7)
KCC1A_HUMAN
[Raw transfer]




GVD_B_8(2VN9)
KCC2D_HUMAN
[Raw transfer]




5CP_B_6(3BHH)
KCC2B_HUMAN
[Raw transfer]




GVD_A_7(2VN9)
KCC2D_HUMAN
[Raw transfer]




ATP_B_4(4FG9)
KCC1A_HUMAN
[Raw transfer]




5CP_A_5(3BHH)
KCC2B_HUMAN
[Raw transfer]




ATP_B_4(4FG8)
KCC1A_HUMAN
[Raw transfer]




K88_A_3(2WEL)
KCC2D_HUMAN
[Raw transfer]




B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]




DXR_B_4(3MA6)
?
[Raw transfer]




B49_D_8(2Y7J)
PHKG2_HUMAN
[Raw transfer]




ADP_A_7(2RIO)
IRE1_YEAST
[Raw transfer]




TAK_A_2(3AQV)
AAPK2_HUMAN
[Raw transfer]




DRN_A_2(2V7O)
KCC2G_HUMAN
[Raw transfer]




CPS_B_12(4CZT)
CIPKN_ARATH
[Raw transfer]




CPS_A_5(4CZU)
CIPKN_ARATH
[Raw transfer]




CPS_A_5(4CZT)
CIPKN_ARATH
[Raw transfer]




CPS_B_10(4CZU)
CIPKN_ARATH
[Raw transfer]




CPS_C_16(4CZU)
CIPKN_ARATH
[Raw transfer]




EDO_A_5(2WEL)
KCC2D_HUMAN
[Raw transfer]




EDO_A_4(2WEL)
KCC2D_HUMAN
[Raw transfer]




24 PsiBlast_CBE 75.8649%-122 - C3 -3AQV 8.0 AAPK2_HUMAN
100 PsiBlast_CBE 71.7836%-115 - C3 -3BHH 5.5 KCC2B_HUMAN
99 PsiBlast_CBE 70.8436%-115 - C3 -3BHH 5.9 KCC2B_HUMAN
115 PsiBlast_CBE 69.4636%-128 - C3 -2Y7J 5.5 PHKG2_HUMAN
107 PsiBlast_CBE 68.7435%-109 - C3 -2V7O 6.0 KCC2G_HUMAN
74 PsiBlast_CBE 68.6736%-111 - C3 -2VN9 6.5 KCC2D_HUMAN
25 PsiBlast_CBE 68.4743%-109 - C3 -4CZT - CIPKN_ARATH
75 PsiBlast_CBE 68.4036%-111 - C3 -2VN9 6.0 KCC2D_HUMAN
73 PsiBlast_CBE 68.2539%-132 - C3 -4FG7 4.3 KCC1A_HUMAN
63 PsiBlast_CBE 68.0936%-125 - C3 -2WEL 5.2 KCC2D_HUMAN
29 PsiBlast_CBE 67.7142%-112 - C3 -4CZU - CIPKN_ARATH
30 PsiBlast_CBE 67.5942%-117 - C3 -4CZU 5.6 CIPKN_ARATH
114 PsiBlast_CBE 67.3436%-130 - C3 -2Y7J 5.6 PHKG2_HUMAN
31 PsiBlast_CBE 67.2442%-112 - C3 -4CZU 5.8 CIPKN_ARATH
28 PsiBlast_CBE 66.7043%-105 - C3 -4CZT 5.1 CIPKN_ARATH
27 PsiBlast_CBE 66.6043%-113 - C3 -4CZT 4.1 CIPKN_ARATH
32 PsiBlast_CBE 66.5042%-112 - C3 -4CZU 5.4 CIPKN_ARATH
26 PsiBlast_CBE 65.8943%-116 - C3 -4CZT - CIPKN_ARATH
69 PsiBlast_CBE 62.3039%-128 - C3 -4FG8 4.0 KCC1A_HUMAN
70 PsiBlast_CBE 61.5339%-140 - C3 -4FG8 5.0 KCC1A_HUMAN
72 PsiBlast_CBE 60.2539%-136 - C3 -4FG9 5.9 KCC1A_HUMAN
106 PsiBlast_CBE 59.7537%-117 * C3 *3MA6 5.7 ?
71 PsiBlast_CBE 59.4039%-130 - C3 -4FG9 5.2 KCC1A_HUMAN